XLOC_031047 (gene) - C. hemisphaerica

Overview
NameXLOC_031047
Unique NameXLOC_031047
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_147:233582..239844-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031047 ID=XLOC_031047|Name=XLOC_031047|organism=Clytia hemisphaerica|type=gene|length=6263bp|location=Sequence derived from alignment at scaffold_147:233582..239844- (Clytia hemisphaerica)
CCAGGTTAAAACTGTTTTTTGAAATTCTGAAAAAATATTTCAAAACAATT TCGAGCCCCCGGAAAAAAACACAAATCTTTAAATGTTGACAACAGTTCGC TACATTTTCAGGAGGTGAGGTAGGAAAAAACTTCAAGTATATAAAGGCAG TCGAGAATTGAAGATTTTAATCTTGTTAGTTGAAAGAATTGTGGTAATGT TTCGGCTATTACTTCTAGTAGCTGTTGTACAGCTCGCCTGTGCCAGAGTT TTTATTGTTGATAATAAAAAGAAGGTCGCAGGTTTGAGACATGGATCTTT GACCAAACCATTTGAAACTATTGAAGCTTGTATCAAGAAATTGAAAAACC CAGGTGAGTGGAAATCATATGAGCCTGACTTTTATCTTACACCCCTGTCT TACAGCTCCATAGCCGGGTCTGTGACCGGGGCCCGGGGGGGGGAGATACT ACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCCGGGGCCCGGGGGGGGGGGGTACTACCCTTGCCGACCGACGGGGGTG CTCCGCTGAGGTTCCAAAAATGGACCCTACCTGAGACTCGTTTTTTCAAA ATTTTGCCAAAATTTGCGAAAAAAGTGACCCTGAATGGGACTGAAATTCC GAAGTTTTCTCAAATTTTCTCAAATTTTCCCCAAATTTTCCAAAAAAGGC ACCCTACAAGGGACTGATTTTTCTATTTTGTTGTTTTTGCGACCTTACCT GGGACTCGTGGAGGTTAAAAAAGGCACCCTGGCCAGTAACCCATTTAACC CTTCTAGAGGGTGTAACCTTTGATGGAAGACTAAAGGGAAAAATAACTAT ATATAGCTGAAATCAGGCTTTAAGGTACCTCTGTTCCAAAAATAATTTTC CAGCACTAAAAGGACAAAAAGTTCATTTTCTTCTTCTTAATTCTCTGATA TTTTTCAAGTTGACGATAAACCAGTTATCACACTTTTGCTCGTACAATAT AGGATATATTTTTCTCGAGTTTTCTAAATTATCCTCGCCTTAAGGCCCGG AAAATATGAATGACGAAAAATCTGAACTCGAAAAATATATCCTATATTGT ACTTTGTAGTACCGTGTGATAAATATTACTAATTTTGACTTCTCTTTCAT TTTTTTGTTGAAAAGGTGATGAATGCCAGATTCGCGAAGGAAGATATCAT GAGGAGATTAAAATCGAAAACTTGAAAGGAACGAAAGAGATGCCTTACGT TATTCGAGGTTATAAAGACGAACGACCACTTCTTGACGGTACAGTGGTGT TGAAAAATGTGACTAAATGGAAACAGAATGGAAATATCTGGAGGTAAGGT GCAGATTGCAAGCACTTAATATCAGGACAAGTTAAAAAAAAATTGCGTCT CTGAAATCGTGTGTTTACATTTAGAATTTTCCGACAATAATTTGATTTCA TTCTTTGTAAGGTAGGCAGAAGAGTGTCAATAGAATCTAAGTCAAATAAA ATGAAAATTTCTGGCCGGCTGATCGGCAAAGGTAAAAAATCGATCTCCAA TTATTTATAAAACACAATATTGATTTGACAATCATAAGTTAAAAGACCTC AACGTGTATCTTCTTCCGTTTGAAATTGAAATTACCTGAAGATTCTATTC CAATAGACTTTCGAGTATTACAAGTTTTTTATAAGAACATCTAAAAGTTT TGAGACCTTCGGATGTTCTTAGAAATATTTTGAGTTTTTAGCCTATAATT GTTCTTAACATGTTGTTATGAGTATTTTTTTATCCAATTGGGTGTTTTAG AGTCCACAAAGACTTAAAAATGTTCTCAACTGTTCTTAAAATCTTTGATA TCGAAGCCTTCATGTCATTATATAGTTTGTTCTTATAAAAAAACGTGGAT AATCTTCTTTAGCGCGAAGATCGATTCTACCATTTGGCAATTGTTCTTTG GTAAAACCATGATGACCAATGCAAGATGGCCGAATGCCAAATGGTCCGAC AAAACAATCTTTGATGGAAAACGGTGGCCAACACTAGCAGAAGGATCACG ATCAGGTAGGTACTCTGATCATTTAAGGGTTTTGACCTTCTAAGAGTGCT CTACACACGCCAGTTTTACTGGCCTATACTAGGATATTGAAAAAAATCAG TAGAGGAGTAATAGAGTAGTTCTGTAGTATATACTTTTATCGAATTAATC TTCGCGAGATTTATTTTTGAAGAAAACTCGCGAGATCGCTGACTCTCAAA ATTTTTAAAGATCAGATTTTATTTTGCTTAGTCGCAATATTAGCCCAACT TTTAAGGTTGAAACATTCATATGCCGATTTGAATCCACACTAACCGCAAT GATCCAAAAACACTCCTACAATCTCATCTTAGGGCTGATCATCAACAAAG GAAGAAGTCTTGCCGACACTGGTATCGATATGACCGGAGCTTTAGCCATC