XLOC_030159 (gene) - C. hemisphaerica

Overview
NameXLOC_030159
Unique NameXLOC_030159
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_126:49770..56176-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030159 ID=XLOC_030159|Name=XLOC_030159|organism=Clytia hemisphaerica|type=gene|length=6407bp|location=Sequence derived from alignment at scaffold_126:49770..56176- (Clytia hemisphaerica)
GCAAGTTGAACCCGACTATACACAACTGGAGTCGAACGATCAGGAACGCA AAAAAGGCAAAAGCAGTCAGCAGTGTTTATCCAACAACTTTATCATGCAA CTTATTGGTTTCACCAGGTCTTGTTTTGTTATCCTTGCTCGTTAGTATGT ACTTACCTCTTTGTGGTTTTTGCCTTCACAGCTTAGGTGTAAGTTATTTG ATAATGTTCACTCCCTGTTTTGTTTTTTGAGGGGGATCCTACCTTTTTGT TTTGTGGGACAATATACAATAGACCTAACTCTTGATACAAAAACTACGGA AAAACGCATATTTGGACTTTGTACCCTATGCTTCACACAAGCACTTAAGC CAAAGTCTCGCAAAGGCGAGACAAAAATCAGTTTTTTGAAGTTTGCAAAA AAACGTCACATATTTGTGGCCTATTTTCGCAACTATAGATGCTTTCATTG AGCGTCCCGTCAGCACCTTGGACTGACTACCCGAATTCCCCTCACATGGC ATGGGTTGACCTGGGCGAAGGTTCATTCACTTGCCAAGTGAACTGCTGCG AGTGGGAATCAAACCTGCCGGCGCACCACGACCCTCGACATGGCCCGAGA ATTCGGGCCATGTTCGGGCCATGTCAGAAGATTCCATATTTAAATTGATT CAACATGTCCAGTCAAACAAAATCGTACAAAATAAGATTTGTCTGTTTTG TTTATATCGCTCAAAAAAACTTTACGAGCCTTCCCCCCGTGGACACGCTT CAGTTTAAAACCAGGACCAGTTTACTAGCAAATATTTCCACCCTAACAGT TACATCAATATGCCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAAT CACTGAAAAGGACGCGAAAAAAAAAGACATAAGTGTGAGAACAGAGTAAT CATCCTCGTTAGAAAAAGTACCATTAGAAGTCATAAAAAATCAACCTGAA TAAATGCAATTGAAATTCCAGAGANNAGGAGGCTGAGTTTTAAACGAATC GTCAAGTTGAAACAAACGATAAATGTATCAAGGTCTGTTTTATTTACCCC CTGGTGACTTAACAAAAAAGACTTAACTCGATGTTACAATCCAATTATTG AAAGTTTGTCTCAGCCTTTTCTCAACTTCAGTTGAGCTAGAATCTGAGAA TGTCTGTGTGTGTGTGTGTGTTTGTTACAGTACCAAACCGAGGACTTGTT TATGATTTTGGCGGCCTATTCGAGGACTTTTTAGAGACCGAGGACCTACG CACACGTCCTCGAAATCTATTTGTCTGAAACCTCGTAAACGAGGTATTTA AGGCTAGAAAAGGCTTCTCTTTGAAAATTTAAAAAAAAAATTGATGTCCT CGAAAAAACATTTTGGACATGTGAAGTGCGGAGGGGTCTAAATCAGTTTT CACTTTTAAAACTTCCAGATGGTACAGAGCAATCTCCTTTACATCCGTAA TTATTGTTACAACGGAAGGACAGCCAGTTAATTAATTATCGAGAAAACAA TTTTCCTTTACGCATGTCACAAACGCGCTTTTGAGAATGTCCTCACTTTC GTATTTGAGACACATATGTCCTCACTTCCAACTTTAAGGCGCGTTTTTCC TCACCTTTTTTTACCGAAGTTGATCTTAGACCAATGAGCAAGATGAATGA TAATAGATCGGAAGAATGATTGACAGATTGAACTTCTTCACCCGCGGGCG TTCACGGGCGAATTAGAGGGTGGTTTATGTTGCGACTCGGCCGAGAGCCT AGGGGTCGGCCTTTCCACGGCACCGAATTCAAAAATGGTAGCGTAGTCGT GAATCTCAATTTAAATGAACACCACGTTGTTTATTTAAACTAATGCTGGA CGTTCAAAAGCTCTTAACAAAATTTCTTTTATTTGAAGGCAATTCTGTGA TTGTTTTTGTCTTATCTGGCAAATGAGGTTAGTAGGTTTTGAAATCGAGC ATTTTATCATGTTGTCATTTTGTTAGTCAGTGATGACTGCTCTCCTGGAA