XLOC_030554 (gene) - C. hemisphaerica

Overview
NameXLOC_030554
Unique NameXLOC_030554
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_14:763881..771228+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030554 ID=XLOC_030554|Name=XLOC_030554|organism=Clytia hemisphaerica|type=gene|length=7348bp|location=Sequence derived from alignment at scaffold_14:763881..771228+ (Clytia hemisphaerica)
GGATCCTgccttaaaataaaaacatctaTTCATTCATTTACAAAATACAC GTCATGAGTTTTCATGCACATGATTAATTACTTTTCAATACAATATGGTC TTTTATTCCACATCAACTTCAAAGAGCAAACAGTCATCTTTCAAAAACCC ATCAATATCCAATTTATTTAGCTCAATAAAAATTGGTCAACCTAAACATT TCCTTCTttgctttttgaaaactttctgaGCCTTTCTTAGGATTAATTTC TTCGATGTGGTCTTTGCTTCTGTCTTGTTGATTGATTGAAGTGATTGATT AGAGTGCAGATATTATTTGGGTCAAAGATAACAaattattactttatttt ttaaagtaaaaaaacttACNATTATTTGGGTCAAAGATAACAAATTATTA CTTTAATTTTTAAGGTAGAAAATTTTAAAGTAAACAAGTAATTTTAGCTA TTTCTACAAAACATAATGAATCACAGTATAATTATCATAATATATTAAAC AATTTGAACTATAACATTACCTTAGTTTTTTATCTTAGGATCCTgcctta aaataaaaacatcaattcatttatttacaaaatacaCGTCATGAGTTTTC ATGCACATATAATTAAATACTTTTTAATATGGTCTTTTATTCCACATCAA CTTCAAAGAACAAACATAGTCTGGCTGATTTATGAAATAAAAGAGGTcaa ccttgaaaaaatttcgGCACTAGGTTTCTTGGTACCGTTagaagcgcaat tttatgtagattaacatactcagagcctcacgaTGAGGCCCTTGGGCAAA ACATTTTATGAAATCAAACCTGAGGGAtacttttttgcccaaaatgcctg gaattggaattttcgtaacaAAGCTGACCTATACGTCATGAACTTTTAAG GCCTAAAAAACTCCTTTGATTAAATCTTAATTAGTATTTATGAATTGCAT TAAAATAAAGACTtcctaaaaatattaaaattcggGTTTTTCGGGAATAA TGGGCcataaaaatcggaaaatcggggaaactgcTCCGAAAACCTCAATA GATATTGAAAATATGACAAACTAACGCTTATTAATATCATGACAGGTTGA CAAATCTAGCTCTAAACTTCTGAAACCTTGTGAAAGCCAAAATAATGGTA AGGATCTAGTTCTTcaggaaaatcggatttttaaaatccaaaaatcggga aataaATGTTACAAAACTTAACTTCTCTTTTAGAAATTCACATAAGTATT TCAGAAAGTGCTAGACATAAAATGGTCACAACTTTTGAACTTCTTTTAAG TAAAGTAACGTTAAAAAGTTATGAAATAGGTTTTCGGTGAAAACGGGCTC ACATAATCGGGAAATTGGGCACAGAGAATCGGGAAATTGAGAAATAAAAG ATAAATTATGCTTTAAAAATTCATGAGATTTCTCAATCTTTAAGTTTGTG AACTTTGCTCTTTGAAAGCCAGGGAttaaaaatgctttgaaaatcGGAAT AAACATTAGAAATGAAATAACTTGTTGAGtataaaaatcggggaaacttt tCAAGAAGCCTAAAtgtagtaaaataaaaattatgtaaTACTAAGTTTTG ATATCACAAAATCTATTAGAAAGTCTAAACTAGTGTTTCCAGAATGTCAA AGATATTCCTCTCACTCGTCAAAGGCTCGTCAGTTTCATTATCTGAATCG GGTGGTGGAGCTTCTGCGTTTTAACACCCTTCACCATGACACCCACCACA TGCAGCATCACAATAAAGCCCATTGCGACATAAGTTTGAGCTGCATGGTC GCCGGGAACTTGTTTTGCAATTGCATCGTACTACTTTAAGAAGCCACTTT GATGCATAGGATAGTCCTCTTTCCACAATCAACACATCTGCATCACCGTC AATTTGGTCTGTCAGGAATCCTTGCTTCTTGAACACAGACGAAAGCATTT TGATCAACTGAACTTTGTTGGATGGGCTAGATAAGAACAATTCTCTGTTG GTAGTCACTTTACGATCTAGTGAGATGGCAACAGAAGCTGATGTTTTCCC