XLOC_030917 (gene) - C. hemisphaerica

Overview
NameXLOC_030917
Unique NameXLOC_030917
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_145:251781..261413+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030917 ID=XLOC_030917|Name=XLOC_030917|organism=Clytia hemisphaerica|type=gene|length=9633bp|location=Sequence derived from alignment at scaffold_145:251781..261413+ (Clytia hemisphaerica)
gggaatttgatgttctgtttacccacaagtgtttcaaccggtattgcaac gaagccatattttggtttgtacagaaattttgcaCCATGTGTcttgtttt ttatataaattagCTCTCAGCATATTTTTTGACGGCCCCGACAATTAGGC TAGTCAGGGCTTCCTTTCACTTTATTGATATTACGCACCACGCGGCAGTG CGTTGCTAAATATTatggttttgttttttcaatttcaagcaaaggttttC AAAATTATGCTTTCAATCAGTTAGTCCCACTAGCTTCCCGCCGAattgca tatcaaagattaatgctgcgctATAATATCTACTTGACTTGCAAGCAAAA AATGCAccacaaaacttctaaagggattcattgAAATCAACATTATCAAA AACTATGTGAAATTCCCTGAATTTTGAGCCATACTGTAGATGAGCTGAGC AAACcttgaaaacaaatttgaagaacaacttcccaagaaatGTGTGGAAG ACAGAACCCACCAAGATCTGCTCTCACAgctggataggctatttcccaga aattttgccAGACCCCAAACAaggacccatttacatgtgtggAATTAATT TCTACTTTAGTGTATAAGCTAGGCCTAACAAATTGAAGCACTGTATCAGG AATtcaatgacaaaatttggttggttggtttATATTTTACTAGAGACAAA AAATGAATTGGTAAAAAGTAAGTAAAAATGACATAGCTTATAGAAACTGC GCACAACATAGCAAGATGATACAGAATGAGTAAGTCAAGAGGTGATCGAG GTAACAAAACACCAAGTGTCAATCAAAATGCTCCACCTCCCAATCAAAAT GTAATTGTACCTGGACGTTTTACTGAAGGTGACTGGTAAGTATTATTTTG AATTCCAATAATTCAGATTCGGACTCAAGAATTTATTTGAAAAGCCTTAC AATAAAGATCAAGTTGAGGCAAGATTTCCAGCTTATTCAGAATTTTTTAT CATGTTTAactgaaattttcgattttttttacagtagtttagttttttct actttaaaaGCTGGCAATTTCAATGAATATTGctcatttttgtcaataaa attattATCAATCCTACTAGAATTGGTAATTGAATGCCTCCCCAGCTTAT TTACACTCGATTCAAATGTTATGTTTTCCCTTGGAACTTGATACAAACTA Ctgtcaaatattttatttaaatcactttaaaaaattaatcaaattaattt gatGTTTGTATATATTAGGTGTCTACCGccaaaatagcaaaatttgTACC GTAAgatggtctaatgtcaacatccctcatcttattctgacacccttctt tagaacTGGGAGTAATAGAAAAATTGGAATTGCTGATTGCTAATTAACga tcaaaaggaaaaaaatcttttttcaatcagtgatttcgaccttcctTTTA ATTCTATCTCTATTCTATGtcagaattagatgagggatgacAACGTTAGA CATCTTACGGTTTCCTATCACCTGAGAATTTCAATACACTGAATATAGCC CCTCTTTAGGTAGCTGAAAAAAACTAATAACTGACAAATTTGATCGTTTT AAGGATGGTATATTTCCAATTTCTTTTACAGGTTGGCTGCATGCTAAAAG TTTCTTCCTTAAAAGCTctttatttatgattttcaaTGTATATTACGTTG