XLOC_027702 (gene) - C. hemisphaerica

Overview
NameXLOC_027702
Unique NameXLOC_027702
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004888:295..5295+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027702 ID=XLOC_027702|Name=XLOC_027702|organism=Clytia hemisphaerica|type=gene|length=5001bp|location=Sequence derived from alignment at sc0004888:295..5295+ (Clytia hemisphaerica)
TTCAGACGAAGACATACACCAATGTGGGCGTTGCAAAGTAGTTTTCCATG ATGTCACAGCTTACTTGAAACACAAACAATCTAAAGCTTGTAAAACCATT AAAAGCAGTTCACCGAACAAACAACAAGCATCACCAACCAAAACACCTCA ACAGCAATACTCAAGCAGTGGAGATACTCAGCAATCACAAGTCCAACCTA TGGGAAACGAacaaataacaacaacaacccAGCAGCAACAGCAGCAAcag cagcagcagcagcagCAACAGCAgcagcaacaacaacagcagcagCATCA GCAGTCTCAATCCCAAacagaaaacaaccaaaacattCTAGAAGCTGCAG CCAAGAATACCATATTCCGTGATTCTTTCATCTCCATTAGAAACGAGATT CAAGATATTGGTACCGAGAAACGGGGAGTTGAGGAAAATGAACCTCAATA CACTTCTGAAGACTTATGGAGCAAAGAGAAAACTGGTGATGATATTTTGC TTTCCCAGGAAGACATTGTTGACGAAGCTGGTAAAAAAAGTAAGAGAAAT TTgactaactttttttgaaattctccATTTAATTAATATGTAGAGGGTTT AACTGTTGTTTATGTTCAATTGAATTTCAAGAGAAAATACTACACGGGGG GttggtagtaaaatctcagacataatgacgtttactacggtgatGGTGAA AcgaaaaatcgagaaaaaaaattactacccAGGgaagttaaatactaaaa tgggttgttaaatgttgaaaaaaatttactacctgggtagttaaaactgg taaaattagcaaattttagctatttttgtaattctttcaattttttggat gacttttctgaaNttgaaaaaaatttactacctgggtagttaaaactggt aaaattagcaaattttagctatttttgtaattctttcaattttttggatg acttttctgaataaatctgaaaattcttataatttgaaaaaattttctgt tggaaagttgtttgctgcaaacaaaaaattctggaaattttatgtcaata taaaaaagactttaattctaattCTAGTAAAatatgtgtcacagaaataa tcattttttagctttttttgtaaaatcggtCCGAAAAGTAACCAAAAAAT AGGAcggtggtctccatgacaaattgtcccaaaaacttttactaccctag ggtagtaaaatacctcttccaagagtctgggtggtggtatgtaaaaatcc ttttactattcatatatgtctgagattttactaccgaccccccttCCTGA ATACTATCTATCTATGGTCGTTGGGACTGGTATCACTTAAAGAATCTCTT CCGTCTGCCGGTTTATTTGGATGGAAGTTGttcattttataaaaattagt TTGGCAAATAGACCCTTTTTCAAAAAGGAAaacgtttttacaatttttac gaGGTTGACGAGATAATAACCAAACTTGGAAATAAAGATAGCTCCTTTAT CATCCTTATTaattattctttattttaaatGTCAGGGCGTGCCCGACAAC CCAAACCCTTTGATGAAAACGAAATCGGAACATCCGAACCAATGGATAGC CTCGATTCACCTCCAAAAGCCAAAAGGAAATCTAGACCGCCAAGGAGACA CAAGCCGCATTATGACCCGAGAGACGAAGCACGACATGAAGGGGCCGATG GAGCAGGTCCCAGTGGATTGCATTCTGCTTCTAGCTCTCTTCTTGAACTT ACAGGTACAAATTGTCAAGCGCATCCCGTTTTTCATTTTACTTTTGTAGA GAAGTTCAAACCTCTCCCACTTCACTTGAGAAACTGTTTACCAAAGTAAC CAAAAAAGTAACTAGTATATGCCTGTTCTTGCCATTTCTACCTTAAGGGA GATTAAAAATGAACCTTTGGATGTGACTAAGCCTCGGCGTCCCTCGGAAT GATAGTGACTTTTTGTTCAGCCTCCGAAAATCAAgtccttgaattttttc aagttcTTGGAATTTTGACTAAGTTTTGATATCTTTGctgaaattattga aaaatatagttCTAAAAACCTCAATCTCTCTACTAACGGTCGATATTTGA ATTTTTGCCCGTTCATATCCGTCATCTCGTTTATCTAGTACTACCTCCCA AGATTAGATAAGATATGCAGTATTGCAACTTATCTGTCCGTTGATGGAAA TCCATCCAGGGGAGCTTTTCATTAGAATTTTTGTCTCAATTGTAAGCTTT GGAAGAAcgtaattttgtaaattttttgtttgatgTTTAAAACTTCcgtt taaattcaataaaagttaTTTGCAACACTTGATAAGATTATAAATAAGAT ATCAGATAAACGTGGAcaattatatttatgtttttaactttAGTTCGGGG TCGAGGTCGGGGACGCGGAGGTCGCCATTCATCGCATCGCTGTCCCATCT GCTTGTTGTTGTTTCCAAGCCGAATGACCATGATCGAACACAAGAGAAAA CATACCAAAGTACACAAATGTAAAATTTGCAATGAAGGTAATATCTTATT