XLOC_031072 (gene) - C. hemisphaerica

Overview
NameXLOC_031072
Unique NameXLOC_031072
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_148:27804..32409-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031072 ID=XLOC_031072|Name=XLOC_031072|organism=Clytia hemisphaerica|type=gene|length=4606bp|location=Sequence derived from alignment at scaffold_148:27804..32409- (Clytia hemisphaerica)
AAAAAATCAGACATCTAACAAATATGTCAACAAGCCTTTATTATTCGAAC TTTCAATCACATATTGCCATCTTTCAAAAGGCTTTGAGATATTGGATGAT CGAGGCAATTTTTTCTGACAAACACACAACAAAGAAATCCCGTTACAAAA GTCATCTACAGATATGATTGAAGATCACTTAACAAAAAAACACAGACGTG TAAACACGACAGGAACAGGGTAACACTAAAACCCTTTCTTAAAAAACAGA GTCAATCTGTTCTTAAGCACTTTAATTCAAACATTTCAAAATAAAGAAGA AGAAAAGGAACCGATTTCAGGCAGCGAGGGCAAAGCATCGTGGTGTTATT CAGAGGGTGTGTTCAACTTGACAGCAATCGAAATATTACAATTTTACCGT GTGGGGAATTTGTAATAGTAACAGTTCAAAATTCAAATGTATAAAAATTG AGTGCAACATCTTTAATCAGAAAGCTTGGAATATAGTGCAGCAAGCACAA ATAACTGGTAAGTAGTACAACATTTTGCATTATTGATTCTACGTTTATTG ATGTGGGAAAAGTATTAGACAGATAAACATATCAATAATCAAATTTTTAA GGAATATCTACTCGTAAAATAATCATGAAAATCTTTTCAACATTCATAAA ACATTTTTTTCATGATACCCTGACGTCAAGTGTTTCACTTTTTAAATTAT AGAAAGCTTCATTGTTTAGGTTTTTCACGAAACTGATTTTCGAAAAGAAG CAGCAGCATCTTTTGATAAATAAGTAAAATATGAAGCTATTCATCTTGGA GTATGATTGAATTATTCAAACTGCATCAACTTAGTATATGAACAGCCTCT TGTGATTAATCAGTTTTTAAATGAATTATCCTGTTCTTTTTTCAACAGAT AAATTTTGACGAATCAAGAAGTGCAGTAGCATCGACAAAAATAATGGCTT TTATGAAACCAGACGAATTCAGCGCATTTCCACTTCCATACTTACCTAGA GGAGGAGCATTCCCATCACCAACTGCTCCACTACCAAGTATGAATACTTT CTCCAACAAACGAAGACATTCAGAAAACACAACATACGAAGCAACTTTAC CATTACCACCATTGAAAGTTCCAAAACTCATCTCTTCAACTAGCAGTCTT CCACCACCACCTCCCCTGGTCACACCAGGTCGAGGTCACTCTTGCACATC TGATGATTGCAAATACTGCTCAGGATTGACTAATCTGGATATTGCAGCTT TTTACTGGTCCATGATTGCTATGAGAGGATACTCCAAAGCGAAAGCATCC AGTTCATACGAAACGCCTTACTCACCAAACCTTCCATCTCCAGTCTGCAA GTCTTCAACATTCGATCTTGCATACAAACCACCAAGTCCTTCAGGTAGTT TGTCAAGCATGGATTCAGAACCTCTTTCACCATCAAGCAGTACTACAAGC GAATCATCAACTAGCTCCACTAAAGATTTGGGAATTAAATACCAATGTCA AGTCTGTCATAAATCTTATTCACACCCTCGACTTTTAAATCGTCACCTTC AATCACACACACCCTACAAAAAACACCACTGCCCTCGCTGCCGCAAAGGA TTTAATGATGCTTTTGATCTGAAAAGACACATTCGAACACACACTGGAAT CAAACCATTTCAATGTCGAATGTGTGAAAAATCATTCACTCAGGTAAGAT ACTTTGAGTTTCTTATTTAGAAAGTCCATAGTTAGTAGACAAAGTGCCAA CAGAGCATAAATACAACATTTTAAGATTAACAACTACACAACAGCATCTT TTTTTTTGTTTTTTCAGAGATGTTCATTGGAAGCTCACATGACAAGAGTA CACAATGTTGTCCACAAGTTCGCTTTCCGTGAACGCCGACCCAAGCTGTT TGTTTGTGAAGATTGTGGTGTCACCTTCCCTGATAACAACAAGTTTCGTC AACATGAAAAAGAAAGCACATGTAGACCAAACAAATCAAACTAAGAGTTT AGTATAACAGTTTTAGACAGTAAGATTGTTCGTTTTATGTTTGTAATGTC CCTATTTCTCCTGCTCTCATTTTATTTGTTTCAGATTCTCAATGTTGAGA AAGAGAGGAGAAACGTGTTGTCCCTGTATATAAATTTTATTCTAAATACT TCAACTTATATTATAACGTATATATTACGAAAATGTGGAACAAGAAAAGG GTTGGCGGCTGATTATCACTAATGACTTATATTAAGTCGTAAAATAGCCA GCCAACTAATTTGCCCTTTTGGGCAAACAATATTATTTTATAGGAAAGTC TTATTGTAAACAGTTCACTAACTTCTTGCTACCGTTACAAAACTGTTCTA NAAAATAATGGCTTTTATGAAACCAGACGAATTCAGCGCATTTCCACTTC