TTAAAAACTTTACCTAGTATTCATTGATAAGGGCCTATTTTGTTAGTAAC ATAGAGTAAATTTTACCAGTTGAAAAGATGGACTAATAATAGTGAACTAA TAATTTGACAATTTCTTGTGTTTTCTTTAGGAACGACCTACTCGAAAATG AGACATGTGAAGAATTTGTTTCGGATATAGTTAGCGATATAGCTGATGTT GCATGCGAtatcattttcaagaaaatcatcTCTGACCGCGTGGCACCTTA TGCTGTTTTTGCCGCAAAAGAGCTTTTACTAGAGTTTGTAGAGGTAGATC TCcgtttatttttcttaacaaATCTCACCAAAAATCACAGGTTCTTATTC TTATCTACCGTCATCTTATATATCAATTGTTATTTTGGTCAAACTTCAAA TTGTTGCTACAGATATCTTGTATAAACACaagtgaagcaaaataatgcgc catcttaGCTGAAAGTAGACCACAGAAACCTTAGTTTtgacactgcaatg acttcaaaatttcaaggatcGTGCAAGCtaaattgtgacgtcatttcATT CAAGATGGCGCATTACTTTTATAATAAGTAATAGGAATAAATAAGGAAAG AAAAGTGTGTATACAAGATATCTGTAGTTCCTACATATATAGAATCAACT TTTTGctaatattttaattttactttcagTGGGAATTTATTAAATGCGAT GTTGGTGAAAATGTTCTTCAAGAAGTAGCTTGGTGTGAAGATGATGGTAT AACTTttccactactggctaaaactggggtatttccgtagaaaacattat gtCATGAATATCCTGAATTCTGcgagtttttctttttactctAGCGGATT TCCCCAGCCcaaacgaaaaaaaatataattcattgtggtatgttaaaata tttcagttGCCAACGACTCCAATAGGTTGTTTACATTAattaacggattc gtgctcctaaAAGATATAAAATAATCCTGTCACTTAGAGCTGCGTTTCAT ACAGTACTAAATTAAGTAAAAAGTTCTATGATATCTTCTGGATCTCAATT TTGGAAAGAGATATATCAaacaaatatgaaaataatttttgtcctTAGTC AAAACATATTTCAaacaatcttttttgtttttcttagaGCCTGTAGCGTG CGTAACAGACAGCTGGGCTCAAGGAGCAGTACCCGTTGTTCATTCAATTA ATGTATTTCGAAAAGGAGGGAGTGAGACAGTGACTTTGGAGGAGAATAAA ACAACGCCAAGAATCGATGAAGAAGATTCAAAAGAGTTGAACGGTAACAA TAAGTATTATGGATTTGCTCATTTGTAAAAACTGAGTGCGATGATGGCAA CGAGCGCATGGGCATTTGTTTAGGCAAAAGTGATACGGTGGCGTAATGCC ATGTTTTACCTCCGGAATTCTCTCATAGGCACCTGGAAACTGGCGGTTAT ATAATAATCTACTTTGGGCATTATGCTTTCGTGAAAGAGGGCCCATAAGC TTACAGAGGCTTTTTGAAACAAGGCCCGCCTTATCTTCTTATGCAAAGTT TTACCACTGTTAAACCAAGACATGATTCTGTATTTCGATCGAGTCAAAAA ATAGGGTGGCGTGGGGACGTGGTGCTCCTGCTCTGGGTCCAGACCAATCG GTACAAGACCGGAAAAATCGGATGATCTCATCAAGTCTGCTCCGTGCTGA CAAATtcttcaatgtttttgttttcaaagctGTGTAACATCACCGGTATT CGTGGTTGTAAAGAAACGCTATTCTTTCATTTCATGTAGTTGTGATAAAA ACGACCGTAGGATAAAGGTTGAGCATCGGGGTACGACACGCTAGGAAAAC CTTCGATTCGGGTTCGATTCCCAGCCACTTGGTGGCTCTCTATTGATGCT CAGTCAAGGGAAAGTGGGGAAGTGACGCCCCTCTCTCACATTCGGGCAGA TATCTCAAGAAAAGGAAGCCTTCGGATAGTCCTTGACTGCGGTCACAAAC TTTTATAGACTTTGaaaacttttatcgaaaaaatctTATGATTTGTTTCT ATATCTAGTGTATTTTATTTATAGAAGAAGAAAAACGAGAGAAAAACGAA