XLOC_030761 (gene) - C. hemisphaerica

Overview
NameXLOC_030761
Unique NameXLOC_030761
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:62935..72942-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030761 ID=XLOC_030761|Name=XLOC_030761|organism=Clytia hemisphaerica|type=gene|length=10008bp|location=Sequence derived from alignment at scaffold_142:62935..72942- (Clytia hemisphaerica)
TTTTAAGGATAGTAACAGAAAGTAAAATAATATAAAAACAAATGATGACA
TCGATTGCGGTGAGAAAGCAGTTCAAGTTTCCAGTCTATTTCACAACCGA
TGTATTTCACAAAGTTTTACCATTCCACATGGCTAAAGGTACTGTGGATA
TATAATTGTTTGTATGATATTTACATTGAGGAGTTTTTGCATCATTACAT
TCTCCTTCTCAAAGCCGACGGCATAGATATTTAGATATATAGATAGTTGT
TACATTAACCGATGTTAATCATGAAAGAAAGCTATGTAAGTAAAGACAAA
GGAAGCTATACACCTTTTCGACCGTAGCCGCGCCAATTGCCGTGCGGGCA
ATTTTTATCTGTTTCACCACCCTAAAACCGCCCCAGTCTTTTTTCCGCAC
CTAAAGACAATAGAAAAAGTGTAAAAAGGGTTGGATCGAGTTTAGGGTGG
TGAATTAAATAATAAAGTAGCACGCGCCTGACCAGGCGGCTACGGTTGAA
AAAGTGTATTGGGGCATAACGTGGAGCACATTCACTTTCACTGGGGAGTA
GGCTACCTTTAGTTATTATTTATAATTTACTTTTTTCTTGGTTGCCAGGG
ATGCAAGTGATGAGGGGAATGGTGAACAATTGTGATTGCGTCATCGAAGT
TCGTGATGCTCGTGTAAGTAAATTACTGTAGCGAGTTTATGTATCTGTGT
TATCCCATTTGTCTATATCCTGATTAACTGAGGATGACGGTAAATCAGCA
CTTTTACCGTCCTCCATTTTTTGGGTCAAAACTGCGGGTTATTCCAAATC
GCTACAGATACGTCTTCAAAATCCGTCTTCAAAAATGCAAATATAAAAAC
CCGCCGCTTGTGTTTTACCAACACAGTATATTAAGATCATCATATGGTGC
TAATTTAGCATTAGAATTAAATGCGTTAATATATTATTAATATGTTCGTT
GTTAAGTCGCTGAAAGTGCTCCGTTTGGTGTAAAAGTATTTGAGATTTCG
AAGAGTTCTCCGGCGAAGCCTATTTTCCGAACACCATTTTAGTAGCAGTC
TGTTTTAGCGAGGAAAATTTAGCTTCCTTGTATTGCCCCTAGAAGGATCT
CAGATTCCTCATCTGCAAGCAGGTAAAAAAGCGTAGAGGGTGTTTGAAAA
TACTCAACAGCCTGTAGTAATGTCAAAATCTTAATCTTCGAAAAACACCA
GCAAATTCAAACGATTTCTATTTCTACATTCCCATTCATCAGTTTATAGG
ATTATACATGCATTTTTTCTTTCGTGTTTAGGTTCCATTATCCAGCTGCA
ACAAACAGTTCGAATATCTTTATGCGCACAAACCTCGAATTCTACTCATT
AATAAAATCGATCTGGCTAATGAAAGTCTCACAAAGGTTAATAAATATCA
TTTTAGAATGTCTGACAAGGGTTTTCGTCGTCGGTGCATGGGATTTTTAG
GATCGCCTGTCAAGTGTGAAAGTTATTGGGGGTGATTGAAGAATTTTCCC
TACGTAGGACCCGAGTATCAGGGGCCCAGAGGGAAACCTACAACATGGAG
CTAAGTGTAATCAAAAATGACTTTAAAACTTTAAATTTGAGCTGGGATGA
GGCTATGAATCTTGCTAGAGAGAAGAAAGAATGGAAACCATCATCAATCG
CCTATAACTGGCCTCTACCCTCTCCCCTACCTCCCTCTCCNTCAAAAGTA
CAAAGACTTTGCTCAAAAAAGATTTCTAAAACTTAAAAATCAAGTTTTTA
