XLOC_011719 (gene) - C. hemisphaerica

Overview
NameXLOC_011719
Unique NameXLOC_011719
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000373:286578..296881+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011719 ID=XLOC_011719|Name=XLOC_011719|organism=Clytia hemisphaerica|type=gene|length=10304bp|location=Sequence derived from alignment at sc0000373:286578..296881+ (Clytia hemisphaerica)
TTTGACAAGATTGGTCCAGGGTTTTAGTCAGTAATCGATGTAGAGACTAC AGTAGACAAGTGGTATTTTTTAAACTTCCTAAATTCCTttacttaatatt ttcagtatcaaaactttcattttgatttcCATAGAAAAGGACAGATATCA GAAGATCTTTTCACTGGCATACATCAACCTGGCATCGCAAGATGGTACCT GTTTACAAGATGGACAGTACGAACTAGCTGTCTACAAAGTAAGTTTGTAG CCAGATATGCTCATCTCATAGCATTGACCATTAGCCATTGCGTCATAGGA CACTACCCAATATCTCTCNCAGCCAGATATGCTCATCTCAAAGCATTGAC CATTAGCCATTGCGTCATAGGACACTACCCAATATCTCTCGCAGAGTCGA AATCACAACTGAAAAGTCATTTAACACACTGAACATAGTCAATCCAttta agttttcaaattttctttttaatctaAATGTTTCTTAGTGTGTATTCATT GTGTGTTTTTAAAAATCCTCAACACCCAGATAACGTACAAAGCTCTCTAT TAAGTCTGCTGTCAAACAAAGAAAGCCAAGGGCAACTTtactcttttttt attcttagtGTGAAACAAAGAAATTGGAAGACTGCAACACCTATCTGAAG CTACCTTCATTGAAATCTGAAGTGTCGCAACAGAACAAGAAAAATCTCCA CAACGGTGGATTGGCCTTCTCAAAGACTGactctttcaaaattaattttc aattatGCTCAACCAAACTTGCACAAAACGGTGAGTGTTGACTCAAGCCT TTATTATTTAGACTGTTGGACTTCTTTACGCTTTTCTTTCTCTCGTTTAC AAAGCAACTTTGGCTTTTCTTTTATTAATAATGATTAGTATTGGACTGAG GTGTTTCTTCTGTCTGTCCACCAGGCTAcaatattttcatcttcatatcG GTGCTCTTATCGGTAAAAGTGTCCCATCCTCATTTCTTTCAGTTGATTTG CTTGGACTATTGAAGTGGAGAAGTCAGAAAGACCAACTACCAATCATTTT ACCCGCATTAATGAAAGTGGGCGGTCAAGAAATTGTAAAGGTAAATACTA TTGTATTGTAACCTCATAGATCATTTTCAGAGAACTTTCTCATCGAAGTA cacaaattttgaccatttcggTTGTGGTTGAGTTTTTCTGGTACTTTTGG TTGCATCACCATAGTCTATAGTCTATATCGCCTTGGTTATACGGcgatga aaacaattttttgactcTTTATAAATCTGACTAACGGGGATttattttag ttgttttttaaatctattgAACTGTCGTAGCttgcttgcttgttttattt tgttttgttcaatATTCCTTATCCTTACACTTGCCTTGAATTATACTAAT ATCACTGAGTATTGATGTCAAGGAAATGCTTATCTCCTTGTTGTTGTAGT TTTTACAAGACACATTTGATGCTTTGTTCGCCATCCTCATGGAAGACGCA ACACAATACGGAGAAATGGTCTCCAATGCTGTCGTAAGAACATTATCATT ATCCTCTTTTTACATGGCTCTTATTCTCTAAGAATTCAAAAGATCAAAGT GCCTTATGAGTTGAATGCCCTAGCTTGTTTCAGGATAAATTCTTTATAAA CACTTTTTAATGTAATTGTTAGACTAGATACTATTTGAGCATGCATGCAA TGATATCCTTCATTGACTAAAATATCAGttaaggtagagagtctatcacc acaCTTTCCTATCACCTTACCTATTAGGGTTAAGGAATACAGacgatttc