GAAGCTGACGAAAACAACAATGATCAAGAAAATGATGAAccaatcaaaaa taaagaagatcagaggttttttttttcttgaggtttcttttaagaagaca tattattttttgttactGTTACTTGTACCCGACTTCATCTTTTATAAAGC TAAAAATATCTTTCTCATATGCCCTCTTAAAATCGCGCTTTCTTAAAAAA GTTCTGTTCAACTAAACGTACGCTTGGCTCGatcgattaatatcgattgT TGGTTCTTCCTTacaattgttttgttttgatcattttccAGAACAGAAGA CAAAGAAGCGATAACGGATAGTGAATCAATGAAAATATCACCAGAACAGA CGTCATCCATTTCCACACAGCCAAATTCGACAATCAGAAACTCTTCAATG GAGTCTCCTTTGATGGAAAGTTTGCCAGGAAAAACATCTTCTTCGCCTGA AGTTCCATTATCTCCAGTACCTCCGAAGGTGaaggtttttggacctacct ccgggtgccccggtggaggtcctataaattaacccatgtccgttcgtttt ttccttacaacccttgcctctccccccatcaacaatcaatgataaaattt ttgcgttatgcattttcgctaaacacTATATTTtatgactgatttttttc atttttctcctcgcattgctatctaactttcatcatcaggtaggtccatt cagcatctagcttttTTTCTGTAATTCTGCTCTAATCCAAAAATGTAATT GACATGAGAAAAtaacagatatcttatatataACTATAAAGAGTTACCTC TATCTTCCCCAAGCCATGACAATTGAAGCAAAAAGATTCGTCATCTTTTC AAAGAGTGCATTATAGTTTGGTACCGGTATCCGAATTACAAATTTGGcta ttcatcaaaaaatttaaaaaattttcaggaaaatgaaagaaatgggTCCA AAATATTGCCAAACTCCGAAACTCAATTCCCGCGAAATGCGATTTTTCCG AATTCTTTTTCGACCATGAAAATTAGttttcgctaaaattagttctctTA AGGTAGTATAGCAGTAAACAGGGAGGGTGTGAGAGAAATGGATTGGACAG ACTGCACCGAACTGTTCTTCTTTCGAAAATAGATTTTGCACATAATTTTG TTTCAGCTAGGGCTGTAGAAACCTCATCCAGTGTCTTGAAAAGATTTATG TAGAAAAGATTGGTCAGGTGCATAACCGCCAAGCCCTAATATTCTATTAT CGAATTGAATGTCGTTGCAGTTAGACAAATGGAAAATAATAAAGAGTTTG ATAATTGGGTGGGAACAACTTTCAAATATGAtcataaattcaatttttta tatctATTTCATTAATAGAGTTCAAGAAATCTTCAAAGCCAGCATCGCAA TTCAAACACATATAAAAAACACAAAGGATCACTACCAACCTTTACTGCTA TTTCACTATCGCCCGTTACTGACGACCGCCCAAAACCTGGGGCGGGGGCG ATGAGTAAGGATCGTCATGGAGCGCCCATTCATTCGTCAGATTCACTTTT CAAACATCAACACGGTCGCCCACCGGGCGTCAAAGAAGTTATTTATAACG AAGCAGGGAATGTGGTGCATGTTCAGAAAATTAATATAGCCGCCCTGCCC GACCATAGGTAAGTAATTTTTTCAAGTCTTAATACAGTGGAGGAAAATTC GAACATCTATAACTCGagtgtctccttaactcgaagatGTTTTCTTTTAC TTCAGTAAACAATACCTtaaaaaccttactccataactcgaaatttccac aactcgaacaaatttgtgttccccatgcgtgttcgagttatagagactcc actgtatatgtaaattgaaattaagtcattttgtcttatcaAAAGCACTA TTAAAAGCCAGAAAAATATCACAAATTAAAAATTCGTATTTTAAAAAGAT AATGGTTGGAGGGAattaaattttatgaatttacGCCATAGTACAAGGGT GTAATCATAGTACATATTATGTACTACGATTACACCCTTGTCTCACAATc acggtggaactttttcccacagcagggataaaatttatatcgaaatccca acagggataaaaattctgttGTTCCAAGTTAAAAAATTCCGTTGGGGGAG