XLOC_029681 (gene) - C. hemisphaerica

Overview
NameXLOC_029681
Unique NameXLOC_029681
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_113:3069..8546+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029681 ID=XLOC_029681|Name=XLOC_029681|organism=Clytia hemisphaerica|type=gene|length=5478bp|location=Sequence derived from alignment at scaffold_113:3069..8546+ (Clytia hemisphaerica)
TTTTAAACGATCGATAGATCTATAATGGCTTTGCAGGGCAAGGGCGCCAG GCTTCCCAGAGGAAGCCATCCTTGAGGATGGCTAACTGCCATCCCGCATA CCCGCAAGCACCTAGAGGTAGACCTTCatggaaacaaaaaataaaacacc TAACACCTGTAACATATTAAAACatagaaattaaaataaataccACATAA ATGGATACAAACTGGTCTGCTGGTCATGGATGGTCTGGTCTGGGTcacag aaaaattaaaattttatgaCGATAAAATCTCCGCCAGATAAATACTGGAA ATCCGCTATgacttttaagaaataaaagCCATAGCTCAAACCCACATCGA CCTCATTTCGCTTTCTCGCAATAAAAAACAAGATGTCTAACAAATGTAAG TAATAATGTTTATGATTTTTAATCTAGATTTATCGTACGAATCATACTAT TTGAAGCAGTGAGCTTAATGACTTTTCTTTCTATCGTTACTCGATAGGGG ATTAAATGCTTATTAATGTTCCATATTTCGGTGGATACTAGATAGAGCAA CATAACTCCAAGCAATATTTGTTTGTTTCAAAAATTGGTTTAGTTAGCAC TAATTGTGGTCGTAAATCACCCTTCACCTAGTTTGTAGATGGGGTTAGGA CAACATTAGCATGAAGAGTCTTAGATTATCACAAGACAGGCTTTACAAGA AACTTTCTGTCCATTACGGGACAGAGAGGGGCTGATACACCTTGCTGTCA TTTATGTGACAGAGAGAGGGCTGATACNCAACATTAGCATGAAGAGTCTT AGGTTATCACAAGACAGGCTTTACAAGAAACTTTCTGTCCATTACGGGAC AGAGAGGGGCTGATACACCTTGCTGTCATTTATGTGACAGAGAGANGAAG GTTCTATATAGTAGTATATAATCATAAAGAACTTTGCTGTCATTACAGGA CGGAGAGATTCTATATAGTATATAATCATAAAGAACCTTGCTGCCATTAT GTGACAGAGAGATTCTTTATAGTAGTATATAATCATAAAGGACTGATACA ATAGCATTTCAGANTATATAGtatatcatcataaagaacTTTGCTGTCAT TACGTGACAGAGAGATTCTATATAGTATATAATCATAAAGAACTTTGTTG TCATTACGTGACAGGGAGATTCTATATTGTATATATATTCATAAAGAACT TTGCTGCCATTACGTGACAGAGAGATTCTATATAGCATATCATCATAAAG AACTTTGCTGTCATTATGTGACGAAGATTCTATATAAtatatcatcataa agaacTTTGCTGCCATTAGCATTACGTGACAGAGAGATTCTATATAGTAT ATAATCATAAAGAACTTTGCTGTCATTACATGACAGAGAAGGTTCTATAT AGTAGTATATAATCATAAAGAACTTTGCTGTCATTACAGGACGGAGAGAT TCTATATAGTATATAATCATAAAGAACCTTGCTGCCATTATGTGACAGAG AGATTCTTTATAGTAGTATATAATCATAAAGGACTGATACAATAGCATTT CAGACTAGTGGTTTTCATTTTACTACTTATAAAAACCTTGTTGCCATTAC ATGACAGAGAGAGGaatattgaatagtacttttgaTCAGTTCATAGTTTA AACTCTTCATCATTATAGATAAACTTGCTGTCGTTAAGTGACAGAGAGAG