CGATCGTCGATCGTGTTCTTGTCCTTTTGTTGACATTTCATCCTCGTATC TATCGAAAACAATGACGACAGTAGAGTAACAATTGAAATTGTTCTTGAGG AAGTTGAAATACTCGTCGATCACCGCTGAATGTGTTGTTTTCGGCCACGA GTTTTTGTGTAGCAATGAACCGCCATCAACGATGCATACATCGTGAGATT TTAATTGGCATGCGTTTCTTTTGTTGATGAAACAATAAACTCACCGGTTT CGTGAGCTGAGAACCAGTTGCTCTGTCTCCGAGATACCACGTTGGCATCG TTGGATTCATCAGGCGGTAACCTCCACAGCGTCTTCTGTTTCGCCCCCTT GCTGCGACAGACTATGGAGGTGGAGGGCACCTCCCATGAGGTATCCAACG TGGTGACTGACTTCTTCAGTTTGCAACGTTTCTCTTGGTCCAAATAAACC GACTTGCATTCTCAACAGTTTCCTCGATCTGCTCAaccattttttttcct tcagtACGATTAAAACCAAGATGCTTTAGTTCTGAGACCAACAAAACCTC TGAATCCGACTTCAACGGGTAGACAAGTGACAGTCCAACCGTGANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGA CCCAGCCAGTTCCTTATCTTCAGGGACATTTTCTGTTGAATAATATTCAC CCTTGAAACAGCAACTTCGTAGAAATTTTAACCAACATCCTCAGTGAAGT TGCCAAGAGCAGTTAGTCGACTAAACAATATTGTTGGACTTGGAATCCCT CTTCCAACGTCTTCGGGGCTTCGGCGACGTCACAGTTAATCTCTGGCCCA GCGATCAGCCCACTCGAGAGACTCTTCAATTCAGGCTCTGTTTTTTCGAA CGGTTCGTGGTTGCCAAACCAATTCTTCACGGTAGCGAAATCTTTATCGC CACACTTCATTCTGCTCAACGAAAGATTGACATGTTGCTCGCTTGTTTTA CGGCATGCACCGGTAAGGGCTGACATAGCGTTGTGGATGTCGGCAGATCT GTGGATGCCTCCGATCCGAAGTTGACTCGGCGATTCCACTCCCACGATTG AGCCCTCCGTTGCTTTTGATGGGTCGCATTATTATCTGCTCGATGATCAA ATCCGACCATAAACCAGCCCAAAATTTATCGCTTCGTTTCACAGTGTGGT AATCATTTGAAAACTGCTTGTAAACCCAAGTGTGAGTTGTCTTGAGCTCG AGCATATTTTAGAGGTGTAGCCGTGTGATCTTAGCGTAATGGATGTGACC GGTTGCTGTAAACAGGTTGATCATCCGAGAAAGGGTGAAAAGGTAAAGGT TCCAATCTCCTGTCCTTTCTGATCTAATGAAATCCTTTACAACTTTCATG TAATCCAGATATTGCAACCATAATTTCGCAGTACGTGAGCATGTTTTCAG ATCATCTTTGTAATTTTCCATAAGTTTCGACAGTGTTGGATATCTGCTCA TGTCCAAATCAATGGTGGGATCAACAGCATTGGCAATCATGTTCAGATCA GTTGTCAGATCTTCGATTTCTACAGCCTCATCATCAGAACCAACAAGTGT TGACATCAATTTTCAAACAAGAGCTGATTCAACTAGAAAATGTGCCCTCA GGGCTCTGGCAATGGCTTTACTACTTATGATGTGTAAAGGATGGGGTATA TTATTGAAAAGAGGAAATaaagcaatgcaatgtctttgtcaaaaatcaaa accaatccGATAATTGTTCAGCCTGGCAAGGTCTGGTCGATcttcatatt ttcaaagaaaatcgaggttttttcaaacaatttccccAATTTCCCGATTT CTGGACCccgtttttccaaaaaaaaaggcgatttttaatatttttaagaa gTCCTTATTTTAATGCAATTCATAAATTCTAATTAAGATTTAATCAAAGG AGTTTTTTAGGCCTTAAAAGTTCATGACGTATGGGTCAACTTTGTTACGA AAATTCAAATTCCGGTCATTTTGGGCTAAAAAGTACCCCTCAGGTTTGAT TTCAtaagattttttgcacaaggGCCTCAtcgtgaggctctgagtatgtt aatctacataaaattgcgcttctAACGGTACCAAGAAACCTAGTGCGGAA ATTTTTCAAGGTCAAATCCTATTTCAGCCAGACTAacagtcatcttttaa aaaccCATCAATATCCAATCTATTTAGTTCAATAAACATTGGGCACCCTG AAGCTATGTTCATTTCCCTCTTTGGTTTGTGAAAACTTTCTGATCCTTTC TTAGGATTAATTTCTATGATGTGGTCTTTGCTTCTGTCTTGTTGATTGAT TGAAGTGATTGATTAGAGTGCAGATATTATTTGGGTCAAAGATAACAAAT TATTACTTTAATTTTTAAGGTAGAAAATTTTAAAGTAAACAAGTAATTTT