ACTAATAGTTATGTTCTTAACAATTTTAACGATAAATTAACTTGAAAACC
GGTTTGACAACTTTTATAAGATTTTAGTTTAAAATGATAGACAAAAGATT
TAATTGATGATTAATATTTAATTGATGATTACGGAGCCACTGAACTGTAG
CATTGCTTAAAACTTCGATTTTCCTTTATGTTTTGAGGCTTGTTTTGAAA
AGTTATACTTTTGGAAAGCCTGAAAAATGCTCCATCTCACTGTGGAAGAA
TTTTCAAAATTGANGACCCGAGTATCAGGGGCCCAGAGGGAAACCTACAA
CATGGAGCTAAGTGTAATCAAAAATGACTTTAAAACTTTAAATTTGAGCT
GGGATGAGGCTATGAATCTTGCTAGAGAGAAGAAAGAATGGAAACCATCA
TCAATCGCCTATAACTGGCCTCTACCCTCTCCCCTACCTCCCTCTCCCCT
CTTCTGTCCCACTGTCCCACAGTTACAAACGAAATGATCACAGTATTCCT
TTCTCTATGTCATCAGTAGGATTTTATTTTTTGAACCTACTGGAGGTCCT
ATAAATTAACCTGTTTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTGA
ATCAGAATTTTTTGATTTTTGGTACAAAGGTGCAAAATAGTGGTGGCCAA
AATGCGACGGAGCCCGATTTTCGGAAAAAAAACTTTTAGTAAATTTCAGC
CAAAAAATGGCTAAAAATAGGGTTTTTGGACTTGTTTTGTTTTATTTTTT
TTCCTCAAGTACATGATTTTGCGAAATAATACCGGTGTAGCGGATTATTT
TAACTCCCCGCAAATGTTGACCCCCCCAGTTAATATAAACTAGGAAATAA
TGACTCCCCTAGAGTAGAAATTTCCTAGGAAATATTGACTCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCC
TGTTTTTCAGATTTTAAACCTCTTGAGAATTGCTTTAAGATGCTAAATTT
TGCTAATTCGTTACTTTTCTCGTTCAAGGCTATGAAATAAGAATTTTTCG
CAGAGCTGATTTTCGTCGTTGACACCCACCTTTTGCCGAAATTCTTTCAT
TTTTCAAGGGACTTTAAGAATTTTCAAAATGTATGGTATTCCGCTGAACA
GATTTTTCACGTAATTGTCGGTAGACACGAAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGAAGGAAATGCTTCCCTCAGATGGAGTAT
TTCTCTTACGGGGGTCTGTAGAGTTAGCCCTGGATAGCCAAATGAATTTT
TAAATAATTTTGTCATAGATGATAGAGGGGAGTCATTTTAAACCAAAGGG
GGTCAAGATTTCCTAGGAAATAGCAACTCTAGGGAGTCTTCATTTACTAG
TTTATTATGACCGGGGAGTCATTATTTAGGGGAGTTAATTTTTTTTGTCA
CACCGGTAATGTAATCGTTTTTTACGTTACGGGAAAACCAAATGAAATGA
ATTGGATGGACCTCATACTGTACTTTCATTTGTTTTCTAACGTTAGTGGT
CGGGGGGGGGGCACCTTAAGGTAAGTGACTCACCGCAGGTGCGCCTTCTA
GGGTACGGTATCAGGCTTCAAGTGCGTCAGGAGGTCAAAACCAAAATCCA
CAGAATCGAGTTCGACACTAATAAACTGTAACTTTTCTTTTACTGATGTT
TCTTTTCAGGAAGTTTGTGAGCAAAATTTGTCTCAAGAAAACATAGTCCA
AACGTTTTACACCAATTGCAAAACGAAAGAAAAAGAAATCTTCACAGAGG
TTTTTAAGTTGTCATTTTATGATTCCAGTCCATGAAAAATCGAAATGTAA
TAACCGCATTCTTTTTCGCCGTTCAACATATGAGTTCAGTCCATTTAATA
AGTGGGTCTTTCTCTATTTGTCTTCTCTACATCATGACATTGTTGATCGC
AGCACAATTGGTTGCACAGTCTACTGTGGTGCCAATGTAACATTTTATTT
GTAAAAATCTCAGCCCACCAGTGAACCACATTAAAGCTTATGATTCTTTG
TCAATTATGTCAACGATTAATTCATTTAGGTGATGAGATCTTTGAAACAA