CTGATACGATTCTGTTTTCTGAGAGTTGAATTTATTTTACCATTATGAAG GACCTTTGTTGTCATTGAGTGAGAGAGGAACAAATCAAGAATATCCAGTA CTGTATAAGTTTAATTTATATTATCATGATAAAGACCCTGATGTCAATAT GACAGAGAGGGAGGGCNGGGATTCTATATAGCATATCATCATAAAGAACT TTGCTGTCATTATGTGACGAAGATTCTATGTAGtatatcatcataaagaa cTTTGCTGCCATTAGCATTACGTGACAGAGAGATTCTATATAGTATATAA TCATAAAGAACTTTGTTGTCATTACGTGACAGGGAGATTCCATATTGTAT ATATATTCATAAAGAACTTTGCTGCCATTACGTGACAGAGAGATTCTATA TAATATATCATCATAAAGAACTTTGCTGTCATTATGTGACGAAGATTCTA TATAATATATCATCATAAAGAACTTTGCTGCCATTAGCATTACGTGACAG AGAGATTCTATATAGTATATAATCATAAAGAACTTTGCTGTCATTACATG ACAGAGAAGGTTCTATATAGTAGTATATAATCATAAAGAACTTTGCTGTC ATTACAGGACGGAGAGATTCTATATAGTATATAATCATAAAGAACCTTGC TGCCATTATGTGACAGAGAGATTCTTTATAGTAGTATATAATCATAAAGG ACTGATACAATAGCATTTCAGACTAGTGGTTTTCATTTTACTACTTATAA AAACCTTGTTGCCATTACATGACAGAGAGAGGAATATTGAATAGTACTTT TGATCAGTTCATAGTTTAAACTCTTCATCATTATAGATAAACTTGCTGTC GTTAAGTGACAGAGAGAGCTGATACGATTCTGTTTTCTGAGAGTTGAATT TATTTTACCATTATGAAGGACCTTTGTTGTCATTGAGTGAGAGAGGAACA AATCAAGAATATCCAGTACTGTATAAGTTTAATTTATATTATCATGATAA AGACCCTGATGTCAATATGACAGAGAGGGAGGGCCGTTGCAGTACAATAT TTCAAATTACAGTTGTAGTTGAATGTCTTGTACCATTTGTATCATTATTA GGAGCCTCGCTGTCATTACATGATGAGGATTATACAGTAAAATGTCAATC TAGTTGAATTTCTTTACCTTGCTGTCAATATGTGACAGAGAGgaacaata caataaaaaatttctatatTAGTTGAATTAAGTTGAAGATCTTGCAGTAA TTACCTGACAGAGATTTTACATAAAAATTCCCaatcttgaatttcttttt atataaattaaaattaattttcttccaTATCAAATTGTTGGTGAAACACA AGATGGGGTGTAAAAATTTACTGATACAATCCTTTTCTGTTACAAAATAT AGAGGGACCGGATTTaatacaaaaatcttttcaacaaagtgaaattttct tcaCATATGATATGGTTTAAATACCATCCTTAAGTGTTAATCTGGCACTG TAGATATCTGTGTACTGCAGTTTCTGtccaaatccttaaaatttgggTTA CCTATGGCCCGGTAGATTTGTTTAAAATTACCTCTTCCTTTCTTGATAAG AATTGAGTCGAGAAATACTATTTGCAATACTCAGTATTTATTCAAGGATT TCTTTCTCCTTCGGTTGACGTTATTTGACATTTATTGCTTCTGTCGATGT CAAATAATTATCTTTCTCATTGCATGGGGGTGATATCAACATTCATTTAA ATTACCCTTCAATTGTCTGCCATTGCAGATGGTTTGAACTTAATACacaa aaaagattctttccCTTCCATATTTTTTGGGAAGACTACCAACATTAACT tttaattttaatgttttatttcaCATATTTTTTCTAGGCATTCTAAGGCC CAGTGAATACTGCTTCTGATGATACCAGTGTTTGATAACGATCTTCCAAC TAACAGAATGTTGTAAGTTTCACAGTTTATCATATGAATTTATGTTTGCA CCTTCAATAGACTGACGATTCTTTATTATATCTCAAGATGCGGCTTGAAG