XLOC_012186 (gene) - C. hemisphaerica

Overview
NameXLOC_012186
Unique NameXLOC_012186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000393:42951..50724-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012186 ID=XLOC_012186|Name=XLOC_012186|organism=Clytia hemisphaerica|type=gene|length=7774bp|location=Sequence derived from alignment at sc0000393:42951..50724- (Clytia hemisphaerica)
ATTTCAGACTATAAACTAAAAACGAAAAATTGATATTAAAAATAATTATG
CCAATCGTGTTGACTCAGAAATGGTTGTTAGATTTATTGAATTCAAAAGC
AACATATCTTCAATATCATGCATTTCAAAAGGTATGAAAATATATACCAT
TTTAAATAAATAGGCTTTCATTTCTACTGCAGGATCACACTGTACGCGTT
GAACACCGTTTTACAATAAATTTAACTCCTATTTCTGATCTTAAAATATC
TACAATAATAGCTCCCAAAAAAAATTAAGTATGTACTTTTAATAAACTGT
AACGCTTGAAGCTGTTTGTTTTTTAACTTTAAAAAGCTGGGAAAATTCAA
GATGTAGTTGTTTTTATTTGTAAATTTTAACCTATTGTCAGGCACAATTT
GCATGATTAGAAATTGGCCACCAATTCTAGGGTTGCGTCAATGAAACGGC
ATTCAACCATTGTTAACTTGAACTCATCCCTTTATCATGCAGTTCATAAT
GTGAAAGGGTAGTTCCAATGATGCATTACGTTATGATCAAGGTTGAATTC
TCTTTCTCAATGTACAGGGAATCAGGCATAATCACAAACTGGAAGGTGCC
GTGGCAATCGCCCGACTTGGTGGCTCCAAGGAATACGTAGAGAAGTATTT
TGACGTTATCGATAAACGCTATTTGAAATACACTGGATTAGAAGATGATG
AAACTCAATTGTTGGAAAGAGATTTTCTCCAGGTATATTTACATTCGAAT
AAGCTTTCTCTCTGGTCATAAAACTGACAGTTTGTGTAGTTTAGTGTTAA
TCCACTGAAAAGATATCGCGGAAAATAGACCTTTTGCCAGGTCACGATGT
CATGTTGAATAATAAAAAACTCCAGCATTATAACAATGATAGGAAAGTAA
GTAGCACACACGTGTACTAATTATGCTGCTGTAATTGTTCTGATGCTGGA
GTTTTTGAGGATTCAATTATGAGATTGTGCCTAGCAAAAGCACAAACAGA
ACTGAACTGAAATAAGTTGGAGAAAATTCTGTAGAAAGGTCAGCAAATGA
ATTATTTTGTTGTTAAATGAGAAAGCATAAAACTCTTTGATTTGAACCTT
TTTGATACTTTTCCCTAGTCGGACAAATTGGAAGATTACCGAGGGAAGAA
TCAAGCATATTACAAAATGTTATCCATGTACACTAAACTGTACGAAACCA
AGTATGACAAAAACATAAAAAAAATGATCCAAGGTATGTCTTAAGTTCTA
GGATACATTTGAATATACACTCTATAAAGTCATTTGAGTTTAGGAAATAT
CGAGTTATGGAGTAAGGCCTATAAGGCATTGTTGACTGAAGGGATTATAA
AACTTGTTAGAGTTAAGGAGACATTCTGGTTACAGAGGTTCAGGTTAAAG
AGACTAGNCTAGTCGGACAAATTGGAAGATTACAGAGGGAAGAATCAAGC
ATATTACAAAATGTTATCCATGTACACTAAACTGTACGAAACCAAGTATG
ACAAAAACATAAAAAAAATGATCCAAGGTATGTCTTAAGTTCTAGGATAC
ATTTGAATATACACTCTATAAAGTCATTTGAGTTTAGGAAATATCGAGTT
ATGGAGTAAGGCCTATAAGGCATTGTTGACTGAAGGGATTATAAAACTTG