ATTCTTCGCCAAAAGAATGAACAAAAATCTATAGCCGTAAGTTCGTTACG
TAAATTTTTTACGCAACAGCTTCGATATTCCGGTCACAAAATAATATTGA
AAATGAATTATTCCTTTTTGGTTATTTATGACTTTTTCCGTAACCTTTAG
ATACAGTAGAGTGTAACACAAAGATCTACGGAAAACACAAACTTGCTTGC
TTTATTGATAGTTCAAGTTATGGAAGCAAATGGTTCGTTAACTGGTGATC
GAGTAATCGAATTTCTGAAATATTTTCATTTTAACTTCATTTTTCAGGGT
GGAAAGCCAATGAAGGCGTTGGATGACAGTTCTTTTAAAGCACTTGTATG
CGGTNTCAGGGTGGGAAGCAAATGAAGTCTTTGGATGACAGCTCTTTTAA
AGCACTTGTATGCGGAGTTCCAAATGTTGGCAAATCTTCGTTTATTAATG
CCGCAAGACAACGTTACTTGAGAAAAGGTAAATTGAGAACAAACTTTACA
CGTTTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATG
CCTAAAAACTAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTA
TGTCAAAAAGTTTGGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCG
ATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAA
ACAATGTGTAATCCAAGGCAATTTCAATTTGTGCTACCTACATTCTGAAA
GGAATTCATGTAATGAATACTAATCTCTGTTGCTTTTTGAATTTCAAGGC
TTACAGTTTTTGACAAATCTCTCCTTCCATAAACTTTTCATAGGTGGTAA
AGCAACACCAGTTGGGCGGAAACCAGGCGTTACCAGATCTGTACTGACAA
AAATTGTGGTAAGTATTTCATCTTACGATATGTCTTTATGGTTTCTGTTT
TTGCTAGATAAATATTTTTTTATTCCAGGCATCAAGGACTTAAAAAGTTT
CATAAATCATTCTGGATACGGCAATTTTTAGTCCAATTTTCTTTTTCAGA
TATCGCGAAACCCAAAGATTTCCATCCTTGACACACCAGGTATTAAACTC
ATTCAATGAATGAATATCATTCCTTCAGATTCATTGAACGATGTTCAATA
TGGCACCACAATTCATTTAGCAATTAAATCGACGCCTTTACCAGGGTTGA
GAATCGCAATACTAATACGCTGCAGAGATTCTCGGACTGTTTATAAAAAT
ACTTATACATTGAGTATTGAAAAGTTATCTAAATTTACAAACTTCATCAT
TTTTATAATTTTTTTCAAGGTATCATTTCGCCATACTTAAAAGACCCGAT
GACTGGAATCAAATTGGCTTTAACGGGTATTTGAATTATTTGTGAAAGAA
ACTGTGGACAATATTCTTTTTATGTATTAGATGGTGTCTATTTCTCCATT
CGACAATAAGGCACTGAATATATTGTACAAATGACTTTAAATTTTACAAC
ACAGTGCTCAATACCGAGATTGACAGAGCGGACACTGGATATATATGACT
ACCTAATAATCTTACGAGGATTGTTTTTAATTCTCCTCGACTTTTTTAGG
AACTTTTCCTGATCACGTAATAGGAGAAGAANCTTACGAGGATTGTTTTT
AATTCTCCTCGACTTTTTTAGGAACTTTTTCTGATCACGTAATAGGAGAA
GAAGTAATAGCCGACTACCTACTTTATGCGATGAATCAGCAAAAAGTTGA
AACGTAAGTTAAATATTTTTAGTGTCAAACCAACGAAATGATGTAGACGA
AGCTTACAATTACATTCGTACAATCAAAATGCTCTACCATCTGAATATCT
GAAAAGTTCCGAGGCCCCTAATAACCCTTTTTGTCCAGGATACTTGTAGA
ATTTTCGTGTGGTCATTTTGACGGCTTTATCTTGCAAATCGCTTCCCATG
CAATTTTAGCTTTCATTTGTTTCATTTTTTTTTTCATGATGCATGTGTTG
TAAGGGCACCGTAGGTACCGTAACTTCGTGTAATGCCGACATAGCAACTA
TCTGGTCTTTAAATGTTAATGAATAAAACCTTCTGAATAAGCTGTTTGAA
