XLOC_030555 (gene) - C. hemisphaerica

Overview
NameXLOC_030555
Unique NameXLOC_030555
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_14:805017..812772+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030555 ID=XLOC_030555|Name=XLOC_030555|organism=Clytia hemisphaerica|type=gene|length=7756bp|location=Sequence derived from alignment at scaffold_14:805017..812772+ (Clytia hemisphaerica)
CAGGCAGATGGAAATTCCGTTGATGATGGCATGTTGTATTcaataatata acaataatGACAAAAGACAATTAAAAGTTGACAATTAAATCGAAGAGAAC ATTGACGACAAGACAAGAGCTGCTCAATTACAAAAGGAAGGAACTCCGTG CAGTCACGCGGGAATATGGTGTAACTTGGTCACTCTCACTTAGACACGTC TATAATTCACTTTCATCAATTGTATTTGCGTGCGACTGACCAAGTATCCT ATTTTAGCCTCTCTCCGCTTAGCGTTCTAGAAGCTAAAAAAATGGTAGCC GTAGTAGCGTAATGGTAGTGGCACGCCAGCAGCAAAGTTGCATTTTCGAG ATTGAATCTGTATATACATGTTAGAAATTGGAGATGTCCAACGAAAAAAT TTGCCCTCATTGTAATGAAGAACTCAGCAGACAAGCACTTCATCGTCATA AGCAGCTTTACTATAGAAATGgcttttggaaaaagaaaaaaagtgataaa CAAGGTAAGATGTTTTTGTAGTTTTATTTATATAATATGTCTAGCTCAGT TAGGTCGATAGGTTAACTCGCAGTATACGTCAATATCGTCATATACAGGG ATATTGCTGTATACAACGAGTGACGCTTGACGTATACACCAATATCGGCT TATATATTAGTATAATGAGCCCATTCACAATTTTAAAGTCCTCATACTGC CCCATACagtggtttttattttttataaaaccgGCAGGGTTGTGTTTGCT CTCTACACTCCAGATAGGAGGTTAAGAAATTTTCCCTTGTGTGCTTTTTT GGGGCGatcatcaaaaatatgttctgttcgcATTATATAAAACATCTTAA AATCCAGTGGTCGGTATATACCGTCAACCGCTCTAactacgaccctcgac atggcccgagaattctcgggccaaaacttttattggaattcgcgtaaagc ccgcgtatggcccgagctggcccgagaattcgggccaTGTTTGGGCCACA CGCaggccacgcacgggccacacgcaggccacgcacgggccacacgcagg ccaatttttgaaaacatgatttaaacaggcgtgtaatttcaggactgaat ttttttaacattttctttgagaaaaacttggtttctcttaattatgttaa atatatgaatgttgtaaattcatataaatattaaatatcttatttggtat gaaagcatagttataaatatacttagggtggaaatatttgctagtaaact gggcctggttttaaactgaagcgtgtccacgcattgagtttaaagcccga agggctagagttcaatctctaacctttctcaggcaagaaaaagtgaagcc ttaaaaaatgcgccgcatttttgatgACATTTGACGACatattgaatcta gcaattcctttgtttatgattgatattttttttagaaatttagcggtaaa ttttagtttcaatctgtcatttgtgtaaaaaccaggcaagccgctcaagg ccgcgcaactttggtaggatttgttggcttcaaatcctaccgaAGAGGCC TGAGAATTCTcaggccatgtcgagggtcgtctcTAACTTAGGCCGAGATG TTTTGATAACAAACAttatcttttgtcttttttattgttttcttttgttt gtatCTGGTAATAAGCTAATTTTGATCAGAGCCAAAATTCAAGTACTTCA ATAAGCTTTATGAGTTTTGCGACTATGTTATTTAAGATGACTTTAGAGGT