TCCTTTTTCGTTTGTTACAGCAATTTTGCATGGTAATCGTGGACACCGTG GCAATCGTATTACTCTCCGTCAATATGATAGAAATAGAACTGGTTGTTGA AAAGGTCTATTGTATCGCCCTCACTAGCTCAAGCTACACTTTGACGTCGA TCAAGATTGTACAGTATTGCTCTTTAAAATTATTTAAGGAGATCAAACAT TTAGTTTAGGGTTAGAGAAATCGGTACTAATACTCCGAAACATTCGGAAG CTTTGGTACTCTCATTCGTCTTGTAGTCACGCCTTAAACATTTTGTAGAA ACGACGCCTAGCTTACATCTCTATATAGCAGTGGACTAGTGATCAGTAac tatattttattttcttacagGTTTTTACACGGAAGACCGTCTAGAGAAAC ATGCAACCAAAGAAACACACAGTCACCCGTGTGACCAGTGCGAGCGGTCG TACGTCAACAAACAATCGCTCATGCGTCACAAATTATCTCACTCTGAGAA AACACACAAATGTGATCAATGTTCACGCGCATTCAAAACACCGCGCGAAC TTAAATACCACGTCGAAGGAATGCACTCTTTATCACGTGATTTCGTTTGT GACGTTTGCCAAAAAGGATTTTCACGGCCGGAGAAATTGAAACGCCATCT GATGATCCACGCCCCAGACCGCCCTGTTTACACGTGTCCATTCAAGAACC ACGTCGGCTGCGATAAGACATTCTATAGAAAAGACAAATTGACCAGACAT TTATATTCACACTCGAAAGTCAAACCTTTCAAGTGTGACCAATGTGATAA ATCGTTCGCCCGCACGGATAATTTGAGAGAACACATACGCTCTCACACAG GTAAGGAGAAATACTTGAATTCATTTTGGAAGACCATGACGAATATTGCT TTTAGAAAACTCGAATTCTCTTCCGAGGAAGACTATCGTTTTCCATATcg ttttaaagaaaaagaaagtgatGTTTAGTTAAATTCAACCTGTACCATTA CAGCATTGATATTCGAGACCAAGGAACTTTAATAAAACAGTAAATCTCTT TATTTAAGATTCTTGCTGAGACtgactttttcttgttttgcggaactttt tttgaaatacttGAATTAAAGCCATGCCACCaaagttcaactttttcaat ctCTACACAGGTGTGTTCCGTTATTATTGTACTGTGTGCGGAAAAGGACA ACCAGGACCCAAGAAATTTCTTCAACACATGCTCAAGCAGCACAACGTAG AGAATGCAGAAATACCACGCCCCTTTGACGATGCAGCTCCTGAACCACTC ATTCAACAACACAAAGCTGTCATTGAAGCTGAAGCTGCCGCCCGCTTAGT CCGTGCGGCCAATAATGTTAAGAAAGACCAAGGAAAGGTTTGACATGTTC AATTGTTTAAAAGTTTCGTTAGAGGTGTCTGTCGGagtgttattattttt ctcaaaatcttctaCAAATGACATGAACAGgtacaaaaaatattgaaaaa cttcagaaaagtcgaaataatttaataaaatatgCCCTTTTACTTAAGGT TGTATGCATTCAAAGTAAATAACACGATTAACTTTTCAGAGATAATTAGA TTTCTGTCCGATTTCGAATCAGCGAGAATTGACTGGAACACAGTACGTAG AACCATAGAACACTAGATATATCATTTTCTTACTGGATTTTCTTCCACCT CAATAGAAAGTTCGCAAGGAGAATATCGAGACGACGGAGATTCCGTTAGA TGGAGCGGTTGCCATAGCAGCAGGGTTGAACCCGATGATCCAATCAACGC TCATGCCCAGTCCCACGCAAAATGTGACGTCAGAACAACAACAAGCCTTT GTAGCAGCTGCTTCAAGAGGTATGTTTTATTCTTAAAAACCAACGGTAAA TTCAAGGTCATAGTAAACAGAGAGTATCTATGAATTTAACTATATTTTTA TATGTCTATTNTTAAATTCAAGGTCATAGTAAACAGAGAGTATCTATGAA TTTAACTATATTTTTGTCTATTCTCCTGTTTTACATAATATACCTACTTA AAGAAATTCGCTAGCCAATATACAACTTTCTACAGCTAAATCTTCTTCTA AAACTTCTTTTTCGGCGAAAAACATATTATTCGCTCCAAGCATATTGATT TGAAAAGTTTCCCGGATTAATTCCCCCCAAGACGTACAAAAGCCCTATGT TCCATATTTCAAACAACCAGGAAAAGGCTTATGTCTATGCAATCTTTAAA TATCAAGTTATTATTCTTCACCCTTAGGAAACATCGAAACTCTATACACC ATCAGTCACACCGGTCAAGGTTCCGGATCTCCGCAATTCCAAATCAGCCG GGCACAAGATACGATGGTACGTAACGAACAACTACTACGTGAACAATTGG CACGTGAAGGTCTCACAACTCGAGAGGTTGCTATAACGTCTGCCGGAGCT G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044049TCONS_00044049Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044049-proteinTCONS_00044049-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004888supercontigsc0004888:295..5295 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZNF853PREDICTED: zinc finger protein 853 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.15 7.64 4.62 4.65 7.18 5.37 14.19 14.29 8.9 11.57 9.3 7.26 10.95 14.07 8.4 9.47 11.85 11.2 6.35 6.93 8.87 8.13 7.9 9.54 19.06 16.5 3.84 3.12 5.7 6.68