XLOC_029853 (gene) - C. hemisphaerica

Overview
NameXLOC_029853
Unique NameXLOC_029853
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:426508..431345+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029853 ID=XLOC_029853|Name=XLOC_029853|organism=Clytia hemisphaerica|type=gene|length=4838bp|location=Sequence derived from alignment at scaffold_117:426508..431345+ (Clytia hemisphaerica)
GCAATAAAttataagataaaaaaaattaaaatcaatcgCAAGAAAATGCC AGCCAAAAAAGAGGTATGCCTTTTGCTTATACTACATTATTTAATATTTA TTATAATATTTGTTTTACACCTATTACAAAGTTAGAATGCCTTTACTTTT TTAGAAAGCAAAGGTAAATCTTTTAAtgattcaaatatattttaaggTTA CAGAATCAATAACTTCTGTATTTATCTTTAGAAATGTCAAAATGAAGATT GCTCGCGACTTTTGTCAGTCAACCAAGTGGTTTGTCCTGGCTGCAATTTG AAACAGAAAAAGGAGAAGAAGAAACTTGCAATGGAGTACACAGTACGAAA AAAAGGTCAGATTATAGTAGATGTTGACGTGCATCCAAACTAGTACTTAT TAAGGAGTAAAAATTCAAGTTTTTGAGAGATCGTGATGTTTTCATAACCA TTTTGGGCCAATTTGTAATTTAAATCACAATCACGTGACTTCTAAACATG ACCTGTAGATTGACTGTGATAAGAAGATAACTAAAAACCGTCCTAATTTG CAACACTTTATTTCCTTTTCTTTCCATTTtatattcttttcaattttagt tACAAAAACCACAATAagtttattctattttttttgattgattgtAATGC CTACTGTTATTAATACTTTCTGCCATAGTAAAGTCAATATTATTTCATAA GTTGTATTTAATTCCTTCACAACGGAGTCAGGACTGAACTTGAAACGCAA AGCATAGAGCTGAATGACGAATTGGTTTAATAGcggactgactgactgac tgattgactgactgactgactgactgactgactgactgactgactgactg actgactgactgactgactgactgactgactgactgactgactgactgac tgactggaGTAACCCCTGGAGtttcttattttattattttcatcgtGAAT TGTGGTATTTATTGTTGAAAGTTAGgtctgatttcaaaatttttatatgt TGTTTAACATACAGATTTCTTTCCGCCCGCCTTTTAGCCACTAGATGATT TTTTATTACCAAATTGAACCATAATATAACATAATTTATCGTTTAAAGTT TATTAGAATTGATTAGTTGATACAGGTTGATAAATTATTGGTTGCTTATA TTTCTAGAAATGTCAAAATGAAGATTGTAGTGGACTTCTCTTTTGCAACC AGATGACGTGTCCTGAATGTGGAGTGAAGCAGAAAAAGGTGGGCAAAACA GCCATAGATTATAAACCTCTGGGGAAGACATGTCTTACGACGGAGAAGTA CAGAATTCATGGCAGGGTAAGAAGAGACTTccgttttaatgaaattttaa tgaaatcgGGCAACTTTCGTTTTAGCCTGTCCCACATTGAACCATGTAGA TATTCAATAAAACCCTAAAGGCTGTACTCAACCTCGGTCCAGCCAAATCT TCGACGgcttttttttggattttagtcCCCAATGAATGGATAAACTTAAA AGATTCGTTTGACGTCAAATTGCAAAGACTGCAGGCACAGATTTACTTAG ATACAGTATTTTATTTGGTAGGATTTTCTACCAAGGAACAATAGAAGTTC ACGTAATTAACCCAATGAGAAGCGTCGCGATATTcacctttttttgcttg gaaaagcttaacCCTATTAGGGGGTGTTTTACACCACGCACGTGCTTTTT CCCTAATAACTCctggaaaactttttgaaacacccTGAAATTTTCTGACA ATTGActaatataccgggtgcgccacaaaaaagtttctctctttgaaact aattttctcgaaatctaaaaattttaaaagaaccattatttttccattgg aaagaagaaagataaagttaagttttgatgggtcatttattgaattcgat tcattagatcaaaagttatgctcaattgaataaaaaagtctttttcagaa agtgctcgaaaacgttaaaaatcgaccccCCACTGCATCAGATTTCATGA CTTTTATTTATAACATCGGTCATAAACTCCaactaaaatcctttaaaact taaaaatcttaaaatgctCATAACTACTTGAATACTTatcaaaattaatt aaattttcacaaattttcacaaattttaggTATCAAAAgaggaaattgaa aaaaacaaaaaaaattcaaaaatatttagacgtcattttctatgacgtca taaattttaatcatttttactCTTATTAAGCATTAATTTTAAGGATTAAA ATCTTATGGTATATTAACAACcagcaaatatgttaaagagtATCCTTTTG GCTTTCAGTTTCAATTGATCTTTTTGTAAGTGTCATTTTTTCCCTAAATC GCCAACAGGTGCCAAATTGGTGATGAAATCTAAGGTTGTCCTTGACAATT TAATAAAGACTAAAGAGTGGAATCGGTATTTATTTTCTTAGCTTATGGGT TTAGAAGAACAACACCACCATCATGGATTTGTTGTTGATCTGTCANTTTA