CTTTATTTTTCACACATACATGTCCATGGGATAGGTGGATTGTTTACTAT CAACATCAATACATCAACATCAATAGATGAGAATCACTGAGTTTTATTCA GTCATGTGATTAGATGTACTGACATAAAGCTTCTTTGATTATTTGTAGGT GAAGAGGATACCTTATACCAACCATTATAGCTGAAAGAAATATCCATATT AACTTTGACGGGAACAATGGAAGAACAAAGCAGATGCACTAGACAAGATA CTATTAGCTCTAAACCCAGATAATTGAGTGGGTCGAACACTTAGCTGCCA CCAATCACTGAGTAGTGTTGTAATGTTCACGAGAATAACTTGCTCCAGAA CTGTTGCTACATTCCTGTTTAGTAAATGGATAGTTAAAGGATTTCAGGTT AAAACCTTAAAGTCATATCCCGTACCTCCTGTATGGTTGAATACAAATTT GTTCATATGATTCAATTTTATGTCTCTCACTGATGGATAGGAGAGTTCAT ATATGGACCCTGAAAGTAGATTTTCTCCAAAATGAGTGTTACATGACTTT TATGAACATTTTCAGTCTGTTGATAATGCATTGCAACCAACGTAACTGTC ATTTATTTGGTACACTTTGAGTTGCGACTAATTAACATGATAAAGACTAA ACTCTATGTATGCAGCATTGAGGCTTCAACCAATAATATTGGATGGCTAT TCTTGTTTCCATAACGTGGATTTATCTTTAGTGATTCATTAAAGTTTTTG CATGTTTCATATTCaaaatatgtattttttctGAAGAAACATTTTTTCCA GAAATAATATATGCATTTCATTTCTTTCTTACTTTGAGATTTCTTATCTT ATAATGGGAGTCCTGTCCTGTCCCTCGATTGTTGCTAGATAGATTGATAA AGGACAGTCCTTGATAGCTAACTCTAGTTAGATGGTCTCTGGGttggaaa aagttttctttctaACTTCTGATCCAACACCTGTAAAAATTTGGCTGGAA TCCAGGTATTACCTAAGGCCTATAATTTCGACGTCATCTAACATTCCATT GGGCTGATCTCGTCGCCGATCTGAAGTACTTCGTAAGTTCTGTGTTAAAG ATGATTATTGTTACAAGACAGGCCCTAGTAGTATGTATACATACAGGTAT AGTACTTAGCGATGCATACCACTGATTTCACATTTATTCATGTACTAGAT ACTCTAATCGAGTTAGTAAATTTTGCCGTTGTAGCTTCCCACTAATATAG ACTCGAAAAATTCCGATGATACTTGCGTCTTCAATGACAGGACATGTTGT TTGATAGCAACAGCCTGTAGAATCTTCCCTGACTTTGCAAAGTCCAGGCA GATGGATTCATAGTAAACAATTTCCTATTCTCCTGTAGTCTTGTCTTGGT TCCCTGTTCCCTAGACTTCTTTTGACCTTTAAAGGCTACAAATTTGTTTT TCTTTGCAAATATTAAGTCGAATTGAAGTGCCCGAAGGGAGTCACTTGAA CAATTAGTATGGGAGTTTCGGCAACAAGGTCATTATTATTGTAAATAAGT ATTTGAGGTCTCAGATAGGAGGAGTTATCGGGTCAACTTAAAAAGTGTCG TGCGTGTCAATTTTGTGTGGAACAAGATGGTTATTCTACCTTGGGCTTTG AAGAGAGGTCGATGTGGGTTTGAGCTATGGCTTTTATTTCTTAAAAGTCA TAGCGGATTTCCAGTATTTATCTGGCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046497TCONS_00046497Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_113supercontigscaffold_113:3069..8546 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.3 0.07 0.15 15.64 11.11 6.84 7.65 5.13 4.8 3.34 3.52 2.46 2.48 1.17 1.33 1.58 1.53 1.7 2.51 3.19 2.67 1.97 2.47 1.06 1.99 7.56 5.3 4.36 3.14