ttttttcttttaataggTATTTTGTATCGGGCTGCTGGCGGACAAGAAGT ACCATCGCTTCAGATCCATTCTTGATACTTATATCGAGAACTTGTTCAGT TCTACTAAAGCATACATGTAAGAACATACAGTCAACTCAcactaattcga acctctattatttgaatctttatgTAATTCGAGCTTGAATATTGGTCCCT TCAGCTGGAAAGTGATATCGAATCCTCTcccaattcgaatctttctcaaa TTAGAAGAcaattcttggtcccttgaaaattgaattagacTGAGTCAACT GTAATACTTTCTTAAAAACTGTGCTATCAATGGGCCTCCTCAACGGTTTA CGTGGTGGCCTGATGGAGTGATTTCGATGTTTTTGGCATGATGCGCGATA GAGCATAATTTTGATGCGTGATTGAGATGatcgttttgaaaaaatgtagg CGATCGCGATAAAAGTGattaaaattgttgaaaaaatttccgtCCCTGAC TTCATCTTCTATGTGAAGGGTATGTTGAATCAAACTGTTACTTGAGGGGA AGAAACTTTTCCCGATTCTCGGGatttttgccctttttcgcGACAGTTTC TGCCAAGTAAGAAATTACAcgagaaattcgcgaaagttttttccgCGAAA AGTACActtcttttgctattttaagccccattttcagtttttgtgcattt ttattgcttttttgcctgcaaaatgaaataacattctaaaattcgcgaaa gttagaTCCGCTGAATTTGTTCCAAAAGTAAATTCGtgaaatttcgcgat tttgcaacctcgcaaaagtttctgcacGCGAATGTTTCCACTCTTAAAGC AATTAATTCATCACATCTTTCCCAATAGTACCCTGGTTGATGTATTGCAA AAACACATTGAAGGTGTGAAACAATCTGATCTTGCTGGCGAGGGCAGAGA ATACATCATGAAATATTATAAGGTATATTTTATCTTAACTGTCCTTTTCG AAAAACAGCAGCTTTTTATTCGAACTCTAGCCCCGAAATTTTAGCAGCTT GGACATTAGACATAGCCGTTATTACATCTTCAAAGCTAGCAACTGAAAAG TTTTGACTGCGTATTTCCTGTGATGTTTTGGTTCTGCTAAGCTCCTTTTT AACCTTCCACAGGCTCTGGAATATCTCATCAAATTTATCGTACGGTCAAG ATCCTTATCAGAAAGGTAATCGATGTAAACTTTATTTTATGGTACCCAAA GATACCTCTGTAATGCACACAGCCTCTTAAACCGACAAGATGCACTTTTT GATAAAGACCCCTTAGTAATATTGATCCGCGCGTACTCGAGACAGTATGT ACAAATAAAATTAATGAAACATATAGACGATAGACTTTAATGATCAATAT TTCTCTCATTTGAATTACTATTTCCCAGCTTAAAGCTAATTTGATGTATC TGTTGCTGTTCACCATAGAGCTGCACCAGGGAAAGGACGTTTAGAGTTTG AAACATCCATCACAAACCTTTTCATATCCATCACTGGAACGATGACAATG ACAGGAGATATTGTTCTTCCTTTACAAGTATGCACATTTTATTTCACCTT GCATATTTTTAGCAAAGTGAAACGATTACAGTCCCCATGAACCTAAAAGG TCCATTTCAtatccttaactcgaacatgtTTTCTACAAACCTTTGCGGTC TGTGCTACTAAAAACTAAATTGCGCTATCATGTCCTCGTTCGCTATATGG TGTCGACAATACGGGTATATGATAAAGTGATCCTGTTAATTTGCACACGA TATGTCGTTCATCATAAActaaagaaaaatcatttatATCAAACTGTTCA GTCTTGCTAactcaaattcaaagggttAATCTAATGTCCTCAAACTAACC GGAAAGGTTACAATCAACCAAAGAATTAAGTGTTTTTCCTTGGTTTTGAA GATTTGAATAATGAAAGCTGAATTATCCGTATATTGATGtaattattctc aacttcagttgagctagaatctgacaatgtctgtatgtatgtatgtctgt atgtctgtatgtccgtccgaaagctttggggcagcctggagacttcaaaa attgttcgatttggctcaaattttgcacacttgttccttgggtgaatatc