TCGGTAAAATGATGGCCTAATTGCTGTCCCGTGTTTTATCAGACTGTCCT AAGTTAGAGACGTTGACGGTAATTCCTCTAGTTTTTAAGATTGAATTAAA CCAGACTCTCCCACTCGATACAATCGATAACTTTTCCAATCAATGGTCAA tcgattgtttcagttaatcaATTAGGTAATCGAGCCTTCTTTGAAATTCT GATTATAGATTGGTCACCAATCGGTAATCTAATCTATTACCTATCAATTG TTAATTGATTGATCATCGATTGATAAATATCATCAATTGGCTATCGATTG TTAATATGTTCTACAGTAACCGATAACAAATCAATCATTTAAGAGTCACT CGATGGCCAGTCGGTTATTTACAGGCCAATTGAtgaccaatcaatcaatc aatcaatcaatcaatcaataggTAATCAAGCCTCGCTCAAAATCCTGATT ATTGATTGCCTATCGATTATCGAGACCAATCTGGACCAATCGATATTCAA TCCATCGGTTGGGCATCGATTGGAAAAAAGTATTGATTGTATCGAATGGG AAGGTCTGGATTAAATTAGAAATGGTTGctttacaaaaaataatttctac aTTTTTTCGACTTGTCCGACTTaggatttatgttttgaaggtgGTTTTGT CGGGGCGACGCTAATGGAACATATTATTGATTGTTGCCTAGCGAAACgtg tttttttggacttagcTTTCAGCTAACTCAACTTTCTTCATAGTATTATA CTCTTGGGTTCCTAATAAAACCCAAATTAATTTATGTTAATGTTTACTTT TAATGTTAACCGACTAACCCTACCTTTTGAGTAGTTTGGCGGGCAAAACA ACAAATCTTTTTTACTACTATTTTATTTTAGTCCTTTGTATAATTTTAAA GTTTGTCATCCTATATAATGCAATAatcatcaatttttattttcagatgt GAGACAAGGACATGATGACAATTCAAAACGCAAAGTAAGTAATAAtggat ttcaaaagttattactCTATACTACTTCGGGTAAAAATTGAGAGATACCA GACAcaggaaattttgaattaatcGGACATTTTTACCTGCACTTTTTAAG CTCTTCAAATATTGTTTTTTAAAGTACTTATAATATAACCACACATATCC TGAAACAactaaaaaaaaagacataggTTTTCTATTTTCATATACCAACA AAACTCCTACACAAATcaagtgtttttctttttaatcgtTTTTAACAACt taaaaagtcattaaattGTTCACGACATTCACAATTGAACTATTTTATTG TCTCTCATTAATAGCAACAgagtaaaagtacaaaataaaagtcaatttct aaaagaaaatcaaacaaaaattctaCCATTGTATAATACCAcgtggtata tcaggaattgtTCAATGGCTGTTTTGCCTACTGGTATATAATAATCAAAA TTATATCCACATGGGGGAACTCCTAAAAGAAAGTAGACAGGTAGAGAAGA CTAAATGGGGTTTTTAAAATCAGCTTTGAGCACGAAAACCTGCAGGACAC CATCTTTTTacagaaatatttttatctatgATAATTTTGTCTTACTTTAA AGCATAACATTTTGTTTTAGCATGATGTTATGGCTccagaagaaaatttt aatgataatgGAAATGATGACCCAATGAGTGAAGAATCATCAGATACGGT ATGTATTTTTGAATTGTTCGAAAGTTTATCAATTgcttttaaaaatttac tcTGTTATGAGATATAAGGTCTGTCAAAGAGTTCAATACCTGCTTCTTTT ACAGagggctgagaatgagaaatgTCACAAAAAAGATATTGCAAAAATAA CTTAACTTATATGCAATAAGTAAAGGCAAAAATAGAGCAAATGATCTTGT AATATCAatgatttcttgatttcttcTTATTTACAGGACGATACTCCAGA TCACAGAATTGATGCAGAAGTTTTGGATGATACTGATTCGTGTGACGAAT TTGAAGATACCTCTCAAAACGAATCAATTATTTTTGATGATGGAAACGAA AAAATCATTATTATGCTTATGTACCAACTTTTTGCCCTTCAAACAACATA CTCAATTTCAGACAATGTTATGGGGATCTTGTTGAAATTGTTCCACTCGT