XLOC_030861 (gene) - C. hemisphaerica

Overview
NameXLOC_030861
Unique NameXLOC_030861
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:84471..89236-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030861 ID=XLOC_030861|Name=XLOC_030861|organism=Clytia hemisphaerica|type=gene|length=4766bp|location=Sequence derived from alignment at scaffold_143:84471..89236- (Clytia hemisphaerica)
TCTTAGCAAAATAAAAAATGTCATCACTTTCAAGAACCACAAATTCAGAT TCAAGAATCTATGTTGGTAATTTACCACAATTTGTGCGACAAAGAGACTT GGAGGATCATTTTGATCGATATGGTAAGGTGAGGGGTATTGATATACACA GCAGATTTGATCCCGCTTTCGCCTTCATTGAATTTGAAGATTCTCGGTAA GTATATTGCTCTCTCAAGGCTTACAAGAAATACTTGCATTATTTCATTTA CCTCAATGTGCATTTTTTCCATGAGCTTTCGCTTTGGTTTGTGCAATCTG TTTTTTAAACTACTTTCATGCAATACATTGGGCTAATTATTACATGGATA TACTGGGATATAGGCTTACATAGCATCAAGCTGCCTGTCATTAAAGAAGA TTAATTGTGACATAAAGAAGCTCTATTTGCATAGAAAATCTAGGGGATTA AATAATATTGGCTGGGTAGTTCAACTCAATGAGGACACTATACTTTGTTG AAGATGTTACCCTTTTCGAAGGAATATAACAACCTTATTGCAAAGCTCAA AAACTGATCATCTTTTATTTCAAAATTGAGATGCTCTTTTTCTTAGAAAA CATTTGGAATTTATCCTTTTTTGCTAAATTTATTTATTCTGAATATTTTT TATTCAGGGATGCTGATGATGCAGTATATGGAGAAGATGGCAAAAGGTTT GACGGAAACAGAATAAAAGTTCAATTTCCAAGAGGAACTCCAAGAGATTC ATCTGGCAGAGGAAGAGGTAGTTCCCGTGGAGGTCGAGGTCCACCTGGAG GAAGCCGTGGAGGTCGGGGTGGTAGAGGTCCACCCTCTAGAACTGATCAT CGTATCATTGTATCTGGATTACCAAAATCAGGCAGTTGGCAAGATTTAAA AGATCACATGCGAGAAGCTGGTGAAGTTGTTTATGCTGATGTTTATAAGG ATGGCACTGCGGTCTGTGAATTCAAAAGTTCTAGTGATATGAAATGGGCT CTCAAGAATTTAGACGACACAAAATTTAAATCACATGAGGTATTTACACA TTGATTGTATCAGCTCATTTTCTTTTAGGTTCTTACATTAGTTTCCATTC CATTCTCATAAAAGAAGTATTTACTACCTAGGCTTTAAATTCCTCCTCAT TTAATTTACTTACCTTTTANCTAGGGGCTAAAAAATCTGAAAATTTTCTG ACCCTCGGCCCCAACCATGGTGGGGCCTACAGGTGTCACTGTATACCAAA TTACTTTAGGTGTACAAACTTTCGCGAGCAGAAACTTTCGCAATTTTCGC GAATTTTGGCCCTTTTCGCGAAAGTAAATGTATTCAAAAATTCTAGGAAG GACCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGACAAAATAGATA ATTTGTAAATCTTCAAACTTTGACTATAAGACTAATAAGTCAAAGGACAA ATGTTTTAAGCCAATCCAAGAAGTATTTGTCCCTCTAAGCCATTTTTGCA TGTGAAAATTCTCTATTCTACGTCTTGATTCGCGAAAGTTTATGCTCGCG AAATATATTTTCATTCAATTCGCGAAAGTAAATGTCGTGAATTTCGCGAT TTTTCGTCCTCGCGAAAGTTTCTGCTCGCGAAAGTCGAATCTTATGCAGA