XLOC_029803 (gene) - C. hemisphaerica

Overview
NameXLOC_029803
Unique NameXLOC_029803
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_116:600262..607972-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029803 ID=XLOC_029803|Name=XLOC_029803|organism=Clytia hemisphaerica|type=gene|length=7711bp|location=Sequence derived from alignment at scaffold_116:600262..607972- (Clytia hemisphaerica)
TACGAAATAGAATAAAAACAAATATGGTAGCATCGAAATCGAAAGTACTT TCTAGCATCAACACATCAACCTGCATCAACACACAAAACCAGATGATGGC GCATTTAGACTCTGTTGAGTTTGTTATTATATCAATTGGAAGCAACAATT CAGCTCTAAAGGACATATTAAAAGGTGAATTTTATCAGCATATTGGTGTA AAGTAGTAGAAACATTGAAAAATATTGACTTCAAACATAGGTAGCGTCTG AGACAACTCTGATGCTGCAATATATTAAAATTTCCTCAGACCTCACTTCG CGCGCGCCCTCCTTTAAACAACCTTACTGGCCAACGCACCGGGAAGTCCA GTGTGTTTGTCCGTGCCAAAATCCCTCAGCCAGACGGGAACCTTTTGTCT GGTGTTATGTTAATTTTTTGAACTTCTTGACACCGGAGACAAAGTTTGTT TAAAAACAATAATGTGCACCGGGCCAGTCTTGAAAGAAGAGAATATTTAC GCCAGAGATTTCTTGGCGTAGCCTTTGTTTAAGCCTATGAAATCCAAAGT CTGTGCCAGAGATATCCGGCATACATGCCTTATTTTCCAGATTGGGCACC GGGCGGACGCACTGGTTGAGATAGATTGTCTGGTGTTAAAAAGTTTTACT TGAGATTTGTTCTTTTCTAAAGAAGAGATTTTTTTTTTTTAATCTGAAAA TAATTTGAATGTCATTAATCATTAAACATTAAAAAAGATGAAAAAAAAAG AAGAGTAAGAGCAGAAATTATGCAATAGACCGCTGTGTTTGCCTAAAGGA GTATTATTTCTATGTTAAGTTTTCCTGTCTTTTAAAGCTTCAGCATGATA AAAAATGTGCCCAAGACCACCTATGTCTAATATTTGCCAAAAATTGGTCT TTTTCTTATCTACAGTATGTCACTGCTCAAAAGACCAATTTTTGGTAGAT ATTGGACATAAGATAATAAGACAGAATATAAACCCTAAACAGACAAAACT CTGATCCTTTCAAACAAAATTTGGTCTTCTCAGATGCAAAGTTTCAATTT TTATCCAAACCCTGCCAAAACAGATTCAACTTTCAATATCTAGTAAATCC CTGCAGATTTTTTTACATTTTGAAAAAGTGACTCTATAGTGGCACATCCT ATACAAAATTTTGTCCGAGGGGACGGACATGGCAGCTCTCAATATCACAG TAAATTAAAAAAACCTAAACTAAATTGAAATTTATAACAAAAATGGCCTG TGAGGTAATTGATGATCAAGGATAATTTGAAATTTTTCTACTAACAGTAA ACAAGTAATTAACTTTAAACAATAAATCTCAACAAATAATATAAATACAG ATAAGACATACCATTTATCAGTAGAAGGTTCTCCTTCATTGATTAATCAT GTCAAGAAAATATAGTAAAGCATTTTAAAGAGAAGACTTGAGCACTTTGC TCCAAAACCTACTTACAAGTAATACAATTAAGTAGCAGGCAACCTAACTG GCAAAAGTGAAGTTATATCATAGTATGTTGTTTGATGCTGATTCTTGTAA TATATTTGCATAAGACAATGAAGCCTAATCTCGCAAATTCTACATAAAAA TTACGAAAATGAAAAAGTTTTAAATGTGCTGTCAGCAATTAATAGGTTAA AACATCTTGTCAAGTAAAACCAAAAGTATTAGATTAAAATATGAGTTAGA AATGTATAAAAAATTTGTTTGTTAAAATCTAGTATAAAATATAAATAAGC TAAGATACAAAATGATGTTTAATGTCAAAATTTAACCTTAATCTTTATAT