XLOC_031518 (gene) - C. hemisphaerica

Overview
NameXLOC_031518
Unique NameXLOC_031518
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_165:198284..206870-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031518 ID=XLOC_031518|Name=XLOC_031518|organism=Clytia hemisphaerica|type=gene|length=8587bp|location=Sequence derived from alignment at scaffold_165:198284..206870- (Clytia hemisphaerica)
CAGGTGAAAACAAATTAACAGAGTTAGCTCGTATGGTTGTTCTTGACGGG
CAAAATGAGGTATAAAGTGTAATTTGATTTGAAATTTCAGCCCCTTCTAA
ATGGGTGGCATTTCTGAAACTTCAAAAGACTTTTTGGTCTCTTTTTGGAA
AAGTTTGAAGTGTAATTGAATGTTTTAGAATTCTTTCGAATTTATTTTCC
ATCCTTTACAATCTGAAAGAACATATTAACAAAATTACTTAGCTTTCAAC
AGTTTCAACAAATTCTTTTTCAGTAATCCGATTTCCCAAAGTTTGTAGGA
GGTGATGGAAAGATGGTTCCTATCTCCACTTTAAACTACCACTTCACTTC
TTCTATTTTATTTTATCTTTCAGCTCAGCCAAATCGATATTTGCTCTGAA
TGCTATATTCGCTCTAACGACAGAATGAAGAATTGGTTTTCGATCCCATG
TGTGAGTATCATTGTAATTTTTTGCTTTTCTGACCTCGTTCCTGAAGTTG
CTATTAAAAATCGTGGAACCTTTCGTAATTTTTTCATGTTTTTTTAGGCT
TCTTTGCTTTTGGGGCCTACCTAAGGAGGTCCTATAAATTGACCGTTAAT
GTTAATGTTTATATTCTTTCTCAAGTCGAAAAATATGTACAAATCTGTAC
TATCTTTAAAGCTAATAGAGTTCAACCGTTGTGTGTCCGTTTGTTCGTTC
ATTTGTTCTTTATGAGAACTTTTCAACATTAGCCCGTTATAAATTTTCAT
TTGCATTCTTTCTTCAAACCTTCATAGTGCGACCTCGTTATATTAACGTA
AAAGTCTTGTCTATCAAGGTTTAACGGTAGGTTCACACTTTCATCACGAC
TAATGTTTTATTTAAAACATCTATTGTTTCGTTAACTTTCTAGATACCAG
AACACAGAATCGTATATGCAAAACTTGGAACAGATCCACCTTGGCCGGCC
AAGGTATTTCACTACTGAATTCATAAATTGTTCATCTCTGACTTTTTGAA
ATAAAGTAAATTTTGACGCTTCTAAAGCCGCTATCTAATTCGAAATATAT
CAAAAGTAATACGCAATTGAAAATTTACTGCCAGCTAATTTGAAATATAT
TAGATGATTTATATTCTTCTCGTAGTAGTGTGCGTGATCTAATTTTTGTC
AAAACCAGGGTTTTTAGACAATGGCCACCACCCTTTTTTTAACCTATGTA
CTTGACTACCATTATACTGTTTGTTACTGGACTTGGTTTGCCGTCACCCG
ACTGACTAACTGAATCTCGAAATTGTCGACCCAAAAAGATTTATTGCCAT
TTTAAAGAAGAATTTACCAGATTTGATGACCCTTTGAGGGGCTTCGTATC
ATTTGATATTGTAACTTGATATCAGATTTTTTATTGTAATAAATTCTGTG
CAGGTGTTACGTGAAAACGAAGACGGTTCCAGCATTGACGTTCGATTCTT
TGGAAATCCATATCAAAGGTATTGAGCACACGTTTACTTAGATCTCATCT