TTTTGACACAATTGAAGTCGCATGACGGTGTTGATGATAAATTGGAAAGG ACAATTGAGTTGTTTCCTTCAAGCCTCTTCCTTGCTAAAAAGAAGATTAA CTTAGAAAATAATTCTTTCGTTAAGTATGTTAGCTGTGGAAAATGCCACT CTATATACAAGCCAGAAGACTGCTATTACGAAAAAGATGGTAAAAGAGAA AGTCACTGTTGTACCCACGTTCCATATCCTGACCATCCTCAAGCACGCTT TAGAGAGCCATGTGGCGAAACACTGATGAAATCTGTTTCAAGTGGTGATG GTAAAAAGAATTATCTTCATCCAAAAAGGTTATATTGTTATCAACCCTTA AAACAGTCTCTACAGAACCTGATTAGTAGGAATGATCTTAGAGAAAAACT TTTGGGTGGCCCATCAAAAGGTCCCGAAGGCGTTTTGTTTGACACCATTG ATGGCAAGTTTTGGAAAGAATTTAAAGACAATAATGGGGAAATTTACTTC AAAGACCCTCGAAACCTTGGAGCCATTTTAAATATAGACTGGTTTCAACC ATTTGACGGTGTGGAGTATAGCTGTGGAGTCATATATATGGCACTCCTTA ATCTTCCAAGAGAGTTGAGGTTTCGATGGGAGAACATAACAACTGTTGGC ATCATCCCTGGCCCAAACGAACCTTCACTCAATGTCAACAGTTATGTCAA ACCTCTTGTCGACGATTTGCTGACGCTTTGGCAAGGAGATATGTTTGAGG AGAAAGAATCTAGAGCTATGTACAAGTTCGCTCTTTGTTGTGTATCTTCT GACCTTCCAGCTACAAGAAAATTATGTGGTTTTGTTTCATACAATGCAAA ACAAGGTATAAATCATAGAAATTTAGTATGCGCATTTGCTTTTGTTTTAT CCATTTCATTTTGCGGAAAGGAGTCTGACCCCCCTTGTTAAATGATCTCC CCTTCTTGACATCCCCAACTTTTTAAAATGTCTATCCCCAAGGGTTTTgt gctaaattttcaaaaatacatagTGTATAGTGCGATCTGCTAATCCCCTT CTCGCTGCTACCCCCTTCTTAAAATCAATCCTCTGTTTTCTCTATATATT TGTTTATGGTAAAAGGgagggaaacagtaaagaaaaatgaagtctggtaa atataataccacttttttagggaaataaaagtaacagtgctggaaaataa tctacaatatatgggGCTTACTTAAACGATCCCCCTTCCTTGCTACCccc tttttaattaaattttctgAAGGTGTTatccccccttaagaaagggtgAT TCGAACTAtgcatttaaattttttatatgctcatgttagtgttgaaatct ttttgatttaTTATAAACAAATATTGTAAAACTTCAATCGATTTTTTATA AAAGCGTCATCAATTATAGGCTGGGGTTAGGGTTTATGGGTAATGGTTTT TCTTGTGGTCCAagtattgaaatcataaaatcatTTTAAACTGGTGTGCT TTCTACTGGACCTCATTAACATTCAGGCGTAATAGTAATACAACGTTGAC GCATATAAATCATTTTTACTCGCGTACTCAACCATCACTGGATCACTATT AAGCtgattttaaatcttaaattgtTAGAGAACATCTCCACAGCTAGAAT GAAGCTacgtttttctcttttcttaaTATTGTAGGTTGTAGTAAATGTTT TAAACAATTCGAACACGATGGTCCTGTGGGAACTACTAAAACTGACTATT CTGGCTTCGACGAAGAGAACTGGACTGAGAGGGACCCTAAAGAACATGTC AGGTTGGCGTTCAAACACAAAGCGGCGAAAACACTAGCTGAAGCAAAAGA AACAGAACGTGATTATGGTGTTAGATTTTCTGAATTGTGTCGTCTACCGT ATTACGATCCGGTTCGTTGTCACCTCATCGATCCAATGCATTGTCTCCTC CTAGGTGTAGCCAAGAACACGTTGAAAATCTGGATAAAAGTTAGTATAAT TCTCATTACTTCCTTTACTATAAGCAACTTGTCTTGCAGGTTTGAAATTG CCCAGTATTGGTCTCATATTTAAAACAGCTTTCCTCATCACCACCATTTC