TTCAATTCAACTTTAGAACTTGATCCTCATGATGAAATTGAAAGCAACAC TTCATATACTTGGCACTTAAAAAACAAATATTTCAAGGCTGACGTCAACA TTTATTGCTGTAGTAGAGAAGAGTTTTTGAAAAACTTTTTAGAATTTCGA AAATTGGAGGCTGTATTATTCACTTTTGATGCTGCATCTGTAAGTATGCA ACTCTTTATTTATTCTAAAAGTTTTTTCTTCATCCATACACTTATTGGTA TAAAATAAAGGCTCAAAAGTAATCATAAATAGTAAATCTATCTGAATCTA TCTATATATTTTAAAGTATTAAAAAGCTGTCCTAAGACCCATTATCTATA CATACAAATAAGAAGATTTTAAGAAAATAAAAAAGTGTATAAAATTTTAG CAATTCCAATAAGAGTGACACAAAGAAATTAGCTCTGGATCTTTATCATT GTGTATAAAAATTAATCATAAAATTATTATTTTAAGCCTGTGCTGTTTTA GCCTGTTCTTCAAGAAAAAAAAATGTTCTTTTTTTAGATTTTAAGCCCTA GAATTGATAAATTATCTTATTTTGTTTCATTTTCATCATAAGAGTGATTC GTTTTGTGAAATTGAAAAAACATCACACCTTTTCAAAGAAGATGAGAGCC CAGAGCTTCGGATGGTCTGGGAAACAAGCAATAAAAGATTGGAAGGTAAA TACTCTGATCTCCATTTTGACAACCCTGTTGCTAATTTTGTTTTTTAATT TTCTGCCCCGGACATTTTTCAATATTTTGATCTTTAGCACTTTAAAGTAT TTTTCATTTTTTTAAATACAAAGTGCCTTAAAAAGGGTTTGAGACGTTTG ACTAAGCACAAATATCTTATATAAGACACTAGAGCTCTNGGATTAGAAGG TAAATACTCTGATCTCCATTTTGACAACCCTGTTGCTAATTTTGTTTTTT AATTTTCTGCCCCGGACATTTTTCAATATTTTGATCTTTAGCACTTTAAA GTATTTTTCATTTTTTTAAATACAAAGTGCCTTAAAAAGGGTTTGAGACG TTTGACTAAGCACAAATATCTTATATAAGACACTAGAGCTCTTGCTTCCT TATCTTGAATGAAGGGACGTCACAATTTAGCTTGCGCCTGCTTGAGGGAG CCTTGAAATATTGATGTCATTGCAGTGTCAAAAAAACTTTAACAGTCAAG GTTTCTACTGTGGTCTGCTATTAGCAAAGATGGCGGATTATTTAGCTTTA TTCTGTCTTGCTTTGGGAGGATAGGGTGGCTCTATCTAGTGTTTCATATA AGATATCTGTGGGTTGAAGGGATGGGGTTGTTCTGCTGCTTCCATATGGA TACAAAACAAACAATAGAGAGAAATTTATTTTAAAATAAAAAAACATTAG TACAAAATGCTACCTAACAGTCCATGTTCCAAGCACTACAAATTTGGTTT TTCAATGTGAACACGGATTTTATTATTTACTTGACTAAAATTCTAAACTT TTGGGAACTGAAATGTACTTTAAGTTATATTTATTTCTTTTGTTTTTGTT TAGATGCAACAAAGGATAAATATTTTTCATGGTGTTTGGATCACCAATTC GAGCTGATCGAAAATATGGAGACTGGAGAAGAGGCAGATGAAGGTATAGA ATTTATCATATTCCTTTTTCATTCAATTTTTAAGAATCGATATGATTCCT AAAAACGAAAAGTACCCTTTTTTAACCTTCGAAACTGAAAATATTTTAAG TTTTTTTACCATCTCAAAAAAGTTCCATAATCCTATCTACTTTCGAACCA ATCACATGCGGTTGAATCCTACGAAAGATGCTACGGATCATAAGGGTTGG CCCATCCTGTATGGCATGAAACTTTGAGTATGAAATTAACTTATTCAAAC TAGTAAAAAACAGATTGCAAATGTGTTTAGCCTTCTTTATACATTCGACA TTGTATTCAATTTTCTGCAAGACTCGTGAGTGGATAGTGTAGAAATCTAA GCTAGTAGACTCACGCACTAGGATAAATCTGATGGTAAGTTGTGACAAGT TGTATTATAATTTTGTCGGAAAAGTGATTGAAAACGAGGACCGTAACGAT GTTGCTTATTCCAATAAGAGTGTTCTTAACGTAGTAGTCCCATTTTATGA