ACGACAGTACAACATAAAGCAAAAAGTGGAAACTGATGGCTCACGTATTC AAAATTGAATGTCTTTTGTGTTGTGATGCTTTTAAAGTGTGCTGATTATC TCATTGTTCAAATTGTTATCTTAGCAAAATAAAAAATGTCGTCACTTTCA AGAACCACAAATTCAGATTCAAGAATCTATGTTGGTAATTTACCACAATT TGTGCGTCAAAGAGACTTGGAGGACCATTTTGATCGATATGGTAAGGTGA GGGGTATTGATATACACAGCAGATTTGATCCCGCTTTCGCCTTCATTGAA TTTGAAGATTCTCGGTAAGTATATTGCTCTCTCAAGGCTTACAAGAAATA CTTGCATTATTTCATTTACCTCAATGTGCATTTTTTCCATGAGCTTTCGC TTTGGTTTTTGCAATCTGTTTTTTAAACTACTTTCATGCAATACATTGGG CTAATTATTACATGGATATACTGGGATATAGGCTTACATAGCATCAAGCT GCCTGTCATTAAAGAAGATTAATTGTGACATAAAGAAGCTCTATTTGCAT AGAAAATCTAGGGGATTAAATAATATTGGCTGGGTAGTTCAACTCAATGA GGACACTATACTTTGTTGAAGATGTTACCCTTTTCGAAGGAATATAACAA CCTTATTGCAAAGCTCAAAAACTGATCATCTTTTATTTCAAAATTGAGAT GCTCTTTTTCTTAGAAAACATTTGGAATTTATCCTTTTTTGCTAAATTTA TTTATTCTGAATATTTTTTATTCAGGGATGCTGATGATGCAGTATATGGA GAAGATGGCAAAAGGTTTGACGGAAACAGAATAAAAGTTCAATTTCCAAG AGGAACTCCAAGAGATTCATCTGGCAGAGGAAGAGGTAGTTCCCGTGGAG GTCGAGGTCCACCTGGAGGAAGCCGTGGAGGTCGGGGTGGTAGAGGTCCA CCCTCTAGAACTGATCATCGTATCATTGTATCTGGATTACCAAAATCAGG CAGTTGGCAAGATTTAAAAGATCACATGCGAGAAGCTGGTGAAGTTGTTT ATGCTGATGTTTATAAGGATGGCACTGCGGTCTGTGAATTCAAAAGTTCT AGCGATATGAAATGGGCTCTCAAGAACTTAGACGACACAAAATTTAAATC ACATGAGGTATTTACACATTGATTGTATCAGCTCATTTTCTTTTTGGTTC TTACATTAGTTTCCATTCCATTCTCATAAAAGAAGTATTTACTACCTAGG CTTTAAATTCCTCCTCATTTAATTTACTTACCTTTTATAAACACTTTAGA AAATCCATTATAGTAAATTCATGTTTATCAAACCAAACCATGTGAAGATG ATGAACAATATAAATTAGGCTGACATATTCTGTAATAGATGATACAATCA AGCTAGACTATTATTATTTTCCAAATTAAAACAGAAAACTTTTTTATTTT GTTACTAGCTGGGAACCTCTCTCAGTTACACAACCACATCCATCTCATTG ATGTTGGGATAATAAAACATAAACCAGACAGGATACAAAGGAGAAAATTT CCACAGGATCATTCCCTAAGACCTACAAGGAGCAAGCCAAATAAACAAAC CACAACCCAGATGGTCATAAAAGGAAAACCCCTTGTCCCTCCATGAGCAA ATCTGTAAAAGGCACACACCATGTGAAAAGCCAGAAAAAAGGAAAACCTT AATGCTAGATGTGAGGTCAACTATCAATCCAAGGAAATCCCAGAAGGCAA AAAAGAAAACCCTTAATCAAAAAGGAGCAAATACTTCCAAAAACCGAAAG GATTTAGCTGTAAATAAGGAAGACCTATTCCAAAAACATCAGGAGTTGGA TACTGTACATAAATAAATAGGATTAGTTTAAGATAAATCCACAGGAGGAT AAAGCCATATTTCATTTCTTGGTAAAACTGTTTTATATATTTTTAACATT GATTTTTTAAATTTAGAAAATATGATCTTCTTAAGTCTTAAGATTCTATA TTGATTAAACTCAAATTAAAATCTTCTTTTTTTTAAAACACATAGTTGCT ATACTACCTTTTTTTAAATCAATGATTTTGAAATTAAAATTCTGTAGTTA