CATACTTACCTAGAGGAGGAGCATTCCCATCACCAACTGCTCCACTACCA AGTATGAATACTTTCTCCAACAAACGAAGACATTCAGAAAACACAACATA CGAAGCAACTTTACCATTACCACCATTGAAAGTTCCAAAACTCATCTCTT CAACTAGCAGTCTTCCACCACCACCTCCCCTGGTCACACCAGGTCGAGGT CACTCTTGCACATCTGATGATTGCAAATACTGCTCAGGATTGACTAATCT GGATATTGCAGCTTTTTACTGGTCCATGATTGCTATGAGAGGATACTCCA AAGCGAAAGCATCCAGTTCATACGAAACGCCTTACTCACCAAACCTTCCA TCTCCAGTCTGCAAGTCTTCAACATTCGATCTTGCATACAAACCACCAAG TCCTTCAGGTAGTTTGTCAAGCATGGATTCAGAACCTCTTTCACCATCAA GCAGTACTACAAGCGAATCATCAACTAGCTCCACTAAAGATTTGGGAATT AAATACCAATGTCAAGTCTGTCATAAATCTTATTCACACCCTCGACTTTT AAATCGTCACCTTCAATCACACACACCCTACAAAAAACACCACTGCCCTC GCTGCCGCAAAGGATTTAATGATGCTTTTGATCTGAAAAGACACATTCGA ACACACACTGGAATCAAACCATTTCAATGTCGAATGTGTGAAAAATCATT CACCCAGGTAAGATACTTTGAGTTTCTTATTTAGAAAGCCCATAGTTAGT AGACAAAGTGCCAACAGAGCATAAATACAACATTTTAAGATTAACAACTA CACAACAGCATCTTCTTTTTGTTTTTTTCAGAGATGTTCATTGGAAGCTC ACATGACAAGAGTACACAATGTTGTCCACAAGTTCGCTTTCCGTGAACGC CGACCCAAGCTGTTTGTTTGTGAAGATTGTGGTGTCACCTTCCCTGATAA CAACAAGTTTCGTCAACATGAAAAAGAAAGCACATGCAGACCAAACAAAT CAAACTAAGAGTTTAGTATAACAGTTTTAGACAGTAAGATTGTTTGTTTT ATGTTTGTAATGTCCCTATTTCTCCTGCTCTCATTTTATTTGTTTCAGAT TCTCAATGTTGAGAAAGAGAGGAGAAACGTGTTGTCCCTGTATATAAATT TTATTCTAAATACTTCAACTTATATTATAACGTATATATTACGAAAATGT GGAACAAGAAAAGGGTTGGCGGCTGATTATCACTAATGACTTATATTAAG TCGTAAAATAGCCAGCCAACTAATTTGCCCTTTTGGGCAAACAATATTAT TTTATAGGAAAGTCTTATTGTAAACAGTTCACTAACTTTTTGCTACCGTT ACAAAACTGTTCTAGTTCTATTTCAAACTCAAGAAATCAACGTATACAGC AACAGTTGTAACGCTAGCAAAAAGTTAAGTTATCGTATAATCATTTGTTT TCAATTTTATCGTATTGATTGTAAGAGCGTGAGAGTTTAATGCGAGTGAG TGTTTAAAAGAGAGAAAGTGTGAGTTCGTGGACTTTAGTCAGTGAGTGTG AATTTATATTAAGTAAGTTAGAGCGATCTTGAGAGGTACGTTTAACAATA AGAGAAAGGGATGAGAGGTGATAAAAAAGTTGACTTACTGAGGCAAGGTC AAAAATTATGACAGATTCTTTCCTGCGGTTTCTTTATCCAAAAGCTTCTT TTGTTTGTCAAGTCGTCAACGACACTCCTTCCCTGTTCAAAAAAAATTAA AACAATAAGAAAAGACATGACTGAGAGAGGGAGAGTGAGTGAGTCATCAT TAAAAAGCTATAACGATATCATATTAATCTCTATTGACAAAGTATATTAA GTTTAAGGACGTCCATCTATCGTTCATGAGAGTTTTTCAATAAAACCACA TCTACTCTATCATCTTTTGTTCAAAATAGGTGGAGCATGAGAAAGTAGAA AGGAATTTCTTTTCTATTCACCCAATGCCGTTAGATGGCTCCGAAATGTT ATTAAACTTAATACCATCCTATTAAACATCTAAAAACTAACCATCAGATT ACAACTCTTACGATGGTTCTTTGCGTCGAATATGAATATCATGTAACAAA ATCAACCGAGAGAAAGTTTCTTATCTTTGATAAAGCCGATAACGGTTTCG CCTATTTCTTTTCAGAAGTCTTTTGGGCCAAGTAATCATATCACCTCAGG TTGGGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048891TCONS_00048891Clytia hemisphaericatranscript
TCONS_00048890TCONS_00048890Clytia hemisphaericatranscript
TCONS_00048889TCONS_00048889Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048891-proteinTCONS_00048891-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_148supercontigscaffold_148:27804..32409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.2 0.16 0.08 15.04 11.81 27.33 29.69 11.95 25.53 15.2 14.39 79.96 67.9 62.22 73.42 49.45 49.85 59.82 76.9 66.31 57.54 23.59 35.13 42.54 47.65 60.47 70.78 27.07 30.33