TTAGAGTTAAGGAGACATTCTGGTTACAGAGGTTCAGGTTAAAGAGACTA
GCTACTTTGGGCTAGAATTTTAAATAGGATCCACTGACAATGATATATGA
CCTTTGTTTTAGAGAAATTGCAATTTTGGCCTTCTGATTTTGCTTTAAAC
CCATTAAAAATAACTTTAACTCCGTAACTTCAAATTTTTAAAATGACTTT
GGAACGAAGCTTTCTCTACCTTTACAACTCAAATTCACATACGCTGTCCG
GATTTCATTCAAAATTTTCAGGCGTTTGTCCTGATATCTTGGACGGTCCC
TTGCACAGTTCATTTCATGTGGAGCCATTCAATTAGCATACGGTTTAGTG
TGTGGTTGTGATCAAGCTGTTTTGGAAGGCATCACTTTCATGGATCAACA
GTATTCCCCTGTGTTTCCTAACGATACCAATGATGAAAAGGTAGGTGATA
GCACTAGATTTGATTACTTGTAATGTAGCTTCGCCTGTGGCCTGACGCAA
ATTTATAAACATTTGAATTGGTTTCCTTTGAGAACAAAATACACGTAGCT
GCTGTAACGGCACAAGAGGTTTCGGTTTGAATTTTATACTAGTGTCAAAA
AACACTACAATTAAATTTTTCATTTCATGACCATGTCCATGTATTGGCAC
ACAACTCTAAAGCTTGAGCCTGATCCTTTTCACCTAAACGTCACTTTCCA
TGTAAAAGTTGAGAGATTTGATTTTTTCCATGTCTAATAAATTTACTCTT
AGGTTCCAAATAAACGCCCCCTCCCCCCGCTTGTTAATTTTTATATTTAC
CTTATTTTGGGTTTTCAGAAGTACAATTTCCAACCCCCCGGCAATTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAAAAAATTTCGTAAATTTTCCAACCCTCCCCCCTTTTTTATTT
GGAACCTAAGAGTACGTGACAAGATAAAAGGGTAATTTGGACATTCCACT
AAGTAAACATTGATATTGTATGGACATTTGAATCCTTTCGGCGACAATAG
ACGATATCGGCTTAACCGAATTCTCCCCGAATGATTACCCATAATGCATT
GCGCAAAAAAATTCACGGACGATAACCCTAACCCTAACAATGCATCATGG
GTAATCATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTGACCCACG
AGAACAAGTCCCTTCATTTTTTAACAGAGGAAAGATTTGACGGGTTTCGG
ACACGGCAAGAAAGACATTTTCGAATTGTTGAACGATCTCGCAAGTAATA
CGACATTGAAAGAGAAAATCAAACTGGATCATCAAAAAGGCTTCGAGTTC
AGGTACATCTGTGTTAAATTTGAATCAGTGTTATGTTTTGGACGAAACCT
CTATACTTATTGATTTTCGAATGTCATTCGTTTTTTGCAATCACTCTACA
TTTTTTGCTTTCAAATACTAAGAACAGCGGACTTTTCAAGAGAGAAGACT
GCTGGCTGAATCATTTTATTAAAGAACCACCTTTCCCTCCGACTTTTGTT
TAAGGTTTGTTTATGTTATCTTTCTACCTATCTAACTTTTTCAGAAAGCA
GAATCACATGTACGGTGCTTACGGCTGGTCCGCATTACAATATCATTCTG
AATATTTCTTCGAATTGACCAATAGTATTGCGCTGCCCGAATGGTTTGTC
GTGGAGGATAAGGATATGACACAGGTAAAAAGTTTTGAAAACCGTTTTAA
TCTCTATTCAGATGACATGTATCTTTTATTCAAATTTTAAGGATTTTACA
GAGAAAGAAAGTTTACTAGTTTACTACCGGGTGCTTCAAAAAAAAATGGC
CTACTGTTTATAATGAATTTTGTCATTTTGGGTAAGTCAAAATTTTTAGT
TTTTAACATAGCTTTTGATTGACTGAACCGATTTAAAAGTTTTCTATACC
AAAATTCAATTTAGGCTTTCCTCTATTCTTGATATGCGTAAGTCATTTTT
CTAGCGGAAACACCCTAAAAAATCCGGGCTCACCAGAAACCAGAAACCTT