GTTCAAATTATTTAACCAAAGTTTTTTTTTTCATCTGCTTGCTAAATATA
ATCTTCGCTGTAAAAGCATGTCCTGTTGGAATCTTTATGCCCTAGAAATC
CTTAAAAAATCGAAAGTTTCGAACCATCTATCAGGCCATCCTAGAAAAGC
ATGGTAGTGTTTTTCAACTAAAAAGACTGATTTTACCAGCATTTTTAGTG
ATTACTGGAGGGTTAGCGTCTAGGGCATATGAAAAAAAAGCCTGTCTTTA
GTGGGCTGCACTGATATCTAAAGGAAGTAAATTAGTCCTGTTTGTTAATC
CGTACGAATTAAAGGAATGATGGTCTAATTAACTTTCTAATTAACACAGA
GCATGGATACCGAATCGAAAACAAAACATCTGGGATCTCGACGAAAAACC
ACAACCGAAGAAACGTTCTAAAGCTCTCTCGCTTGCCGAAGAAGAACTCA
AAGTCTACTTACGTCTATTAGCCAGGAGCAAGTCCTCTGCTAAGGTATAT
TGATCACGTATAGGCTATTTCACGGTCGAAATGGATCATGGGTAATCAGG
ACCACCGCGCTCCGATAGCTACTTTCTGTTGGTCTAATTTTTTGGATGTT
TTTGCGTCTAGCCAGCGGGAAACCGTTATTGAGGCGCAACCGGTCCTGGT
CACAGATGATTCATTTCAACTGTGAGATGGCCTATTCATAAACATTCATC
ATCCAATTCCAATCATACGGCTGTAACCTAAANATCACACATGATTCATT
TCAACTGTAGTGAGATGGCCTATTCTTAAATATTCATCATCCAATTCCAA
TCAAACGTCTGTAACCTAAAAAAAAAAACAGGGAAAATATAAAGAAATGA
AAATTTTGCTTTTGAAGGATTGACTTCGACATCAGTCTTTGCATTCCCGA
CACAAAAAAATCTTTCTCCTACTTTTTATGATTTTTCCTTCTTTTCAAGT
ATTCTTCAAACATCTCCTGTGCTTTAATATCTTTGATGAGTTATTACAGA
TTATACTCTAAAATGAGACATAAAATTGACTATCTAGTTAGTCTTGGATT
AAAAGATATCCAAATGCTCTAATTAGCATATTTCCATGGTGGGCAAAAGC
TGTTTATATGGAGGTGGTCTGGCCCAGCTAGGTGAGGTGGGATGGATTTT
CGAACGTTTCGTCACAGTTTTTGACGAATCAAATGGCTAGAAATAGATTA
TGTGGCGTTCGAAAATCTATCCCACCTCACCTAACCTCCATATGAACAGT
CCCTTAGAAGAATATAAATCAAATCAACGGAGATACTGTTTAATACATTC
TGATCAATCGTATTTACTTTCCTTTCTAAAGAGCGGTAAAGTAACATCCT
CGGATTCATCTGAAGAAGAAGAAATCGACGACTCAGACGACCAACAACCT
GAAAAAGAAACTAAATCATCTTTCACCAAGGTCAAAACACCCGCCAAGAA
AGCCGCAACACCCTCTTCTGCTTCCAAATCTTCGTCTCGGGGTCGAAAAC
GAACGCCCGCTGCCTCCAAGCCGCAGACTGAATCTGACGAAGACGAAGAA
GAAGAAGAATTGGCGGACGAAAGCAAAAGCGAAAGCGAAAGTGAAAGTGA
CAGCGATGGAGAATTCCAACCGCCACAGAAACGTAACAAAAAGAAAGACA
CCAAACGAAAATCGCGCGACGACTCGCAGTGTAAGAAACAACGTGGCCGA
AAGCGAGGAAGTGGCGTGAAACGAAAAACAACGTCGCCCGACGGAGCATC
CTCCTCGTCTGCCAAAGAAACGAAAGCCGAGCGACGTTTCCGCGAGATGC
AAGAAAAGAAAATGATGGAATTTCAAAAAAACAAAGGTAGCAAAAACTAT
AATAAAAACGAACAGAAAGTTGATATTAATAAAAACATTGGTAGTGAAGA
CGGTGGTGATGATTCTTCTGAGATGCAGTTGGCGCAACAGATCAAAATGA