TGTTAATTTTTACACTCATTTCTAATGGAGctaaaaaagtcaatttccca gttggGCTAAGATTGaagggtatttttccaccggggaaaaaatgttgtcc aaattttccagtgggtgaGGACCCCACCGGGTGTGTGACACATGGGTGTT GGACATATTGAAACCATAGTCATGCCTTATTACACGAAATAAGTGAACAt gtactttaatcggattaaatttcgcgaaactAAATTTCGTGAGActaaat tgggctattccagaaatagtctgtactcCCTATgttgttgaggaggtgtg acgaccagggtggtctggaaaataaaacatCCAGGGAGGTCTGGAATTTG AACGCagaaatccagggtggttagtaaaatgaggttgaaaatccaggagG GTCAGTAacacgaggtcgaaaatccagggtggtccaaaaagaatgagaga aaaaaatcaaagggggtcctgaaaaattgtaaaaaatccagggggtcacc ttttaaaaaaagacctcctcaacattAGGGGTACAaactttttctggaat agcccatttcgCGAAGCAAAATAATCGTGAATTTTTCTATATTCAACATC AATAAGTCaacgttttgaaaaatttcgcgtaaatttaatttcgtgaatgA GCCTGAAAATAActgaaaatggccatttttttGCTACAAATTAGAATTTT GACTGCTTCCTCCACCGAAAAAGAGATTCCAAAAATTTCACCTGGATTGT ATTTTGTGAGTCAGCAATCTCACGCATTTTCACGAGACTTAATTTTGCgt aaatggcaaaaattcgcgaaatcgcgaaatccaatctcgcaaaatttaat ccgatCAAAGTAATTAACACGAATTaagaaatttcgtgttaattaAAACT CCTTTAATTAAAACCAACCTTGGTGTACTtggtgttaatttcaaggccgt taattATGTGTCTACttttttttgtataataaaGTAATTCCTGtgcataa tttttctttctttctacaGGGTAAAAACAAAATGTTCGATTATTGACTCG ACTCAACAAAACATGAAGAAAACTTCTCGAAAGTTCAAAGGGATTGATTT ATCAAATAGTTATGACGACGCACAAAAAACTAACACTAAAAACAAAATCG ATCCATATTCATTGATCAATCAAGCTGGTGGTCAAGATGTGGATATTTTA CGGACCTTGCGGACACATAGTCCAGATGTGTTACGGACCTTGCGGACACC CTTACCTCCCTCACTGGTAAGACTATATAATTCTATGAAGCGCCCAAGTT ATAGTAGAGTTTCCATAACTCAAATGGCACGGGGGAACGATATCGTTTCA GTTAAGGTGACATTCGAATTgtagaattttcaaaacattcaataaaCAGT CTTGTTTATATTTATTTGTCTAATGAAAGTTAAAAGATGAATcctatacc ttaaaggaagtaattttcgccacattttggtctaaaattgaccataaata gcatcttctgcgtgaattatcttgagttaggtaatgaaatcggctatacc cgtttaaaagtcttctatatagttttcgagagctttcgaatggtattctt gataatgtctgaaaatgagtttgaaattttcaaaatatttcgcccttagg gttttgcctgggaaaaaaaagaaatgtcccaaaaaagggatgttccacca gtgggattctaggggattttttcctgaggcataaccatcctatagagaag gtctggagaaagttttagctggatcttatttttttcccgtaaattatgct aaacgaccccactagttgacgctctctaactCGAATGTTTTCGTCTGATT TTTCAATgtgtttgtttttgaatttcttgaTGATCCTTTTTTGAAACTGG GAAAGAAAAAACGGGAGGACAAAATGGTAGTAGGAATAAGTGCGGTTTTA TTTGCATTGATCTTACTAAGTTTCCTCTGTTATTCGATATTAAGCTAGTG ACAAAAAACATCGAAACGAAGTCTTTTTCCCAAAATTGATTCGACATAAC TTTAAAAGTGTAGAGGGTCGAAAGCCCTGGGGGGCTACCAAAAATTTAAG