GTTTTACAAGATGAACTAGGTAGGTTTGATCGCCACCAGAATAGTTTCAA TTTGACCCTGGAATGGCTATTTTAGGGCCCGTTTACATGGATTTTCGGTA CTGTGTGAGATCTAGACCGTTCTGAGTCTCTGTCTTGTTTACATGAGTGT CTCAGTACGGGCTGGATTTTCAATTTCGGTTTGGGGTTGTCATAGTACTT TTAGCGGGCCGAATGATTACCACAGACTTCAAAAATGAAAATCTATCCTG TCGTTTAGAAAGCTCTAGAAAAAGCTGCTCCAGTAATTTTTTTTTGAGTT CTGTGATAATCAACCCTATAAAAAATGCTACGACCACCCCGAACTGAAAT CTTTTAGCGTTTACATGGATCTTCTGGACTGTACTGAAATTTCGGTATGG TGATTTTGACCGTTCCGAAAGTTTGGGCGTGCTGAAATCTCAGACCGGTC TGGCATATAAACGATATGAGACTTCAGATTGTAGACCGTACCGAAAAAAT CTCAGTATATGCCCGTACCGAAAATCCATGTAAACGGGCCCTTAGACTCA ACTGGCAAACCTTGTTTTTACCCCAAAAACTAGTACGAAAGTAAAAAAGC AATGCTAATAGTCATTGTATGATTGCTTTCAATCTTTCCTAGCATCAATA ATTAAAAATTCAATTACTCAAATTAAAATATTTATTGAAAAAACTCTGAA TGACACTTTTTCATGCGAAAAGCTACTTTCACTTTCCCAGACCCAATCAA TCGAATTTGTCGAACCATCGAACTAATCGAACTTCATCGAACGATTAAAG TTTAAAGATTAAAGATTAAATTTCCATTTTTTTTCAAATATTGTACGTGT TCGATTAAGTTCGATCACTAATTTTGGTATGATTAGTTTGACAACCTAAT TTGTTCGATTAGTTCGCACCATTAAATGTTCAATTTTAAAGTAAAAATCG GATTGTAAAATCGGGAAAGCTACTCCCAATATCGGAAACATTTTTCCCAA ACCAGTGCTAACATTGCGTCAGCAACTCGCACCCGGTCGTGTGTTAGCAG TCGTGTGGACTAAATATTGTCGGGTCGGTAAACTGAATATCCAGGAGACT ATTTTCAGCCTCGAGTTCCTTATAAACGTGTTCCTTATAAAAAAAAAACG TGTACCCTGGATATCCAAGTTCTGACAAAGTTTTGAAATTCAGAAGTCTA GAAGTCTAAAAACCCAGGGTCGACAAATCTTCAGCTGCGTGCAATCATTT TTTTAATAGGGCACATGTGCTGCATTCAAAATTTTGAACATCAAATTGAG TTAGGTGAACCAGTCAGTGAACACATATTATATACACAATGATATTTTAT ATATGCACCTTCACTTTGCTAATATCCAATTGTATGCAATGCAAAAGTAT TGGGTTCAGTGTTGAACTATTTTTTGTACAACAGACTGCTTAAATCGTAA TTTTTATGTTCGGTTGAAAAATTTTACGTTTTCTATACCGGCAATGAAAA AGTTTGTGTAATTTACGATGCGCGATCCAACCATTCACAATGCAGGATGC ACGATCCATGCATTATCTATGTTAATTATTCTAATTATGCATGAATAAAT TTTTATAAATAGCTACAAACATCATACAACAATACCGGCAAAGAAACAAA AAAGAGAGGAAAAAGATTCATCATTAAATTAGAATGATTAACATAACTTA TATGATAGCAAGAGAAAGAAAACGTTTGCTAATGTTGCATCACTCGCTTA ATTGAAAGAAACTGCTTTGACGTCATACAAAAGTTTTGACGCAAGTAAAT TATTAAAAGACAAACTCATCTTAGCCTACTTTGTGTATACAGTAGTTTTT CTCTTTTTCTCTCCTCTTGGGTAAAACATGGTTGCAAAGAATTTACAATT CATTTGTAAGAAAACAAGAGAGCCATTCGTTGAACATTTTTTGCTGCACA GTGGACCGCTAAAATTGTAATTTTTATGTTTTTGGTAGAAAACTCATGTT TTTAACAGCTTTAATTTTTACGGTAGTTATACCTTTACATTATAAATACT ACATCATTTTATAATATTCCATAGCCAGGGGGGGGTCGGTAGTAAAATCT CAGACATAATGACGTTTACTACGGTGGTGGTGTGACGAAAAATCGAAAAA AAATTTTACTACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNAATCAGTCCGAAAAGCAACTAAAAAATAGGTGGTCTC TATGACAAATTGTCCCAAAAGCTTTTACTACCAGGGTAGTAAAATACCTC TTCCGACAAGAGTCTGGGTGGTGGTATGTAAAAATTCGTAAAAATCCTTT TACTACTCATATATGTCTGAGATTTTACTACCGACCCCCCCCTGCCATAG CACATGAAGTATTGAGTTGAGTGTTGAAGCATCTTTGGCATAGCTGGTCC