AAGTTGATTTATTCATAAATTTACGCGGAACAAACAATTTTACAGTTTTC CAGCGCTGGAAATAGAGTTTTCACACCCGTGGGATctgatgactttttcc tgtgAATGAGACAAGGGTGCTATCAATATTTCTCATTCAGGAATGAGACA AGGGTGTGGTCAATGTTTCTCATTCAGGAATGAGACAAGGGTGCTATCAA TGTTTCTCATTCAGGAATGAGACGAGGGTGTTTTAATGATTCTCATTCAG GAATGAGACAAGGGTGTGGTCAATGTTTCTGATTTAGGAGACATGGGTGC TATCAATATTAGGTACCCGCAAGAACctcttaagaacatttaagcctaaa aataaaaataataacaactaagcctgagccaaaatttaatggttctaatc aaaataaaatattttatttcatagACCGACGTTCTGACGAAGGAGAAGCT GGAAGCTGCAGACGCTCAGATGAAGCTCATCAAACTTCCACCTGGTTATG GTGTTCTTCCAAGTGCTGTGTCAGCGGCCTTTCGAAAAATGAAATCCGAT GAGTACAAAACATGGGTGTTGTACGTGtcattgtttgttttgaaagatct tcttcCTAAAGCTCATTACAATATGTGGCAAGATTTTGTACGTGCTTGCC AGCTATTGATCAAGCCCTACATTATCGTCGAGGATGTCGAAGAGGCCCAC AAATTGCTAAAGTCTTTCAACGAGAACTTCGAAAAAGTCATCGGTCCTGA TAAATGCGTCCCAAACATGCACATGATGATGCACATAAAAGgctgtattt tagattttgggCCAGTATATGCATTTTGGTGTTATTCATTCGAGCGTTAC AATGGTAAACTAGGTGAATACCAAACTAACAACAAGAGCATTACGATGCA ACTAATGCGACAATTTCTGGACAATCATTCCATTGTCACTGCCTACCAAA AGCTTGATATAGATGATATTCCGTCCTTTGAAGAGTTGAAGCTGATCTCC AACGTTGACGAAAATTTGAAGCATCTGGTAGCACTTTGCAGCTCTAGAGT CGGCATAGTCGATATTTCCTCATTGCTGTTATCAAACCATTCTACTTTTC TCTCTGGAGCGAAATTCCGTCGTATCCGTAAAGATGACGCCGAGTGCATC GCAGAATATCTTAAAGCTGTGTTTTCTACTGATGATCTATCAATTGAGCG CATCGTTCAAGGCTACTCACGAATAAAAGTTGGTAGGGATGTAATAGCTG TTTCGAGTTACAGAAGAAATGATAACCGCaatcaattcatttttatttcg tatcaaaatcaaaatcacccTGGATTTGTTACAGATATTGTCGATGTCCC TGTTAACATTTCTGGAAATGAGTTTCACAtccctttttttcaaatgagtC TTTTTAACACTCACCAGTATAAGAACTTTTATGGAGAAGACTGTCCTATG AAAATTTGGAACACCACCATTATGACAGAAATCTTTGTCCCTGTAGTGGC CATGAAAGGAAAATGTGTTGTCATTAAAGACGATTGTAAGTTTGATCGTA TACCAATAGCAAATGGCCGAGTGGCTAGAGCTAACTTTGAAGATATCGTT TATTTTGTATTAGAAATGTAGATTTTAATTATAGATAGATATAGGCTAAG AATTTAAGCCAAATTTTGATAGTTTAAACtgacgaaattttttttttcgt actTTGAGCAGCTTGGAGGCctacttttttcataaaaagccTGCAATTCA TAGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048023TCONS_00048023Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048023-proteinTCONS_00048023-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:805017..812772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.33 0.14 0.15 2.64 1.85 2.3 2.42 1.96 2.84 2.37 2.17 1.39 1.72 0.88 1.21 0.85 0.98 0.89 1.38 1.57 1.55 0.86 1.14 1.81 1.89 1.74 1.24 1.15 0.98