GAATCTTTGGGGGAACTTAAAACTCACGGGGAGgtctaatttttgcctgg gacctaaaccaaGGCTGACGCTATGTTCTTCAATGATACGAATTTACAAT TTCCAACCGTAATTTTACCATAGGTTGATACAGCGGATATTTCTGAAGGT GTGGTCATCAAAGAAGGCGTTCTCTCCAAGAGTGGTCCAAAGGTAATCCA TCCCGTAAAGTGTATTTGTAGTTTCCTGTATTcacgacgtaatgttttat acagaAACACCCAAAGTAACCCGTGTGTTTGCCACTAAAgatatttccgt agaaaattaaaatttcgagAGACGAACCAAGCTAGCCGGCTAAAAGAGAC TCTGCAAGGAGCCTCTCCTGGATAAAGCGCCAGCTTGGTTTTGCCTTTTT TCACGATCCGAATGTTAGTCGTTAGTCATGTTTAGAATGTTAGCGCGTTT AGAAAATTTGAACTGTTTTAGGTATTGTTGCAAACACCCGGTCTTTTTGG GtacttccgtataaaacattacatcatgaatatcaagaactACAACTATA ATAAGGAACAGAGAGTTAAACTCGAACTTTACAAAACGTAAACAATAAGA TGACAAAATATTGATGCAACAACGTTCAATAAACAATAATCAATTTTTAT ACTTATGCATTAGTTAAATATTTAgcaatccaaacttagcagctaagtAC TAACTTTGAGGTtgaaattctctggaaaaataaggaactccaggctaaga gccaagttaaggttccttataaaaaacgtgtattagagAGAGATTCGAAT ACTTTGATAGAaagttagctctagtttagacggccgactttctgccctgc ctattctaattgttagagtaggcagaaagggggcacaaagttggcagtta aaatctttgcttggaaaagattgaaagaagtcattgcattgacgtcaaaa gagggcaatgcattgactttagacagtcCACTTCATGCCCACTTTAATtc gcaattagaataggcaggacaaaaagtgggctgtctaaactaGAACTAAT TTACGAGGGTTCCCATTGACGGAAACTGAGAAtgagttcgaattatggaa aaaattcgAATGATAAAATTAGTGAAATTCTACtgtactcatttttattt ttgcatcTTTAGGTTCAACCACTGGCATACGTGGATGAACAGTCACTAAA ACCCATACAAAGTGGTCGTGGTCGAAAACTAGACGTTCATGATATTATTA ACAAAACGAAACCAACATTGAATTCTTATTCAAGGTCGAAACCACTCCCT GCGATTCTCATGTAATTCCCTGCGATTCTCATGTAAATATATAATGGAAT TGtatacaatttttatttttgaactttATTATTTTAACTGTGTGTAAGAT ACCATTGATGTTAGTTATGAAAAGTGATGTACACTCTTTTTAAGCACATC CAAAATTtggcggaatttaatttcgtggttgATAGAATTATTTGTTTACA ATAATTATAACCTATTTTGGCCCAAAAAGACCAACTTTTTTAAATCCAAT GAATATgcgtgtttcgcggaatttaatttcgcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048634TCONS_00048634Clytia hemisphaericatranscript
TCONS_00048635TCONS_00048635Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048634-proteinTCONS_00048634-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:251781..261413 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
90.16 86.8 134.83 144.84 225.56 168.99 113.98 124.24 76.07 88.4 59.51 65.14 12.32 12.38 12.72 15.94 28.97 27.41 21.11 20.16 21.45 24.64 34.48 31.38 229.29 162.18 39.08 44.24 17.12 19.87