TTGAATATCGGGAGCTTCGAGACATTTGTGGCAAAAGTTGAAAACCACAG AGCCGGGAAAAATCAATTCAACTTTAAAGACACCTTCGGTGATTACCATT TTAGCCACGATAGAAGCCGGTACTTCTTGGAAGACAAGTTGGAGCTCTTA GATGCTGAAGAAGAATGGTTCTTTAACAAAACAGATAAAATGTTGTACAT GTATCCTCCACAAGGACAGAAACCATACGATGTTGAATTGAGAGGAAAAG TCCAATCTTACATCTTCACTTTCAGTAATTGTGAATTTATCACACTGAAA AACATGGATTTCTTCACTACCGCTGTTAAGGCCGTAACACCGACGCCACG GAGCCGGACAAGCGACTTGGTTTTTGATTCATTGAAATTTGAATTCCATA CTTATTCTAAACGTATGTTACAAGATATCAGTTTAATCAATTGGATGGAT ATTGATGGTATTTACAGAGTTGGCAGACCAGAAACATGGGGAAAATTCAC CTTCTACAATAATGTTTTCAGAGGATCTGATGGACTGGCGTTATCATACT GGGGACGAAATGTCACACTGTCTAATAACCTGTTTGAGTACAACGATTGG TGTGCTGCCAATATGGTCAAAGGAGGAGGCGGTTTAGCTACAGTAAAATC ATTCAGTATCTACGATGTGTTTGAACGTAACACATTCAGATACAATGGAG CAAGTGTTGCCATCAGACCTGGTAAATATCCAACAGTCAGATTAAATGAT ATCTCCAAACAGTGCTGGGGAGTTATCCAAAACGACGGAGCAGGTGTCCA GTTGACCAGAAAACCACAAAATTATTCAAGACTGGAATACAACTGGGTTC ATGATCAACCAAAATATGGTCTCCGTTTTGATGGTGAACCACCAAAGATT GGTGAAAATGGTACCATGTCCAGAAACGTTGTTTGGAAATGTAATGGTCT GATGGCGAAAGGTGATTACCATACGGTAACACAAAACACAGTGTTTGACA AGAGGAATGATAAAGATGATGACAAACAAGGTGCTGGTTGCATGCTCTGT GTGTTGAAGTATGTCCGCACAAACCCTGGTGTCATCAATGAGCATACCAT CGTTACTGGCAATATTGCTGATGTTGCCAATGGCGGAAAAATACCTAAAG GTAAAGGGAAAGTATATCCATTGCAGGGTTTGATCATTGAAGGCAACCGA ATGAACATGGATGTTAAACGAGAGTTGATGGATCCAGACAACCATGATTT CAGACCACGACCTGCATCGAAAACAGCACAAATCAATGCTGGAGCTTATG AATATTCCAGAGATTCGAAAACCTATTGGATTCCTGGACGACAGGTTGAA AAAGCGTCATCCCCTGTTCCAGTTGATGGCTCCCAGACGGTAATCACTGA AAATCGAGATGCATTGATGTGGTTGAATGCTTTAGATTGTTATCAACACA ATGTCTTCTTTGGTACCATCAAAGGAACAATGAGACTGATTGATAGCACC GAAAATGATGACAATGTGGCGTATCTTCCTTACAGATTGACCAAAGGACG TAGCTACCGATGGAGAGTGGATGCTGTTTGCAATGGATCAGAAGTTAAAG GAGATACATGGACATTTAAAGCTATTTAAATGCAGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTGGAAATGTAATGGTCTGATGGCGAAAGGTGATTACCATACGGTAACA CAAAACACAGTGTTTGACAAGAGGAATGATAAAGATGATGACAAACAAGG TGCTGGTTGCATGCTCTGTGTGTTGAAGTATGTCCGCACAAACCCTGGTG TCATCAATGAGCATACCATCGTTACTGGCAATATTGCTGATGTTGCCAAT GGCGGAAAAATACCTAAAGGTAAAGGGAAAGTATATCCATTGCAGGGTTT GATCATTGAAGGCAACCGAATGAACATGGATGTTAAACGAGAGTTGATGG ATCCAGACAACCATGATTTCAGACCACGACCTGCATCGAAAACAGCACAA ATCAATGCTGGAGCTTATGAATATTCCAGAGATTCGAAAACCTATTGGAT TCCTGGACGACAGGTTGAAAAAGCGTCATCCCCTGTTCCAGTTGATCGCT CCCAGACGGTAATCACTGAAAATCGAGATGCATTGATGTGGTTGAATGCT TTAGATTGTTATCAACACAATGTCTTCTTTGGTACCATCAAAGGAACAAT GAGACTGATTGATAGCACCGAAAATGATGACAATGTGGCGTATCTTCCTT ACAGATTGACCAAAGGACGTAGCTACCGATGGAGAGTAGATGCTGTTTGC AATGGATCAGAAGTTAAAGGAGATACATGGACATTTAAAGCTATTTAAAT GCAGATTAGATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048860TCONS_00048860Clytia hemisphaericatranscript
TCONS_00048859TCONS_00048859Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048859-proteinTCONS_00048859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:233582..239844 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.05 0.34 0.43 0 0.02 0.86 0.69 0.76 0.99 0.68 0.54 30.74 30.72 16.13 68.58 39.56 55.44 70.11 64.7 282.69 291.06 37.2 55.79 89.23 121.68 0.02 0 0.02 0.02