XLOC_030408 (gene) - C. hemisphaerica

Overview
NameXLOC_030408
Unique NameXLOC_030408
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_136:95046..99496-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030408 ID=XLOC_030408|Name=XLOC_030408|organism=Clytia hemisphaerica|type=gene|length=4451bp|location=Sequence derived from alignment at scaffold_136:95046..99496- (Clytia hemisphaerica)
GCTCGCTCCGCTGTTTCTATACGAAGCTAGCCCTCAATAGAAAACTAAAT
CTCCCTTCAAAGGACTGTAACTTTAAACTCGAGTTTAATCGCTCAGCTCT
GCTTGATTTATTTTGAAGCTCTATATCCACTATGCTTTACGATTATATCT
CATTTGACAAGACACGGAGAGGGTTCGGCTGATTTTTGGTTGACTGTGTT
TCAGTTTTACACTCAACTTTCATTTTGGGTCATCTGTTATCTCTGTCAAG
TCAAATTCAACATGTCTATTACTTGCTACTTCTCAACTGTTTCCAGCAAC
ATGGAGGTAAAGTCTTCTTTTGATTCTGTTTGATTTTATCCAAGAGTTTA
GGCCTCATAGTCATATGATATTTCCAGCAACCTCAGTCCCAAAGTAAAGT
CTAGAAAGACATGAAATAGAAGGCTCTGTGTAATGGACAGTTCCAGAAAA
AGACCATTACCCCCTGAAGACAACATGGTTTTTTGGAATTTTTTCCACTT
GGAAATCCTAAGAAATTTTGGAAAAGGTTCTTTCTAAGGATTTTCCTAAT
TATTTGGTTGTCATCTGTATCGGGAAATCCAAGACTTTTCCTTAAAAAGA
ATCTTTAATGTTGAGGAAATGTTGAAGTTTTCAAAAGCTAATTGTTATGG
ATATCCATGTGGGACACTTGGAACAGCCCAATCAATAGCCCCCCCTGCAT
TTTTAAGTCATTGCCTTGGACTATAAACGCTATAAGTTACTAAATATCCT
CTAGCTGTATAACTATGCCCATTTGGTGAGTTGAGGGTACTGTGAAGTCG
GATAACTTGCATCAATGGAGGCTAACATACATAGCCCTCAAATGAGTGAC
CTCTTCTGGTCCTTAAGTTAAAATACAAAGTTAAATCAAAACAAAAATGG
TAGAGTAGAGCTGTGAGCGAAACTGCGTAGTTCATTTGTTTTGAAATTTT
GCTGCTTTGATTGGTTAGTCATTTGAGGACTAAGCATGTTAGCCTCCATT
GATGCAAGTTACCCGACTTCACGATACCAAGCCATTTTTCAGGGGTGGTT
GATAAAATACCACAGCTTTATATAAAGAGCTGTCACAGAAAGACAACACG
ATGTCTGAGAATTTATTACAGCTCCCCTCCCCTTTGCAAAATCTAATCTT
TTCCAGTTCTTCTTCTGGTGGGTTGTAACCCTCTTTGACCATTTGAAAGC
CATTAATAATACCATAGACCTTTTCGCCTTTCCATCCGCCATCTTGAATT
GTATGCAAAAATATAGGAACGAAAAAGCTGTGGTTTGATTTAGTTGGAAA
ATATGCAAAACATATGCAAGTTTACACAAAGATTAAAAAGACAACAAAGC
ATCTTATAAATAAATTTTATAATCATTAGAACAATNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAAAGCCTTTTAGGAATTTGTTCTTAAAGACATTGCA
TATTCTGTTTTCATGCCATTAAAAAATTCCACGAAGACGGAGTACACACA
TCAACTTTCAAAACATGCAAACTGAAAGAAGTAATTATGACGTCACTCAT
TCAGCGGGTTCAGATCGATGTTTTGATTTGATCGTTTGGCGGTTCTATTC
CCAGGAGAATAATTTACCGTCAGCCGAATAAGGATTATTTTTGTACCTTC
GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTATTTTTGTACCTTCGTGGGTGATTTTTC
AGCTTGAGTTTATGTCTAATGTTATGGTTTTTTGAAGTGCTTGTTCTAAG
AAGTGGGCGAATTTGATTATTTTTTCTAGTTTTCAAAAGAAGCAAATTTA
ATCTTTCTTCTACAAGATTACTTTAATATAATGCTAATTATGCATGTAAG
TTTTATATTAATACTTTCTTTTTGCATATGTTTTGCATACTTTCTAAGGG
AATTTCACCACGGCAATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGCTTGTTAATTTTT
CAATTTTTTTCCAACCCCTCGGACGTTATTAGGACCCCCTCATTTATTAA
TTTTTGAAAAAATTCCCAGCTACCAAAAGGAAAGTTCCTTGTTTTACTCT
AAAAAGCCTAAATTTAGTCAATTTTGACCCTTTTTAGGGTTTTTTAAGGT
CTATTTTCCAACCCCCGGTAATTATGCCCCCCGTTTATTTAATTTGAAAG
ACCCAGACGCCGACCCATTTACATGTGTGGAATTTGAATTCATGTATAAA
ACATGAAATTTGGTCAACTTGTACCAAAATTACGAGGTTTTTAAGTTTTG
CCTGGAAAGGCTTATGATGACGTCATCAAAAAACTTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTACTGTTTAAAATTAAGTTTTAGACCC
TCTAAGGATCATCTGTGCCAAATTTCATGCTTTAATCACCATCTGAAGTA
TTTTTGTGCTAACAGACCTCACTAGTACCCACGAAAATATATATAAAAAG
GTAAATAATTATATAATTTTTAAAAATTGAAAAAAATATTTTTTCTTTAA
TATCAACCCTTCTCAGTCTAATGCAGGGTACCAATCCTACCTTTCTGACA
ACACTTCCCCCAATTCTGGTCAAATTGTCAAAATGAGCTAATAGAAATTC
AGCCACCAAAAATTTATTCATTTTTCAGATCAAGAAACATCAACAGAAGA
TTCAAATGGTGTTGGATGGCAAGAAAATCCAATACACAGTCGTTGATATT
TCTGCTTCAGAAGAAGGCAAAGCAAAAATGAGAGAGATTGCTGGTGACCC
AAAGGCTTTACCACCACAAGTTGCTAACGGTGACCAATACTGCGGGGTGA
GTCTTGATTTCATTTTTATCATTTTTACTCTTAAATTGTCTTTGATAATA
AAAAAGATTGATCTGGAAAAGATGCAAAAATCGACTTCGGGAAGATTGCC
CCTGGGTGCGGTCCATTTACATGGTCCATTTTCTCCTGTATTTTCCTATG
CGGAAAGAAATCTTGAATGATTATCTGTAACTTGTATGAAAAAGAAATTG
ATTTAACAAAACTCTCTGATTGAATGAAATAGTCTATATAATTATTACCT
CATTTTGAAACTTTTAAACTTACAACTTTACTTACTCACAGCCAATTAAT
TAACTCAATTTTGTTCTTTACAGTTTCTACTTAAGATATAAAACGTAATT
TACATATGATGGTATTTAGCAACTCTGCATTTTTTAAGGTAGATTTCAAT
ACCACATTCAATTTTATTTTTTCCCAACTTTTCTTCACAGGACTATGGTG
CATTTGATGCTGCAGTCGAAGAAGAAACATTGAACGAATTCCTGAAGTTA
TAAAATAATTATTCACTATTTTAAAAACATTAAAACATTCACACAGATCA
AATATCCCAACAAACACCAACGGTAAATGCATGATCGCTTAGTAAAAAGA
CAATACCTACGTAAACGCTATCTCAAAACTTCCATCTTGTCTCTTGTTTC
TTGTGATGAAGAGTTTACTCGAAAATATAATTTTATCACTATTTTATAGT
TTATTATATATGCCAAATATTATATTATTTGTTCCTATACTTTTTGTTCA
AGTTTTTATTTATTTTCCAGAATGAATTTTCTTAATTTTGTATTCTATTT
TCTTCTGTCAACTGTTCCTATTTCTAGTCTTTGTTACAACAAAATGAAAT
TTAACTGATGGTCCATCATTATTTGCAATTTATTTTTAAGTCTTGAAATA
CAAAATCAAATGTACATAAAATGTCAAATATTATAAACTATGAATTTCGA
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047760TCONS_00047760Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_136supercontigscaffold_136:95046..99496 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
698.22	754.52	259.39	219.14	153.27	110.25	268.21	264.3	295.46	277.88	281.2	311.31	515.48	506.02	347.27	327.07	495.94	563.97	737.55	588.87	328.17	303.94	490.44	430.68	264.97	298.95	271.13	229.15	274.63	277.84