XLOC_027449 (gene) - C. hemisphaerica

Overview
NameXLOC_027449
Unique NameXLOC_027449
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004562:1..3456+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027449 ID=XLOC_027449|Name=XLOC_027449|organism=Clytia hemisphaerica|type=gene|length=3456bp|location=Sequence derived from alignment at sc0004562:1..3456+ (Clytia hemisphaerica)
GCGATTCTGTGGTAAACACCGAACATATTATTTTACATTTCCAATCATAT
TTTTATAGTGGTAACATCAGATTAACGGTGTCGGATTTTCAAAGGTATGG
AATTTTTATGgatatttttaatctttttaaagcttTTACTGGTATATTTT
GTCATAATTTGCTGATTATGAAGGCGTGATTTGGGCACAATCCATTGACT
TATTCTGTTTAGAAACTTTCGAAtttaaattcttgattttttaaacattt
gcaTGCATCCATCCCAAAACAACGGAATTTATCACCAGTGAAATTGTTTA
AATCTAACGTAATTGAAAAATTCCAGACTTTCTTGGATCCTTCTGTTTCA
AAAGATAAGATAATGTTATGACTATCATGAATAAAGCCTTTNAATTGTTT
AAATCTAACGTAATTGAAAAATTCCAGACTTTCTTGGATCCTTCTGTTTC
AAAAGATAAGATAATgttatgaatatcatgaataaagccTTTTGGATGCA
TCCTAGATTGTCAAGAATTTCTTGTAATCTTGGTCACAAactattaattt
ttttaacattttcaattcattCAGGGATTGACCATGAAGCAGACTATCGC
AATCATCTTACTCGTTGCAGTATGCTTGGCACATGCCAAAAAAGGTATGT
CATTTATTTATCACTTCTAGTGTGGTAACATATTTTTCTCCACATTTCAA
GGGCAAATTTGATTCGATTTGGATTCTCCAAGAATTTAAGATACACTTAC
TTAAAAGAAAGATTTCCAAAAGTATTTCCAAGGTATAAAAAGGAGAGGGG
TTCCAAAATAAATCCAGCTTCGGGGCACTACACTTTCCTCcctacacccc
ttctcacagactcggtaggatttttcagccagtgggggttaaaaataacg
gactgaaactcgatgggggttttcccatgtttttttttatggctggggat
tcatattcttttgtcagaaaattgggcggggatgggaaaaatagcatgat
attttccagtgaggattggtttatgtGATTATTTTcggtggggacaaaaa
ttggagtataattttccactggggacgttatcttggccaatttttccagt
ggaaggAGTCCCAGtgtgtctgtgagaagggggtgttttgcTTCTGTGTC
CACGTTGCTGGATCCAAAACCAACTGATTTATGAGGGAGGGATCATCAAC
AAGTCTTTAAAAACTTAATCCGTTCAAATGAATGAAATCTGCTCTTTAGT
GTGATTCTTTTAGACCAGGTAACGGTGTCCCGTTTTGCtccgaaacaaaa
tgaagccattctattggttaaattcaatGTTTACGTCAtgtctaaccaat
agaatggcttaaTTTCGTTTCTTTCTATTCTAGTTTCTTGTTCACAATTC
AGTCACGCATGTTCGTTTCTAGTTTAGCAACTCGTTTTGTCATTCATTCG
TTCGTTTagtttcattcattcattcacttTGCATGTTTTTCCTTCTCATT
AACATCCGCATCTGTCATTGGCCTTCATTCGATACCTAGCTCGCTTTTTT
CATACACGCTTCTTTAGTAAGGACTTGAACGAGTAGACTTTTTTTATTGT
GGTCGACACTCtttttacactcttttttattataacaattttataagaac
agtgcGGCtcagaaaagtaaaagaaactaaagtctgtctcgaaataattt
gcagctggagaaagaaatggctgtaacttttgatagaattcgaatcaagt
tgcgattaagtgcttgttagaaagatattcgtgagtggaatattatcaag
taaaaaaattgagaaaaaaaaggaaaatgaaaatgaaaaatgaagaagaa
aaaaatcaacttcttgtagaaatgNtaaaattaccattttcacaggagtg
attcttcaatcttagatcatcatcactgtcaaaaaaattttcaaaaatat
tcattcattcaaaagatatcaaacaaaaattattgctagttgactctata
aaatagtaaaaactggtaaaaaacgacaaaaaaacagcctttcgtcgatc
aaccagcaataaactttgtttgatatcttttgattgaatgaatatttttg
aaaaattttttgacattgatgatgatctaagattgaagagtcactcctgt
gaaaatggtaattacaccacatttctacaaaaagttgatttttttcttct
tcatttttcattttcattttccttttttttctcaatttttttacttgata
atattccactcacgaatatctttctaacaagcacttaatcgcaacttgat
tcgaattctatcaaaagttacagccatttctttctccagctgcaaattat
ttcgagacagactttaggtcTTGAACATAAAAACATGGTAAAAGCAATTT
AATGCTCAAGAGTCAAAATACGGACCAAGCATTCTTATAAGAATCAGTGT
AATTGTGCTTCAGGTTATTGAATCAAGATAAGGGTATCATTAACactatt
ttcagcatttttctaTTCTTAAAACTGTTACAAAgaagtttacacgtttt
tttataagaacagactatataagaatataaggcttcgattgccaaaatat
taagaacaagttaagaacattttaatgctttggggacaaaaatgctctca
aaatgttgaaattaagaacacgttaagaacttttttaggcttaaagctcg
aaaggttaagaacatcctaaggcttcaaagattttggatattcttataaa
aaaacgtgtacttctcCAAAGTTCTTGTATAAAGAAAGGTGTATGAATTT
TGCGTTTTAGTGAAAGAGGCATACATGTACCACGGCAAAATTGTGACGTT
AGAAAAGGACGTTAAGACGGACGGTAAGGGACTCACTGCATTGACGTTAG
AATGAATGAAACTTCTCGACTTTATGACAACACACGCACGTACACTTTCT
CGTATCATCATTAAATAGAATTCTCTGCTCTGTTGCTCTTTTAAAACTAC
TGAGTCTAATATTTTTGAGTCTGAAAAGTTCTTTCTCTTGGGCATTCTTT
CAtcataaaaagtttgaaaacttGACTTTGAAACTTATgggatttttctt
tttccaaaatgcTGTCGTCTTTTAgttgaacaatttttgataaaatgatg
aTACTAAGTATTGACGGACTTTTACGATGACTGTTTAGTTTAGACTTCGA
CGCTTCTTTACTTCATAGAAAAACGAAGTGCACCATCATCCAGAGAAGGA
GCTGGTAAAAAACGATATTTCTGTGGAGCCCAATGTGCACCATCATGTGC
CCCATCTTGTTCACCACAATGTTGTGCCTCCGCTCCAATGGCTGCCCCTA
TGCCAATGGCTGCCCCAATGTGCGGTGGTATGGGATGTGGACCAATGGCT
GCTCCCATGGCTGCTCCATGCGGTGGTATGGGAGCTCCATGTGGTGGTAT
GGGTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043773TCONS_00043773Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004562supercontigsc0004562:1..3456 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.18	0.21	0	4.46	1.96	162.08	195.81	194.92	177.07	263.17	183.73	573.15	488.41	398.69	1125.75	756.25	727.21	0.59	2.24	425.28	493.55	371.49	398.07	466.32	554.12	53.13	18.48	1.63	2.7