ttggggtctacaattggNTATAAActaaagaaaaatcatttatATCAAAC TGTTCAGTCTTGCTAACTCAAACTCAAAGGGTTAATCTAAattcatagtg tgcagaggggtctgaaccccccccccattaatatttcatccccccctata aaggtatcccccctatttttaaaattttttgatcccgcaCCATTTACAGG GGCCNgccactgaagttgagcccagtgcgttgcgcacgttctaCTACTAG ACCCAAGATTTAAACTTGGATTTGATTACCACTATTTTCTTTTGGTTTCT TTTAGGGGTGTGCATTGAAATATGTACCAGCTGTATTTGGCGATCTTTTA GAGGTCTTTAATGCTGAAGAGCTAGGGTAAGATCTTTTAGACGGCTTTGT TTGTGatactagcgagtttatgtatttgcacttttgaggacggtagagtg acggAAGCGATTTAGAATAAGCAGCAGTTCTGAcccacaaaatcgaggac ggtaaaagttgatttaccatcgtcctcagttggtcaggatctagtcaaat tagaaccttaccgtctccgtcccagaaaaacacacatacataaattCGGT GCTGTTAATTGTGATACTGAtacaatttttcattatttaacCCTTGAATT TTAATCAATGAGTGTGTATGGTCAAGACATGTTCAATCTTGGATAATGCT GCATAGTTCTCTTTACTTTGTCTAAAGCTGAAAACGTCCTACTTAAAGCG TAAGTGGCTAAATCTGGGGAATCATGGTGCCCTCGCCTACTATCGGTTAG ACAGTCGTACAAatagtttttctctttttgtttagTTACTTTGCACGTGA TTTGGTGGAGAAAGTTGCACCGAATAAACTACAACGACAAAAACTGACCT ACATCCACAACCTCGTCAAATCACCCTTGTTTTTCAATCCAGGTACAAAT TTCGGCATGAGCCGGAGTTTTGTTATATAAGACACTGTTGTTGCTGTTCA TTGTTTATAATGTTGTTTTTGGACAGTTTATGGTGAATCTTTTTTGGCAA CTTAAAGTTTGTGCGGGGGTTGACCTCCCTCCTCCAGAATACCTTGTAGA AAGTGCTAACTTGTGAAAAGGTCTTACTCTAAGAAAAGACGTACCCTCAT TTtacatgaaatgaaaaacaaccTAGAGTACATAAAACTAAACAACACTG TGTTTCATGTTAGTTGGAGTGGAAAAgtggaaaaaggaaaaaggaAATGT TgacctttgtttttattttagtgagtCGAAGTGTGATCCGTCCTATGATA GTGGGCCAGTTGAAAATGAATATGAGAAACTTTGAAGAACTACAAATCTG TGCTGACGTTTTGAACGAGATGTTATCCAATTACGATAACGTCGAACGAG TGGTAAGACAGTCTTTTGACCTATACTTTTAttcgctagatttaaaaaag tagACAGGTCTTTCTCTTGTCAAGAACCTGTGAGTACGTACCTCCTCGAT ACCGATAAATTAACTAAAGTGAATAATATTTAGTCCTTTGGTATTGATCA GAAACACTATGGCTTCACTTACTCGCTGAGTAGGATGAAGCGTGTGTATA TGTATGTCTACTATTTGAAGCCTAAGAATACTTTTCCGACACATCACATC AACCACCTTCTATACTGTTATCCGGTTGTGTTTTATGATTTTGAgtgtta cacgctttttttttataagaatacacttaataagaatgtccatgatgaaa tggatttacaccattcttataaaaaaaagcgtgtaatgcgAAATGTAAAA TCTCTTCAGTTGAATGAAGTAACCAATACTGTTTTTTGTGTTTCAGGGTG AAACATACGAAGATGTTTCATACTTGGTGACCAATCTCTTCCATTGTATC GTTTCCACCGTCATAAAGATGAATTTGTCCAGTAATTTATTCGTAAGTTG TGTCCGAAacgaaatttctttcatttcacgTCAGCTGGAAAGGACCTACA GATTCcccatagtttctaccccctctacatttaggggggggggtcttggg ttttgatgaaccaaaagcaagggggtgttaaaagtatgactttcctaagg gggTTGTCAGTTAAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTCTTCTTAGATAA GGGGAATCTTCCTTGATTTATgcgaaatttaaattttttcatttatactg attttctaaggggagtgtgaaattttaaatgatttccTAAGGAggggtta gcacttaagggggggggtcctcttacctaaggggggggtcttgacccctc ttAGAAACTATGTTCCCCATTGAAATCCCTctatcttttttactttttct tactCACAACAAGATAATATACACAACGTTTCAACAAAAGTTCTCAAAAG TGGAGGAGCATTTCGATTTCAAAACAACTGAAAAACAACTTCAACTTGTA CTTGTAGCATCTTCATTTCCCCTTGACACTCTAAGTTTTTATAAATCATT TGAAAGGCTTTGTGCGACATTTTACCATTTGCagccctgaaaatattttc tgatttaAAGAGATTGTTACGTTAGATAGTTTGAGATATTCGGCATGTGA TTACTTCTATTGTTCTGAGCAGAACCATGTTTTTGTTgactattttcaaa agtcgagaTAATCAAATTACCAATCTTGACTTTTCGTTAGAAAACAGAAT TTTAACGTATGAACCATTGTAAGaacacatttttaaaaacttcaaattct GATCTCTACagttaactctctctaattcgatcttcaagagacCAANTTTT CAAATTCTGATCtctacagtcaactctctctgattcgatcttcaagagac CAAAAATGTTCTTCGATTTTGAAAAGAATCGAATTTTATATAGTATTTTA GGTGAATTGAGAATTggttcaaattagagaaagattcaagTAATGGAAGG TTGAGAGTTCACTTTAGGTTTTACTCAGAACCACAGAAGAACAAGCAAAA TATATCAAACCTTCTCTTTAATACATTCTTTTACGTTGCAGGGAAATTAC GTGGCGTTCATCATCGGTATTTTGGACTTGATGAATGATGAACATTACGC GGAGTATGTGAATTCTTATCGAGATGACAGCGAATTGTTGGATTCTCTGA TGGAGCTCTTCTTGTTGTTCCGAGAGTTCATTAAAGAGACCGTCTACCCT GCTGATTGGATGTCAATGATGATGGTTCAAAATAAGTGAGGCTTCAcctt ttttgtctctttttgtttGCAGTGTTTTAAAGAGAACTGAATGTTGAAAG AATGATATTATTATCCTATCCTAATTCACCAACAAAAGCAGTTTCCCGAG GCTTATATTATAGAAAATATTAATCAACGAATGAGACTCATCCAACCATT ATATTCTGAATCAAAGCTCTCAAGAAATTATGAAACCTTTACGACCGTCG TCTGATATAATAAGACTAAGTTTCAACCGATAGATCCGATGGCTTTGCCG GTTTGTttcgattgaaaatttaacaataaccttttttttttcagtgtgaT ATTAGGGGCATTGCAGAAGTTTTCCGAGGTTTTATATGACCGCTTCCTCG TCGGNGAAAATTTAACaataaccttttttttttcagtgtgaTATTAGGGG CATTGCAGAAGTTTTCCGAGGTTTTATATGACCGCTTCCTCGTCGGTGAC AGCTTTCAATTTCAGGTGATCTAGAAAGTTTATTTAGATTGCTTCGTTGC TTTATTCAATAAAGTTGGGGTTTTTTCCAGACCTCAGAGTTTTTAGCACC AATTCAATTTTGTTCTTTAGATTTGGAGTACGTTTTTTCAACTGTCCGTC ATTTTCATCACGCAAGATTCGCTTCAGTTGGAATCTTTTTCGGAAGCTAA ACGAAGAAAAGTGTTTGAAAGGTAATTATGAAGCCAATCTATACATACAA TCTTAGCATTTTGTTGTAGAGAGTCTGGCCTCGATTTAAATATCGTTAAA CTGGATTTAACCATCCTTAGCATGTTAAAACCAGTCTAGTTTCATAGTTA CTCTACAAGAAAGTTATGTCTTATCCATCCAATGTTTTGTACACCACAGT GTCCCTCAAGCAGGATCGCGGATCAACCACCAATCTTTGATTTAGAATCA TTCATAAAGacttgttcttttgttttaggtATTCGGATATGCGAATCACA CTTGCCAAGCGTGTTTTTGATATGTGGCAATGGttgggtaaaaaaaaaat tttccttctttcttttgttgacATCAATTAGTTACTGGATtcttggattg