TTTTCTTAGCTTATGGGCTTAGAAGAACAACACCACCATCATGGATTTGT TGTTTATCTGTCCAAAAATGGAAACGGACATTCAATCGACCACAACGAGG AGGGCGCATTCTTTTCGTGGTTCTTGAAAGAGGACAACGAAGGAAAAAAA TTCCTTCCTTACCTAAAGGATCGTTTCGTTGAGTGTGAgttatttttatt attcttaTTATTATATAGATGTACAGTTTCAGGCACACTTTTGGCTTCTC GAACCGATTCTAATCTTACACAACTTTGTTGTCAGCATGTTCTCGGCTCT TCGACGTTTATTGATGGTGCCATCTAAGATAAGCACCATTGAAATTACCA ATAATACCGGGAACGAGGGAAACTCCACAATATGTTCAGGGCTCCTGGTA TAAGTGAATTTTTATAATTCGATATGCACATAATTTGCTCCAAACCCGCT AAATTAAGTCTCGACCAACTCtaaatattttcatgaattGTCCGATTTTT ATAATCTAGGCTCGAAAGTACACCTTTTTTAATATATTCACCCTAATTAC CTAGTTTCAACCTAAACATCTTTTATTCGCGAAAATGTTACTTCTCATCC AAATTAAATCCTGCCTGTTGGTAAGGGGCTAAATCTTAGGATCCTTGACA TCTTTTTTGCGATACAACCAAACCTGGTTCAATTCAAAGAAtaataattt gatgaaaattcgaaGTTGATTGGCTCTCTACTGTACTAATTTAATgtgat taattttcgcgtggattaaatttcgcggattatagcctcatccgcgaaat ttaatcctagTGAAGCTTTGAAAAGAGGCCTTCCGTGAAAATTTATCcat gcaaaaatttaaaaaaatcttcagatcCGCTATTAAGTTATTCTATAAGT GAAATTTAAACCTTCACTCCCCTGACTAGCTAAACAATTGAGACTTTTCA ATGATTGAATTGCTTTTTAGgacaaaaactatttttagaACTTAGTTCGT TACTGTTCAAAAATAATTAAGTCAAAGGAAACACAAAAATAAGCCCccgc aaaaaaattgaaaactcgTCAACCGCGAAACTTAacccccgcgaaaattt atcccattaaagtatgcaCGGTATTATACGATATATTTTACTTGAATTTT CAGGGTCCAAATCTCGACAAGCGAACGAACAAAGCCGCAGCGACGAACAG AACACAGAAAACACCAACGGACAAAGCCGCAACGACGAACAGGACATAGA AAACACCAACGGACAAAACGGCAACGACGAACAGGACATAGAAAACACCA ACAGACAAAACGGCAACGACGAACTGGACATAGAAAACACCAACGGACAA AACGGCAACGACGAACAGGACATAGAAAACACCAACGGACAAAACGGCAA CGACGAACAGGACATAGAAAACACCAACGGACAAAACGGCAACGACGAAC AGGACATAGAAAACACCAACGGACAAAACGGCAACGACGAACAGGACATA GAAAACACCAACGGACAAAACGGCAACGACGAACAGGACATTGAAAACAC CAACGTACAAAACGGCAACGACGAACTGGACATAGAAAACACCAACGGAC AAAACGGCAACGACGAACAGGACATAGAAAACACCAACGGACAAAGCGGC AACGACGAACAGAACATTGAAAACACCAACGGACAAAACGGCAACGACGA ACAGGACATAGAAAACACCAACGGACAAAGCGGCAACGACGAACAGGACA TAGAAAACACCAACGGACAAAGCGGCATCGGCGAACAGAACATAGAAAac accaaaagaaaaaaaaagaagtaccCTAAGagagagaagaaaaaacataa GTATGTGACCGGGTTGGAGAAAGTTGAGGTAGAGGTGGAGCTGGAGGCTT CCATTTGTGATCGGAAGTCTCTTGTTGGTAAGTGCGTAGGTCTCCACACC GAAAACCCAAATGAATATTGGGTTTTCGGTGTGGAGAAAGTATCTACAAG GGGTGTTTGTGGTAGTTTTTATGATTGCTTCGATAAAGAAAATAGGCTTT ATCAACATCATAGTGACAACAACGACAGCTTCTATGCGAATATCATTAGA AGGGGAGAAGAGCataatgacttcttttttttttatcttgagAAGTCTGA GGAGGGTTACCAAGTGCCTTATACTGACCATCTTGTCTTGATGGCCAGAC TCGAGGAGTTTGCTCAGTCCTCTCTTTGAGAACGAAATAAGaaggtaaac aaaaaattttcccattttggaaatcaagtaaaaaagttttattcGAGAAA ACAACCTATCGTTATGTGGTAGAATTGCTTGCACGTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046782TCONS_00046782Clytia hemisphaericatranscript
TCONS_00046783TCONS_00046783Clytia hemisphaericatranscript
TCONS_00046784TCONS_00046784Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046783-proteinTCONS_00046783-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:426508..431345 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.05 0.03 0.12 7.07 5.73 5 5.71 1.9 1.52 4.33 3.4 3.35 3.21 0.05 0.07 0.32 0.19 0.06 0.06 0.34 0.11 0.03 0.06 14.4 8.97 0.07 0.08 0.33 0.03