GAATTTGAGGCCGCAGCATGAAGGTAGAGCATCCAGCTACGGTGTGCAAG ATTGTGGGTTCGATCGCCAGCAAATGTCCAAAACAAACTTGTAAAACAAT TGAAATAATCAAAATCAGCCATATTTGTTTTTATTTTTTATTTTGACATT TGACATTTGTTTTGATTTTGTATCCCGCTGCAAATGGTTTGTTTACAAAT TTCGTCAGTACTTTTATGTCCCTTTAAGCCTGACTATTCGATCGATGATC AATGTAGAGCCACGATTTATTAGTTCTCAGAGAACAAAAAATATGATTTG TAATTCTTTTTTTTTTTCAGATAGTTTTGGTGTGAAGTATGGCGTGGACA GGATAAAAGAAGCCTTGCGTTCACATATGTGGGCCAACCATCAGATGATA GGTTCGTTGTAGTACAGACTTCGTACTTAGTACAAAATGGCACTTAATGC CTCTCAGCTTGATGCTTAGCAATTAAGAGAAAGGATCAAGGGGAAAGTCG AGCAATCCAGGGAGAAAGAGTGTCCCCTTCTCCTACCTTCAGGTAGATAG CTATCGAAAGGGGAGCCCTCGGTTCGCCTCCGACTGCGGTCACAGACTTA CTTAATTATCAGATGCCTAACAATTACTTTATTCAATCTCATTAGTCTTA CTGAAATTCCAAAAAATTTTAAAAGCCCATTTTTTACCTTAATTTATTTT TCGAGTTTTTCAAGCATAGTTACACCCCTTGTTTCAACTATCCAATTCGC TTTTAAATGTACACTTTTTCTCGCTATCATGTGAAAACCACGTCGGCGTT AGTAGAGTAATTCCCTTTAGAGTGGTTTCTATATTGTAGTAAGAAAGAGT ACACATGTTTTCTTTATTATAAACATATTTAAAGCACTTATAAGCATATA TCTAGGCTCGGATATGGCAGAAATTTAAGCATATGATAAGCATTACCTTG AGCCTATGAAAAATGTATTTTCCTGTTTTTGGCTGGGATTTTACAGATTT TCGGAATTTCTCTAAGATTTTGCTTGGGATATAATAATCCATATAAGCTT TTTTCAGCCTTGTCAAGCCCTCGACCTAAGCATCTCCGAGCCTGTTTTCA AATTTTTGCATGCTTATAAAAATAACATGTACACTCAAAGTGAAACTTTA TGAATTTTTTTCTCATTCTTCACGTTTTCTTTTATTAATTAAGAGCCAGA TGAAAAACCGAAAAAACCTTCAACAACAACAGTGCATAACGAACAACAAA CAATGACAGAACAGAACGAAGATCTTTTTCACGATAATGAATCATTCGAA GATCTTTTCAACAAATTACACGTTATGAAAGGTAAAAACCAAACCTCGGC CTAGCGAACACCTTACAAAAAACTGGGATTTTTCATCCCGTTTCTTAGTG AGTTCCACTTTGACGATTTTCGAAAAATAGAAGCCTTTCAAGTGCTTTGA AGCAAATTCGATTTCTTTGCTACTGCAAGAGCTTCGATTATTATATTGAC GTCAAAAAGTCGAATGTTTGGAGCCCGAAAACCTGGGCTCAAAACATTCG AAAAAGTCGCAAAGTGGAATAGACGTTAATTGCGTAAAAAACGCGGGTCG CGTCTAATATAGGCTAACCTCGGCCTTTCCTAATACTAATTTCGTTTCGC AGTGCTGCAACTCCGTAGACAGCTGGATTTTATAGCATGAATTTCCGTGC CAAACGAGCCTTTTCGAAAGCCTGTACCAGAAATTTGGATTTAAATTTTA GATCTTCCGCACAGATTCACCAAAGTCGGTTGCAATACTGATATAAAGAA ATTTCCTACTTTAATCATTACTAAAAAATACTTGATTCCAAGCTACTTTA CACAGACTCTAGGTCTAGACAGTCGTCTTTCTGTCTTGCCTTCCGATTTT TTTAAAAAAGTCGGCGAAGAGACAAGCTTTTAAAGTCAATGCAATGCCTT TTACGACCTCAATATTTTGACTGTCTTCACTTCAATCTTTTTGAAAGAAA AATTTGAAACTGCCTCATTCTCAAATCGTATCGTGGGCAGAAAGTGGACC GTTTCAATTTGGTCTAACTTTGAAATATAAGGAAGACCATGTGTTTTGTA TTGTGTTTTTAGAGCAAGCACAAAACCTCGATGGAGACGCACGGAAAGAT TATGCTGAAAAAGTAGCGTACGCTTTCATGGAAGCACTTGGTATTGATGA