ACAATATGAATATTTCTGGTGAGCTCTTTATTTTTGCCTCTCAAAATTGA
TCTAGTGATTTACACAGAAATGCTTCGTTTCAGCTATTCCGATTATTTGG
TTGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCTTA
ACGACTTTTTTCTACTCCATGGGATTACAGGTTTAATAGATTTTTTCTTT
CTTTTACTGTACTTATTTTAGGTTTTTCCAAAATAATCAATTTATAAAAT
GTCGAAGTGTCATATTTTCTGTCAGGGTTTACCCTGAACACCTAGGAAAT
CCAAGGGGTGAGTGGCATCTCAACGAAAATGACCTACGTTAGATAAACCC
TATCCTGTATTTGGGGAATGTTTTAAGAAGTGGATTTCCATAATTTTAGG
AAAAATCAAAAGAACACTCATCTAAGGAGGTACCTTGGAAGTTAAGAGTA
CAAGGTACCTCCTGTCTTCACATCGCCTAAAGGTATTTGTGTATGTCGTC
GGATTATATGTTACACCAATGGAACCCATATTAATATACTTGTTCTTTGC
TTTAGGGAGTTGGTCTTACAGTAAAATTGCAGACTTCGGAATGGATTTCG
ATGTCGCACTCCTCGCAATACGTGCAATGCTTTTTGGGTTATTGGTGACA
TATATTACCCAAGATACACCAGCACTCGTTCAAAAACCAGAGGAATATTT
TGATAGCCCTCTCACGCAAGATGTTTGGAATAAATTCTTGGATGATCTGT
TGAAGAAGGAAGTTATATATGAATTCCACGTTTATAAAGTATGCTCTTAT
TATTTCCTATGGATCGGATATCTCCTATAAAAAAATCGCCCGGGGTTGTT
ACTTAGGCAAGTGAATGTACAGGTTTGTACAGCCCTTAAAGGTACCTTTT
TGGAACGTTACAGTCCATGTAAAAATAAGAAAATTTGAATGTTTTTGCCC
CAAAAACCATCTCTTTCGTCAAATTAGTCCCGATATGGGTCGTTAGATTC
ACAAAACTTTCCAAACTTTCCTCCTTTTTAGTCCCGCTAAGGGTCCAAGG
CTCGAAAGCCGGGAGGCACCCCCCGTCCCGTCATCCTATAAACCTTGCAT
CCCCCCTCGGGCGAAATTGTGTCCCGTTTGGCATAGACAACATATTTTTT
TGACAGTACTTTTCTACATTCGAATTTTGACATTTGAAAATTGAAATGTG
TAACATAGACTGATGTTTAACCCTATTAGCCCCAGGGGGGGGGGGGGGGA
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTAAACG
GCTTGAAACCTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTGCA
AAATTTTAGGGTCATAGGTCATCATCAAATTTGGAAAATTTTACTCATCG
TCAGCATAGATTTTAAGGAAAAATCTTTATGGAAATTGCAAAAGCGGCAA
TTATGTTATTAAGCGCAGCCTTTTGTATTCAGAATCTTTAAACAGAATCT
AAATATCTTTATTGATTCGACTGTAATAGACATTTTTTAATTCATATATT
TTGTTTTTTTTCGATAGGTGGACATTTTGTGATGACGTCATCGGTTTTTG
AATGACGTCATCGGTTTTTGAATGACGTCATCGGTTTTTGAATGACGTCA
TCAATTGTTTTTTTCTTCCAGGAAATTTGTGACCATTTCTCTTCTAGATC
GTAAATAATTCGAGGGTGGTAGATTCTACCCCCCCCCACTGCCTGGGGAT
ACAAAAATCAAAAAAGCTTGGGGCTAATTGGGGCTTATGGTATTTTTCCG
TTTGTTTGAATCTCACCAACCAAAGGTTAGGCAAAATTTTAAAAATTCAT
TTCAATGAATCTAAATGAAAGCGCTCTATTTCTCAGGTTATCCAGTGTGT
CTATGAACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCATCTATGGACA
AATATTACATGGCTGCTGCTAAAATTATCCTTAATAACTCATATCCCCCT