CTTGACTTTTAATTTTTATGTTTGGCATGTATCAGGGTATCGTGTTAAGT TTTTTGAAATGATACTTTTCAAAGACAGTCTGTAAAAGCTTGACTTTGAC TTCAACCCGGACCCAAGAAAAAGTCGACCCTTTTACAGACCGTCCTTTTC GAAGGTTTTTTTTAATGACTGTCTATAAATTTTATAACAAAAGCAAGGTT GTATTTTTTGGCTCTCTCAAGAGACCTGTCATAACTTGACTCATTTTATT TAGGCAGAAATATGATCTTCTCAAAACCAATCGACAGAGTGGTAAATTTT TGTGGGGCTCAAATCATAGCATGTCTGTTGATCTTAGCAGCGTGCAGCGT GCATTGGGCAGATTTTTATTTTGATGGGCATTATTACAAAATTGGGTTAT GGAAAGTTTGTACTGTAAAGGCAGACGAATGCAACTCCTTTGACATGTGG CTTGAAGAAGACGAGAAACTCCCGAGTTGGTTAAGCCAAATCCGCATATT GATTTGCTTCGCAACAGTATCAGCAGTAGTTGGTCTTCTAACGTCCTTGA TGGGGATTTTCTATTGGAAAATCAAATGCGTTTACACTTCACTTCTACAC TTTATATCTACCGGACTTCTGGTTGGAGTGTGTTTCATTTTTTACAAAAA TAACCACTTCGGGCAATATGTAAAAGTGAAAAATCTCTCATCGTTTTATG TAGCAATGATCACAGCTGCATTGACTTTTTTACTTGCAGTCTTTGGAATA ATGGCTGATTTTTGTAGTAGCTGTTGAGTTAGCCAATTTTTTTTTTATAA ACTTTTGTTTTACTGGTACGTGCAGCGTGCATTGGGCAGATTTTTATTTT GATGGGCATTATTACAAAATTGGCTTATGGAAAGTTTGTCCTGTAAAGGC AGACGAATGCAACTCCTTTGACATGTGGCTTGAAGAAGACGAGAAACTCC CGAGTTGGTTAATCCAAATCCGCATATTGATTTGCTTCACAACAGTATCA GCAGTAGTTGGTCTTCTAACATCCTTGATGGGGATTTTCTATTAGAAAAT CAAATGCGTTTACACTTCACTTCTACACTTTATATCTACCGAACTTCTGG TTGGAGTGTGTTTCATTTTTTACAAAAATAACCACTTCGGGCAATATGTA AAAGTGAAAAATCTCTCATCGTTTTATGTAGCAATGATCACAGCTGCATT GACTTTTTTACTTGCAGTCTTTGGAATAATGGCTGATTTTTGTAGTAGCT GTTGAGTTAGCCAATTTTTTTTTGTTATAAACTTTTGTTTTACTGGTAGT TAGGCTGATGATATTAACATACCAGTTTAGCGTCAGCCGCCTGCATGTCT TGAAAGTGCCTACAAGAAAATTTCATTATTTAAAAAATTTTCATTATTCT ATATTTCTTCACAACATACAACCTCCATCTTCGTTAATATCAGTTATCTC AATGCATGACCCTTTTCCAGGGGTAAACATGGGCATAAACAAAGAATTCT ACAACTGCAATGTCTGGCAGTGTGAATCCCGCCCATCTATCCAGATTTCT TCAGGCAGTTTTGCACACCTTTGTTTTTTGTTCGGGAGGTAAATAAACCT ATTTTTGCTTTAGTTTGCTTAGAGAAAGGTAGTTTTTCGGATTTTTCTCA GCTTCTGTCGTATAGAATTTTAAATCTCTAGCATGTTCTTACTTTCCATG ATACAAGAGCACACAGAAAATTTCATTTCAAACAAAACTGGGCATCAAAA GTTATAAACCAAAAGCTGACTTTTCCTAAGCAAACTCAGCTTAAACGGGA TTTTTACCTCCCAAAATTTTTATACACAATTTGGTGGAGTGCGGACCTTT CCGAGTGAAATTTTGATTACGGGAATGGTGTTTTTGCCATATCTAGCACC ACTGCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047346TCONS_00047346Clytia hemisphaericatranscript
TCONS_00047345TCONS_00047345Clytia hemisphaericatranscript
TCONS_00047344TCONS_00047344Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047344-proteinTCONS_00047344-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:49770..56176 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.28 0.64 0.2 3.67 3.31 4.93 7.51 3.82 2.51 4.61 3.04 3.23 5.18 0.67 0.79 1.26 0.29 1.15 0.42 0.72 0.03 0.23 0.05 0.12 2.32 0.03 0.27 0.53 0.45