TGGAGAAAGTGATTCTGAAGATAGGTAATCAATTGAGTAATAAGCTCATT TATTGAAAATGGGAGGAATTATACTCTCCACTTGTACGCGTTTCGATCGC ACTTTTTCAAGCAAAGCTTCCAAGCTATTGGTTAAAAGAAAAATGAAGCA ACTGCGTTGGCGCGATCTGACGTAACGATTGAAAAAAGTTGATAAATGTG TCCAACTGATTTTTTCGAGCACGCGCTACATTTTTATGACGTAATCTTTT TTTTCAAGCAAAAAAAATATTAGCCAAAAAATGCGATCGCAGCGCGCGCA AGTGAAGGCCGGCCTTTAAACCGATATACTTTTTCGAGATTAATAACGTA CTGAAGCATGGGCAGATCATTTTGTGTGATGAAAGATGGATCTCAAAGGC TGCCAAAATTATTAAGTTATTCAAAGGGATTGGAACGGTGGCAAGATGCA TGAATTATGCTTTGATGATTACAAGAACATAATTTATATGAGAATATAAT GAAGTCGTGATGGAAATTCGTTGTTTAAACATATAACAGTATGTTGTATA GAATTGTATATTTACAGATAATATGTATGTATGTTATCCCCGGGGGGGGG GGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTTTTCCGACCCTTACAGTGCATTTTAAACATATTGGAAAAGGTA CCCTTAGGACCCGCACATACCCGTCGGTCCTTTTGCCCAGCTGCCCCCCG GGATGTTATCCCACTTTATCCCAAGTTTTTCATTGCCCATTTTTTCGCCT TTTTATGACTTACCTTAGACGTTTGTTTACAAAATAATTTATTTGGAAAA AAGAAATGGAGAAAAAATCCGTATAAAAGTTGGTATTTTTTCGAAAAATT AAAAAAAAACATTTGCTTGTTCATCATGAACTTATTCATGGCTTCATTGA TAATTCATGAGTAAGCGTAAGTCCCATTTGAAATTGGTCACTGCATGCCT GAGAAATAATCATTTTACCATATATGGTAGAATTAAGAACTTTTATATGT TATACTAAACGCTTTTTATAAGAACACAAGGTTTCGATGGCCAAAATATA GAACAAGTTAAGAACATTTTGAGGCTTTGTGAACTCTAAAACACCCAATT TCTTAGGAAAATGGACAAAAACTCACAAAATGGTGAAAATAAGAATAGTT TAAGAACAAATTGAGGTTTAAAACTCAAAAAGTTAAGAATATCCCAAGGC TTCAAAAACTTTTGATGTTCTTGTAAAAAAACGTGTAAAAATTAAAGAGC CTGTTATTCTGAGATAAAGTCATTGGAAATAATTTCATAAAAGCAAAAGC ATGACGTCAGGAAACCCTTTACATTTCACTATGACGTAATGATTGACGAT ACGCAATACGATCAAGCAATCTATTATAGCAATACGACTTTATCAAATTC TCATGCTGATATGACTTCGAGAAATAGAGACTCTGCCTGTTTAAGCTATG TTTTTATATTCTTTGATTTTAAGGTATAATTGACGCAATAATACGTCGGA TGGGTTTGAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046715TCONS_00046715Clytia hemisphaericatranscript
TCONS_00046714TCONS_00046714Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046714-proteinTCONS_00046714-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:600262..607972 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AAGABalpha- and gamma-adaptin-binding protein p34 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.16 37.07 23.24 15.83 31.3 23.12 36.31 31.84 26.48 24.07 25.31 26.19 11.51 13.44 16.23 17.73 24.16 21.02 12.07 12.57 25.24 21.22 28.47 28.74 25.09 30.02 16.4 12.53 17.16 18.45