AACAATCACTCTAACTACTCGTAACTACTTAACAGACCAGATAGTTGTTA
TGATAGAAGTTACGTTGGCCAGTATAATGTGCCTTTCTGTTTTGATGATC
TGATATATTTATCTATCTTTTTTCAGATACCTTGAATTATGTGGCCTCGA
TAGCCCGACGGACGATTTCGAAAACTTGATGCAATCAATTGCTGAAAAAT
ATGACTTTTTGAGAGGTTAGGTTAAACCCCCCAAACTTTTACAAAATTGA
ACATTCGCCAAATTAAATCCCCGCTAAAAATCGATTTAAATACAACAAAA
TTAATCAATCAGGTAGAATGGTTCTTGTTTACACGCTAGTCTTGTTTTCG
AAGCAAAAGAAGTTGATTCGTAAATCTTGAATTAATTTTGGTAGTGATAA
AAATATGGCGACTTTGGTGTATTTGAAAAAATTATGAACTCAAAATTTAA
CAAATCGCCCAAAATTAGCCACTAGGTAGAATGGCTTTCATTCGGGGGCT
TTCGGAAACTTTTGATGGTAATTTTTTAGTTTGGTTCCTCTCCTTTTAGG
TTCAGAGCCAGACTATCGAAAGTGTTCAATTAAATTGATCAATGCTTATC
GACGAGGTCACCTCGGACCTCTTACTCTGGATTCGGTCACGTAAAAAAAG
GTTTCTCCCTCGACAGGTAGCTTAATTTAATATTATTAACAAATATATAA
TAAGAGTACTTGTATTAGGCCACACGTCATCTTCAAAGGCTCTAGAAATC
AAAACGTCCGAGTACCTTTTATAATCACAAAGCGTTGTTCGGATTTTAAT
CTGAGATACTGCATTAATAATTCCATAAGTGTAATTATTTATTTGTTCAT
GAAAACGGAATCGTAAAAGCATAAATCTTTATAGGAATATGGAAAAATAA
CAGGTGCAACCATACTCCAGATGTACAAAAACACACAAAACATGCCACTA
CATAATTTAATCCACACAGCGCCCCATCCCGCCATAAGTTTAACAGTAAA
GTTCTCCTCTTCTTCAGGGCGATACCAATTGGTGATTGACATCATAATGT
AAAGAGAGCCTAACGCTAGTGTAAACGCGAAGAAAGAATAATTGTATTCC
ACACCTTTCTCTTCATCGTTGTAAGTCATTTCAAATCGATTCTCAATTCT
TTCCGTTCCCGAACTCGTCACCACTGGCCCGGTCTTTTTTCGCACTTTTC
CGTATTGCGGTTGTTCAACTATACGGGTACTAAAAATGGTTAAAATGAAA
AACGTGATGCATATTGTTGATATGATTTGTAAGTTTTGGATGGGATCAGC
CGGGTAAAGGAAATCTTTTGTCGGGTTACAAACTTCATCTGGTTCGTTCG
TTAACGTCATCCATAACGTGTATGAGGAGTACGCACAAACGACAGATGAT
TGGAGCATCCCGGATTTGGGCCGGGCAGCCTGTATTACGNTCCTTTTAGG
TTCAGAGCCAGACTATCGAAAGTGTTCAATTAAATTGATCAATGCTTATC
GACGAGGTCACCTCGGACCTCTTACTCTGGATTCGGTCACGTAAAAAAAG
GTTTCTCCCTCGGCAGGTAGCTTAATTTAATATTATTAACAAATGTAAGA
GTAATTGTATTAGGCCACGTCATCTTCAAAGGCTCTAGAAATCAAAACGT
CCGAGTACCTTTTATAATCACAAAGCGTTATTCGGATTTTAATCTGAGAT
ACTGCATTAATAATTCCATAAGTGTAATTATTTATTTGGTCATGAAAACG
GAATCGTAAAAGCATAAATCTTTATAGGAATATGGAAAAATAACAGGTGC
AACCATACTCCAGATGTACAAAAACACACAAAACATGCCACTACATAATT
TAATCCACACAGCGCCCCATCCCGCCATAAGTTTAACAGTAAAGTTCTCC
TCTTCTTCAGGGCGATACCAATTGGTGATTGACATCATAATGTAAAGAGA
GCCTAACGCTAGTGTAAACGCGAAGAAAGAATAATTGTATTCCACACCTT
TCTCTTCATCGTTGTAAGTCATTTCAAATCGATTCTCAATTCTTTCCGTT
CCCGAACTCGTCACCACTGGCCCGGTCTTTTTTCGCACTTTCCCGTATTG
CGGTTGTTCAATTATACGGGTACTAAAAATGGTTAAAATGAAAAACGTGA
