TCONS_00049707-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049707-protein
Unique NameTCONS_00049707-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length608

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049707-protein ID=TCONS_00049707-protein|Name=TCONS_00049707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=608bp
GENKLTELARMVVLDGQNELSQIDICSECYIRSNDRMKNWFSIPCIPEHR
IVYAKLGTDPPWPAKVLRENEDGSSIDVRFFGNPYQRAWIPNRKQNIWDL
DEKPQPKKRSKALSLAEEELKVYLRLLARSKSSAKSGKVTSSDSSEEEEI
DDSDDQQPEKETKSSFTKVKTPAKKAATPSSASKSSSRGRKRTPAASKPQ
TESDEDEEEEELADESKSESESESDSDGEFQPPQKRNKKKDTKRKSRDDS
QCKKQRGRKRGSGVKRKTTSPDGASSSSAKETKAERRFREMQEKKMMEFQ
KNKGSKNYNKNEQKVDINKNIGSEDGGDDSSEMQLAQQIKMTDDYKMIEK
LQDRVRTMEKSLEQTKGEYEAAQADLESTRIDLATERQKCKRLQEQVEKD
VAIGEEKMRAEMLSKKQEEIDLAIEEERKRNELEFQSRMNEAIMEERSKG
ENKFQETLEKERVNSENKAKMMWQRERDELQRTFDRYKTELEVKNSRGME
KLKLESDELMKRTLADNMRRIQADTERILAAAKKKSWCSNCTKEAFYHCC
WNTNYCSTDCQRVHWVSHRYQCTREMMSTCRSCQQRQNFPDFAVSYQEAI
DFLCFYNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031518XLOC_031518Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049707TCONS_00049707Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR002893Znf_MYND
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 348..396
NoneNo IPR availableCOILSCoilCoilcoord: 470..497
NoneNo IPR availableGENE3D2.30.30.140coord: 47..123
e-value: 1.5E-7
score: 31.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..334
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 37..124
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 532..574
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 46..101
e-value: 6.4E-4
score: 29.0
IPR000313PWWP domainPFAMPF00855PWWPcoord: 50..102
e-value: 7.9E-6
score: 26.2
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 48..94
score: 11.072
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 538..572
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 538..572
score: 11.136

Blast
[Close]
BLAST of TCONS_00049707-protein vs. Swiss-Prot (Human)
Match: ZMY11 (Zinc finger MYND domain-containing protein 11 OS=Homo sapiens GN=ZMYND11 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.689e-22
Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0 
Query:    6 TELARMVVLDGQNELSQIDICSECYIRSNDRMKNWFSIPCIPEHRIVYAKLGTDPPWPAKVLRENEDGSSIDVRFFGNPYQRAWIPNRKQNIWDLDEKPQ--PKKRSKALSLAEEELKVYLRLL 127
             ++ARM+  D  +EL ++ +C  C+  SN R  NWF  PCIP H +V+AK+     WPAKV+++ ++   +DVRFFG+ +QRAWIP+  +NI D+         KRS     A +EL+++ R L
Sbjct:  238 ADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDN--QVDVRFFGHHHQRAWIPS--ENIQDITVNIHRLHVKRSMGWKKACDELELHQRFL 357
The following BLAST results are available for this feature:
BLAST of TCONS_00049707-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMY111.689e-2240.32Zinc finger MYND domain-containing protein 11 OS=H... [more]
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