AGCTATTTCTACAAAACATAATGAATCACAGTATAATTATCATAATATAT TAAACAATTNcaaaaaaatttgcggaatttcggaattggtaaaagatatt caaaatttgcggaattttcgacaaaaatactgaatttcaaaggaattttc ggtgacgaaattttggttcaatttataTTACTTTATTCTTTAAGGTAAAA AATCTTACAGTAAACAAGTAATTTTAGCTATTTCTACAAAACATAATGAA TCACAGTATAATTATCataatatattaaaaaatttgaactATAACATTAC CTTAGTTTTCTATCTTAGGATCCTGCCTTAGAATAAAAACatcttttcat ttatttacaaaatacaCGTCATGAGTTTTCATGCACATATAATTAATTAC TTTTTCAATACTATATGGTCTTTATTCCACATCAACTTCAAAGAACAAac agtcatcttttaaaaaccCATCAATATCCAATCTATTTAGTTCAATAAAC ATTGGGCACCCTGAAGCTATGTTCATTTCCTTCTTtggtttttgaaaact ttctgaTCCTTTCTTAGGATTAATTTCTTCGATGTGGTCTTTGCTCCTGT TTTGTTGATTGATCAAagtgaatttgattttcttttggaaaggcCATTCC AAGATGTTGTCATAGTCTGATTTCATAAGAACCAAGAATAGTGATAAGTG TGTTCCTTCTCCTACTCCATCTCCGTTTAGATAGGCCCTTAAACAAAATT TGTATCCGTATTCACTTGTATAGCATGGTGCACTATGTAAAGCACTGATA TCTCCAACTAAGGTCTGTTGGCGTCGCTGTCTAAAGTCGTCTATTTTCCA TAGCAATTTCCCATTCATTCGACTATTTTCAAGGAGTTGAAGACGCAGAT CAACGTCGTTGATGTTTCTATGATTCTCCTCTGCACATTTATGTAATTTC CTTAAATCTTGTCGTTGTGGTTGAACCATTTGCCTTGAAGCTTCCAGCAT TTGTTCGAAATCTTTCTTCATATTTGCCATttcgttttgaaagttttcaa attgGATCATACATCTTTGTTTGAACATTTCATAATTTATATCGGCTGAT TCCAATGCCATTTGTAGTTCGTCAACCCTTGATTTcagttctttgttttc ttgttgttCCTCGAGTAATTGTTTGTGAAGGCATTCCATATTTACTGGTG TTGTTGTTGAGTCGATCATTTTTCTTCGGTTCAATCGATTTATTTTTTCT GCCAATATTTCCGTCCTAGGTACACTAGTACCAATCAGTTTTTAGAATAc tcaaaaattgagctttttgatactttttatgATTCCTTTGTGATAGTATA CCAGGTTTTTTGTCTTCTTTGGTTGAACGAGTGGGTTTGTCTTTGATTTC TGTTGATAAAGAAAGACTAATTATCATATATAGACAAAGTCTACGGTGTC CGAACGCAAAACAGTACCCTTTTCATTAGACAAGGTGCAAAAACTATCAG ATTACCATGACACGCAATTGTAACATGATAATATTATTCTAAAGCAGGCT TAAGTATTGAGCAATATGCCTCAATAAGAAAAACATTGAATATAACGTAA CATAAACAACAAGATCAAATACAAAAATACGTCAACTCgcttatttctta gaaaaatcaaatttaaagacCAGGACAAAACCTCGTCAATTTTACGtcac aaaaatctcaaatgtaCTTTTATGAGGCTGTAAGGCTTGGAAATCTGTCT TCTGGAACGTGTCAAGCCAAACCCGAAAATTAGTTTGAATCTCGCTGATT TACTTATGCAGTTGCctaattctctaattcgatctccaAGGTATGAAGAC TATTCTCCGAATTAGAATAAAATTCGAATTCCAGAGAGCATTCTACACTA CTTTCCAGCTGAAAAAGATCAATGCTTGAATTCGAATTAAATCGAATTTA AGAACGATCCGAATTATAGAGGGTTGACTGTATTCACAACTGAAAAAACC TTACCTGATTTTTGTGGAAGATTCTCCCTCTTGTTAACTCCTCCAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048021TCONS_00048021Clytia hemisphaericatranscript
TCONS_00048022TCONS_00048022Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:763881..771228 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0 0.05 0.04 0.09 0 0.17 0.28 0.84 2.55 0.93 19.8 137.6 116.04 164.75 105.36 28.13 72.26 51.65 52.68 0.3 0.9 0.93 0.33 2.43 0.54 138.87 157.67 49.86 36.4