TGCATATTGTTGATATGATTTGTAAGTTTTGGATGGGATCAGCCGGGTAA
AGGAAATCTTTTGTCGGGTTACAAACTTCATCTGGTTCGTTCGTTAACGT
CATCCATAACGTGTATGAGGAGTACGCACAAACGACAGATGATTGGAGCA
TCCCGGATTTGGGCCGGGCAGCCTGTATTACGGGATGAATGGAAATGAAA
GTTGCTGACAAACACATGTAAACATGGAAAGTTATGAAGAATAGATTCGA
TACACAATCTGATTGAGAACTGTACGATTTGTAAAAATTAACAACGATAA
ATATTGAAAAAGCGTACATGGTGATGGTTGGTAACCATAGCAACAGATAC
CAATAACGCGCCGAATCTCTATTTTCTATATCGTCGATCCAATTAATGAC
ATTAGTATTTGTTGTATGTATTGCATCTAGAAGTAGAATGAATTGTAACA
CTATATATCCGAAAGCAGCGTTCAAACCAAAGAAATGCCACACTTCACCC
GTGTAGTATGACCTGGGTACGAATAAATAACCAATCACGATCGATGCTAA
AAGTAACATTTTAGTGAACCAGAATTTATTATGTATGATGGCGCGGTTTG
ATTTACTGCTTTGTACATTAATGGTGAATATTCCCAAGAGTAAGAAAAAG
CAGAACGTTCCGAAGAATATCCGATACACTGGCGCTGGCCCATGAATAAA
TTCACAATATTTGTATCCAATTTTCGGACAAACTGTCCGAGATAAGATTC
TCCAACAAAACGAAGATAGTAATATCATTGAAACAATTGTCACGACAAAA
AGTGCTCCCACATAGCGCATGCGCGTGGCTATTGAGGAACGGATTTTTGG
TAGTGAAAGAGCATTCCATAGTAAAGGCAGTGGCCAGGTGCAACAGTAGA
ATAATTCGTCAATTCTTGAAATTCTTAACAGTATGTTTTCACCAGTGTTG
GCCATGTCTTTAACAAGATTTGATCAACCACTAAGCTCTAAAATTACTGA
TTGATGAATGTCAATCAATAATATCCATCATCCATAAAATTCATTTTTGC
TTTCATTGCAAGTAGCTTGTAAGACTAACAAACCGTACAACTTTTCAAGT
AATAGTTTAAGATCAATAGATCGCTTTATGAAGGCTCAACACCCTTTTCA
AGAACTTTTTCAGTGTTGCTGAAGTTTGCAATGTTCAGTTCTGTTAGTTT
CCTAAACTCCACTGTTTCCCTCAAATCTTCATTTTCGATATTCCATAGGA
TTTAGTTATGCTGAAATGAGCAACAGACTTTCTTGTTTAATTGTTTCTAA
TTGTTTTTAATGGTTTAAACTTTTGTTGAGTATTTTTCAGTATATTTTTT
ATTGTTGTTTTGTTTTGTTTTGTTTTGCTTGTTTTTGTTTGAATATTGTT
TTTTAGTTTGTAGTGTATGTCGTTTGTAATTACTCTCGGGTACTTAATAG
CCGTCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048342TCONS_00048342Clytia hemisphaericatranscript
TCONS_00048341TCONS_00048341Clytia hemisphaericatranscript
TCONS_00048340TCONS_00048340Clytia hemisphaericatranscript
TCONS_00048339TCONS_00048339Clytia hemisphaericatranscript
TCONS_00048338TCONS_00048338Clytia hemisphaericatranscript
TCONS_00048337TCONS_00048337Clytia hemisphaericatranscript
TCONS_00048336TCONS_00048336Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:62935..72942 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.16	30.07	12.45	8.66	7.46	6.3	7.26	6.74	3.84	4.05	5.48	4.71	4.89	3.89	4.97	7.5	9.94	12.43	2.95	2.95	9.42	8.48	20.22	16.27	6.73	9.6	3.43	2.97	9.21	11.09