tttaacagtttCACATCCTTTCTGAATAGGATGATgattttgatttgcat ttatcaTTGATGCCTAAAAATATGTGTGCTATTATCTGTTTTACTAGAGT ACTAACCAAATGTTGATCAATAACATGGGCAACACCGACTTTTAGTTCAC TCTTCTTCGTTTGATTATTTCTTCCTTTGATCCTCAAGTACCTATGATAT GTCAATACCTTTGATCGAATAAACCATTTTCATTGTTCAGGAATCAACAA GATTCGCCTCATCCAAAGCATGGTGAAACCATTCCTGGAAATGACACTAG TACCAGAAACTGATCTCCGTAAAATCACTCTCCCCATTTTCTTTGATATG ATCGAATGTGAATTCAAAAATCGACAACATTTCAAACAGGTAATGTTTCC ATAACTTACCATCGCTCATACattgaaagattttattttatttataagaa tatgttttggttttctttaaaatcatttttattcgGTTGGCAGGTTGAAT CAGAATTGATTATGCATTTGGACACGCTGATTGAAAGTGGTCTTAAAGGC GACGAAGAATACAAAGAACTCTTCCAACAAATGTAAGATGTTCGCATGTT TTTCTTGTTACTAGTCAGTCAGACACTCGCAGAAAGACACTTTACATTTT TAATTCCATCAGCAATTACATTAAGCTATGTATAAGAgagaaaaatttaa tggatTGAAACTTCGCCACTCGGTAGTCCATATTCAAAACGGGCAATATC GAAGGTTTCGGTTCCTAAAAGTTAAAAGACTCGTCGCGAAATATCCGACG CACATTTTGGTCACGCAAATTACAGAGATACGAATGCTTGCTAAAACATC TGACAGTAGTGTTGTAAGCTTTACTTGGTTCCCTATGTTTCATTTAGCTT GATGGATAAATTCAACCAACAACGCATATCATTTCCGAGGCTTTGTGAAG TAGGGTTGATTTTTGTGGAGACAATTTCTCGGTTGTTATCGAGGTTGCTC GATTATCGATCAGTCATTCAGTCGGAAGACAACATCAATAACCGAATGAA TTGCACTGTCAATATCTTGGTGAGTTTCTACCATATTATTGATTCATCTC TGGGTTTGGTGAAGTAAATCCATAAAATCCTCCCATGATCTGAAATGTGG ATTTGGATTGCTCCAAACCCAAGACACTGTTTGATGAATTTTAATGGTCT ATTTTCTGACTACTTTCATTTATGGGGCATTTATGTCATTTATGGCATTT ATAATATctataaaattgttttattcCTTGCGAAACGCCTTACAGATAGT TGAATCATAGGTCTGATTTACAAAATTATGGATCAATATTTTCTTAGAAT TTCTACCAAGAGATCAGGCGTGAAGACATGAAACAGAGATACCTTTACAA ATTATGTGACCTTCATCTCAGCCAACAAAACTTTACAGAGGCTGCGTTCA CTCTCCTTCAGCATGCAGAAATCTTGAAGGTATTCTTATTGCTTTATTAC TACAAGAAAGTTATCTGACGTCCCCACCTTTTGTATGCTTATCGGAAGAA TGATTGGAAGACCAAACTTTTCCGCCGAAAACGCCTATAAATCATAAAAC GCTAGAAGTAGAAAGAGATTTGGATTGGACTGTTTCAGTTAATATCCATA CACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020894TCONS_00020894Clytia hemisphaericatranscript
TCONS_00020895TCONS_00020895Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020895-proteinTCONS_00020895-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000373supercontigsc0000373:286578..296881 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.11 9.33 5.27 4.18 32 25.7 29.3 33.45 17.98 24.46 16.81 12.57 20.36 19.03 16.34 21.23 25.57 28.39 19.05 26.77 25.72 25.61 13.38 18.32 22.52 23.26 18.76 15.59 14.24 15.79