CCGACGACTATAAGATGATTGAAAAATTACAAGATCGCGTTCGAACGATG
GAAAAATCGTTAGAGCAAACGAAAGGCGAGTACGAGGCTGCACAGGCTGA
CCTTGAGTCCACGCGCATCGACTTGGCGACCGAACGACAGAAATGTAAAA
GGTTGCAAGAACAAGTGGAAAAGGACGTCGCGATCGGTGAAGAGAAAATG
CGCGCGGAAATGTTGAGTAAGAAACAAGAAGANACCTCCATATGAACAGT
CCCTTAGAAGAATATAAATCAAATCAACGGAGATACTGTTTAATACATTC
TGATCAATCGTATTTACTTTCCTTTCTAAAGAGCGGTAAAGTAACATCCT
CGGATTCATCTGAAGAAGAAGAAATCGACGACTCAGACGACCAACAACCT
GAAAAAGAAACTAAATCATCTTTCACCAAGGTCAAAACACCCGCCAAGAA
AGCCGCAACACCCTCTTCTGCTTCCAAATCTTCGTCTCGGGGTCGAAAAC
GAACGCCCGCTGCCTCCAAGCCGCAGACTGAATCTGACGAAGACGAAGAA
GAAGAAGAATTGGCGGACGAAAGCAAAAGCGAAAGCGAAAGTGAAAGTGA
CAGCGATGGAGAATTCCAACCGCCACAGAAACGTAACAAAAAGAAAGACA
CCAAACGAAAATCGCGCGACGACTCGCAGTGTAAGAAACAACGTGGCCGA
AAGCGAGGAAGTGGCGTGAAACGAAAAACAACGTCGCCCGACGGAGCATC
CTCCTCGTCTGCCAAAGAAACGAAAGCCGAGCGACGTTTCCGCGAGATGC
AAGAAAAGAAAATGATGGAATTTCAAAAAAACAAAGGTAGCAAAAACTAT
AATAAAAACGAACAGAAAGTTGATATTAATAAAAACATTGGTAGTGAAGA
CGGTGGTGATGATTCTTCTGAGATGCAGTTGGCGCAACAGATCAAAATGA
CCGACGACTATAAGATGATTGAAAAATTACAAGATCGCGTTCGAACGATG
GAAAAATCGTTAGAGCAAACGAAAGGCGAGTACGAGGCTGCACAGGCTGA
CCTTGAGTCCACGCGCATCGACTTGGCGACCGAACGACAGAAATGTAAAA
GGTTGCAAGAACAAGTGGAAAAGGACGTCGCGATCGGTGAAGAGAAAATG
CGCGCGGAAATGTTGAGTAAGAAACAAGAAGAAATCGACCTCGCCATTGA
AGAAGAACGGAAGCGAAACGAACTGGAATTTCAGAGTCGGATGAACGAAG
CCATTATGGAAGAACGGTCAAAAGGCGAAAACAAATTCCAAGAAACTCTT
GAAAAAGGTATCTATTTCGCAGAAAGTATTTTTTCACCACTTTCCCACTG
ATGGATCGACCAATGTTTAAGTTTGAATTACAGAAGTTTTAGAATAATAT
AGGTTTATTGGGGAAAAGTTAACTGTAATCCCATCAATTTCGTATACTTA
TGCGGTGATATTTTCTCGGAACTTGTTAAAGCAAACTAGACGCTACATAA
TCTCGTAGGCATACGTTGGGAGTTGTTTTGGATTTTAAGAATTACACATT
TTTCAGAATTCGATTTTCTGTGACTTTTGAGATTTTATCGAGACTCTTGT
GGCCATTGTTTGATGGATATTTTTTGAGCTTTCAGATCTTCCAATAGATA
TTTAGGAAGTTTCTGAGAATTTTTATTCTTCTGTTACTTTTTTCGCGGTA
AGTTTTGAAAGTTTTCGACGTGTTGTTCTGCGTTGTCCTTATATTTTTGT
GTGTTTATTTTTATGGAGATTATTTCAATTCTTGGTCATTATGAACTCAT
TTGTCTTCTAGAACGCGTCAATTCGGAAAACAAAGCCAAGATGATGTGGC
AACGCGAACGCGACGAATTGCAACGAACTTTCGATCGATACAAAACCGAA