ATTTACTATGAAGAATTTGTAGCCTTTAGGAACTTTTAGCAATTTAACGT TGTTTATTTCATTTTCAGAACGAAACTTCATACATTCGCATAAAACAAGA CAAATCACGATCTTCAAAATCTCGAACTAGAAGCAGATCTCCAAGAAGGT AAAAATAATTTAGTAATATAGTGTTTTCAAAGTTTTCAAAGTTGTTTTCT TCTCATAGACAGCCAAAAAAGGCAAATTCATTTATCGAAAGTCTCACGCT CAGTCAGCTAATAATAAAATGTCTACATCATTGAAGCTTACAATATAAAT TTGAAAATATTCCTTTTTCTATAAATAGGTTGGGAAATAATTAGTTTATC TAGCAAGGTCAGTGAAAACTTGTTGGTGTTGACACAATGTCGGTGTTAAA GTATTAATTAAAAAAGTAAGTAACTTTAAAAAGTTAATCTCTTTTGAAAA TGTAATAAAGATGATTATTCTTTTTAGAAGCCGCTCACCAAGGAGAAGAT CTAGATCACGCTCAAGATCAAAGTCACCGAAGAAAAGTAGCAGAAGCCCA AGCCGTAGCAAAAGCCGTAGCAAGAGCAGAAGTAGAAGTCGATCACCACA AAAAAGCAAAAGCAGAAGTCTTAGTGTAAGCCGTAGCCGTAGCAGGAGTC GCAGTCGCAGCAGAAGTAAAAGCCAATGAGAATTGTCTTGTGAGGCACTA ACGATTTTAAAACATGCAAATAGCTGTCTATCATATGTTTAAAAAAAGCG AAACTTCATATTTCTAGGATTTTTTTATCAGGAAACTTTTTTTAAACCAA ATTGTAAAGCACTTACATGAACTTTTTTTTTGCATTTACTTGTAACAAAA ATTTACTGCTTTTTATTTAAGTTTTCATTTTTATCATTGTAATATTTTGC TTTTTACTGTGGTAATTTTTTTTATATTATGCTACTATAGCTAGTAGTTT TTAAGATTACTTTGTGACTAGATGGAATTAGACTTTGGCATATGTATAAA AATTTGAAATACAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048539TCONS_00048539Clytia hemisphaericatranscript
TCONS_00048538TCONS_00048538Clytia hemisphaericatranscript
TCONS_00048537TCONS_00048537Clytia hemisphaericatranscript
TCONS_00048536TCONS_00048536Clytia hemisphaericatranscript
TCONS_00048535TCONS_00048535Clytia hemisphaericatranscript
TCONS_00048534TCONS_00048534Clytia hemisphaericatranscript
TCONS_00048533TCONS_00048533Clytia hemisphaericatranscript
TCONS_00048532TCONS_00048532Clytia hemisphaericatranscript
TCONS_00048531TCONS_00048531Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048539-proteinTCONS_00048539-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:84471..89236 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SRSF9serine/arginine-rich splicing factor 9 Homo Sapiens
SRSF1serine/arginine-rich splicing factor 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.9 39.1 80.03 88.66 197.38 164.18 250.35 253.23 203.54 219.09 176.3 177.94 137.62 157.6 85.58 151.33 93.47 117.36 22.61 28.79 59.29 66.12 50.23 44.4 76.52 78.67 47.9 44.38 34.56 42.77