GGTGGTAACATCCCTATAAAGCAATCCAACATTTTATCCGAATGATTGTT
TTGGTGGCGGTATGAGAATTTATCTTTTGGTATAATTGAATCTAATGTAA
TGGAGTACAGTAAACTTTCGCTTATTTGAACTTCTGAAGAAATATTCGCG
GAACAAATTTTTGCGGAATTTAATTTCGCAGTTTTTTTTTGACAAATCCG
CGAAATTGAATTCCGTGAAACACAAATAAACAGTCTCAATAGATTCTCAA
GATTTGGAAAATCGCCTCTAAAATTGGTCTTTTTAGGGCAAAAAAGGCGA
TATTTTAAACAAAAAATTCTTCCAACCGCGAAATTAAATTCCCGCGAAAC
TTCCCAATTTTGAGCTGTGAACTACGAAATTAGGTTCCGCGAAAATTTCT
TCCTTTAAGGTACTATTCGAATCTTTCTATCATTTAAGCTTGTTTCCAAT
CCCTGTCAAGGAGAAGCCATCTTAAAATACAACATAAGATTCCCCGTTCG
AGTTCAAATTGGCGAAAGTCAAATGTATTTAGATTGCGTTTTGAGATTTT
TGGTCGCATTTTTGACGACAGTTTGAATAATATACGATTTGGTTTGGGTT
GCATCACTTGTTTTATTGAAAGATGATATTTTAAAACGATTGGTTATGTA
ACAAAATGATGGTTTATTGAAGGCGCTTATCTACAATATTGAAGTTCGTA
TAACTAAAGACCATCGGATGGAAATGAGTCGATCGTGTAATTGTGACTGG
ACTTGTCCCGACGGACGTTTCCTCAACAGACGTTTCCCCGACGAACATTT
CCCCGACGAACATTTCCTCAACAGACGTTTCCCCGACGAACGTTTCCCCG
ACGAACATTTCCCCGACGAACGTTTCCCCGACGAACATTTCCCCGACGAA
CATTTCCCAGACGAACATTTCCCCGACGAGCATTTCCCCGACGGACGTTT
CCCCCGACGGATGTTTCCCCCAAACTGGACTTGACATTTCCCAGACGGGG
TTTCCCACGAACGGACTTTTCCCCGACTATGACCAGACATTTACCCGACT
GATGTTTCCCCGACTTGACATTTCCCAGACGGGGTTTTCCACGAACGGAA
TTTTCCCCGACTATGACCAGATATTTACCCGACTGATGTTTCCCTGACCG
GACATTTCTCTTCTCATAATGCTTTTAAAGGCAAGTATAATTATTGTAGA
TTTTCCAGGACTAGACTTTACTAGACAGATATGATGATAGGACTAGATAA
ATGGTTTGAAAAGTTTGATTTTAAAAAAGATTTTAATATTAAGCATATAC
TTTTATGGTTGTTTTATCTTTCTGTAGCAATCACTTTTTAGTTTATCATA
CGTAAATTAATGAAAGCTTTTTGTAAAGGCTTTGTTTTTAGAATTTTGTA
AATGAATTAAATATTTATTTAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021722TCONS_00021722Clytia hemisphaericatranscript
TCONS_00021721TCONS_00021721Clytia hemisphaericatranscript
TCONS_00021720TCONS_00021720Clytia hemisphaericatranscript
TCONS_00021719TCONS_00021719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021722-proteinTCONS_00021722-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:42951..50724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.4	13.13	49.11	49.78	35.67	27.67	21.39	20.75	16.8	19.1	18.32	18.05	9.62	9.65	10.36	13.03	15.13	15.96	7.35	10.03	14.11	16.06	12.2	12.39	25.19	22.43	14.56	10.45	8.63	8.54