TTGGAAGTGAAAAATTCTCGTGGTATGGAAAAACTGAAACTCGAGTCGGA
CGAGCTGATGAAGCGAACGCTAGCGGACAACATGAGGCGTATCCAAGCTG
ACACTGAACGTATTTTAGCGGCCGCCAAAAAGAAATCGTGGTGTTCCAAT
TGCACGAAAGAGGTAAGATTTTCTCCTTTCGCTTCAGAATGATTTTCAGA
TTCGTAATTTCCCAGAGATATTGGGAATTGAGAAGTCTCGATATAATCTC
AGTGTGGGCATGTTTCTTGACCAAAAATCTACCGGGTGCGCCACAAAAAG
GTATCCAGTCTAAAACCAAAAATCTGAGGAAAATTTCGTTAAAAGTAAAT
TGAAATGATTTTGATGAACATTTTAAACCCTTTCTTTCCATCACCATCAG
TTTCAAAATTCATTTGTTTAATTACTGAAAAATGATCTTAATCATGTAAA
GCCTCTTGCGATTGCCAATTTTAAAACTAAAGTTTGATAGGTCGATTTTT
AACGTTTTCGGGCACTTTCTGAAAGTAACTTTTTTATTCGATTGAGCTTA
ACTTTTGATCTAATGAATCGAATTTAATAAATGAACCATCAAAATTTAAG
TTTATTTTTCTTCTTTCTGATGGAATAGGAATGGTTGTTTCTTAATTCTT
AGATTTTGAAAAAATCAGTTTCAAAGAGAGAAACTTTTTAATGGCGCACC
CGGTACAAGGTTTTACTCTCAGAATGATGATCGAAAAGGAACCCTTTTGG
ATTGAAAAAAGTATTAATAGAGAATTGATTAGACTGATTAGAAAAATACT
TTACTCCCAAAAATGTTACCAACTTAATTTTTATGGACACCCGCTATCAA
AATCTAGAAGGATTCTTTTATAGTTGTCAACTTTTTTACACCTGACCTCA
ATTTATGATATGCGTGAGTCTTTTTTCTATAACGGAAACACCCGAAAAAA
GCCGGGATTTAAGTACCTAAAAAGCGATGAAGCCCGATTTTCGAAAAAAA
ATTCGCACACCAGATACGGAGATGTCCCGGAAAAAGCGGTTTTAGGGATT
TTCTCGAGATTTTCTCATTGGTTTTTCTGACGTTTTGTTTATTTGGAATT
CAAATTCTTCTGGTGATCAGCCAGGTAGGTCCATAAAAGTATCACTTATT
TCTCTTTTTTTTTTGTCAGGCGTTTTATCATTGTTGCTGGAACACGAATT
ACTGTTCGACAGATTGCCAGCGTGTTCATTGGGTGTCACATCGCTACCAG
TGCACGCGTGAGATGATGTCAACGTGCCGTTCGTGTCAACAACGTCAAAA
CTTCCCAGGTGGGTTTCCTTCGCAAGTTCCTCCAAAATAATCTCGCCTCT
GCTGGTCACCAGTTTGTTTTTTAAGTATTAATCCTTAAAATGTACATATT
ATCATGGTATATAAAGAAATTAAAAAAGGATGGGCCTTGTTGTAGTAGAT
CCTCTGTAAATGAATGAATATTGAACGCGCATGAATGAGTAAATTATTGA
ATGAATGGATAGAAATATAGATAGAGGTATGGATGAAAGCATAAACGAAA
CGAATGAATGATGGAATGAATGGATATAAAGAGAATGTTTGATGTACATT
ACCTCGATGGAAATTCTTTTTCTCAGAGCTTACTCCGGAGAGTCACACTT
TCTCTTAGAACTGAATGGAGGAAAATTGTATTTTACGCAATGTTTTTTTT
GTTTGCTATCTAAAGTTGAAGGTTTTATTTTTACATAAGTGTTCCCGTTT
CATATCAGACCCGTATATTATATCAGGACGGTGCCTGCCTATTGTTATAT
TATGCTGATATAAGCAAAAAAGTGTTTTTCTTTTCCTCTTTCTGACCAAT
CTTGCTCCACATCCGTATGCAATCTAATGTGAAAAAGCTTATAAATAAAA
ATTGATGAGCAAGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTA
ATGGGCTCTTCCAGAAAAAAAATTGTATATGGGGGGTGGAGGATAAACAA
TTTTCAGTGATTTATCCCCCGGACAAAGTGACTTTTGACCCCCCGGACAA
CGGGTTTCACCCCCCGGACAACGGGTTTCACCCCCCGGACAACGGGTTTC
ACCCCCCGGACAAGCGTCAGCTGACCCCCGGACAGAGCAAAATTATCCCC
TGGAAAAAAATTGACGAATTTTTACTACCCCCCGGACAATATATCCTCCA
CCCGGGGTGTACGAACTTTTTCTGGAAGAGCCCAATCCTTTATGTTCTCA
TCGAATGTTTTTAAGTAAAAATTTGGAAATCTTTCTCTTGGTTGCACTAT
TTTGATGCGAATCTCGAACTAAAATGATTTTCCTAAAAAAATGATTAAAC
AAGAAGTTATGTTTAGGCCAGCGCATGAATATTACTAGATTATATATATT
TGACTATACAGTAGGTTATGTTATTCCACTATGTAATACTTTAGGCGTTT
AACCTTCGCGAACAGAAACTTTCGCGATGCTTTTGAAATTGTGCGAAAGT
TTGTGTAGGTCATACAATACTTGGAAATCGTAATTTTAAAATTTTTAGCC
CTTGTAGCCTTCTTTAAAGTCAATGAATAACTGTTTTGAAATTGACTTCA
AACAGAATTTTTCATAATTAAGCTAATTTTATTTTACAATTTTCATTTAT
CCTCAAACTGGCGAAAATTTGTGGTAAAATTCGCAATTTTCGATTTCTCG
CGACAGTTTGTGTTCCCGAAAGTTTATACGCCTTAAGTATATAATCGAGA
CAAAAGCTGTTTTGTACTAACATACTACTTTCAGAATTTCTTTTAATTAA
TTATGCCCCTATTTTTACATCAATGATTGTCTATTTTTCCCTTATTTTTA
TTATCATTTTTTTTTACTCCTCCGCAATGCCTTCCAGAAATTTTAAAGAT
TCATGGGTCAGATTTCCAAACGATTTTCTATACAAATGGTCAGTTCCTCT
CCCTATATTTGTAAAGTGTATTTTCAGTCCATTACGTATTTTTCACTTCA
TATTAAGACAGACTTACAATTTTCCAATATTTCTTGAATGATTTTATCCG
AGGGCGAATTAGCTTTTCTGGTGGTTGTGGGTTTTAGTTTTAGGTCTTAT
CTTTTTTATATCTTAAATTTTTTTATTTATACACTTTTGTTTTCTTTTTT
TTTTAAGATTTTGCTGTAAGTTATCAGGAAGCGATTGATTTTTTATGTTT
TTACAATGTCTAAATATAATAATAATGGAAATGTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049709TCONS_00049709Clytia hemisphaericatranscript
TCONS_00049708TCONS_00049708Clytia hemisphaericatranscript
TCONS_00049707TCONS_00049707Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049707-proteinTCONS_00049707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_165supercontigscaffold_165:198284..206870 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.71	4.06	2.23	3.08	110.45	87.29	64.95	70.26	41.3	45.31	38.32	34.38	31.19	34.5	23.02	26.25	40.96	38.88	20.29	22.78	29.67	31.7	14.49	19.65	30.94	33.93	18.06	17.29	19.05	19.52