XLOC_011568 (gene) - C. hemisphaerica

Overview
NameXLOC_011568
Unique NameXLOC_011568
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000359:122624..128874+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011568 ID=XLOC_011568|Name=XLOC_011568|organism=Clytia hemisphaerica|type=gene|length=6251bp|location=Sequence derived from alignment at sc0000359:122624..128874+ (Clytia hemisphaerica)
CTTattgatatgcaccactggagagtcttctaagaatttttccacccaat
acgtcacttaaaaaatagaaacagTGAATTGAAtggaattttttgaaact
ttgtgaaTAGTGAACAGAGTTGAGTTCCTCTCCTCAAATCCGTTGACCAA
GTGTTATATTGCATTTCCAACTGTAGATGTAGAAATCTGTCCAGTTGAAT
CTAAAACACTCGTTTTATCAGTAAAAAAGGTTTTGGTCATATGATCCAAG
GATTTATTTACATGATTTCAATCCAATGTATATACAAGATGTCACATact
cctgttttttttttcagcacaaaaacaaaacaaacatgaTAAATCAGAAC
ATCTCCATCCAACCATGTTCACCACAGATAGGGTCATCGGAGGAACCGAA
CTATCCTACCAACGCTGCAATGACCAACACTGAGCCTCCACCTTCATCTT
CACTGGAGTCGAGCACTAAAGATTACCTTGCACCCACAACACCTGGTAAA
TATCATCATCTTCTCATTTTAGTGTGCAATCCAATGGGGATATTAACTTT
ACAAGTGATGGTCCCAAGCCAAAATTGTTTGAACACTTTTCAAAAGgtga
tttcaaagaaaaataattgttaGGGCTAAAGAGATCTCAAGGTGTAAGTG
TATTTTGGTGACCAAGAACTCTTTTCAAAAGCTGGTTTTAGAGAAAAATA
CCTCTCCTACAAGGTCATTATCATAAATAAGCTTTGACAACGTCATTAAA
AAAGTATTGGTTCGGCTAAAGAGATCTCAAAGTGTAAGTCTTCAAATAAG
AAACTATTTTTTTTGGTGACCAANTCGGCTAAAGAGATCTCAAGGTGTAA
GTTTTCCAAtaagaaacaattttttttggtgACCAAGTCTGAGCCAAATC
GATGAAAGGGGTTCTCGTTCTACTGAATTTATCTTTTAAACATTTCTCAA
GCTGACTCCAGGCTAAagagaattatttttttaatgagaCATTCTTCTTC
TCTTGATTGAGCCAGGGCTGCACCaatcagtagcgtagacaaggagCACA
acatttgtgtaggagagcagattttgcGCCCTCCTGTCTATGCTACTGCC
AATGAAATAGGTTTTCTATTCAAAGAGAAGTGAACCCACCGATCAAAAAA
ATCTACTATCCAACGATACTCTTTCTTAGTCGCACATTTCTATTTGGACA
GCGATGAAAAATATCCCCTCATACTTCTCATTTTAATCAAAAGTTACTTC
TTCTCTTTGTTATCCAGGACAGCCGCAACGTCCGTATATTGTGTCACGAC
AAAAGAAGAGTAGTACAACGAGTTACAACACGTCGCTTGATACTGATGAA
GACTTAGGAGGTGCTCTCGAAACGTCAAACGAGTATGAATACCGTTATCA
ACAAGCAAGGTNGGGAGGTGCTCTCGAAACTTCAAATGAGTATGAATACC
GTTATCAACAAGCAAGGTTCGTCAATTTCATTTGTCTGCTCAAATCACAA
CCACAAACCTTTCAATGTTTTGCTTTTCTGGCTTAATCTTAAGTATTGAT
ACACCCTTTAGATTATTGAACCAGTTATGTCACAAATATCTCTTTTCAAA
CTCTGGTGTCTAGATGGAGCTCTACTATCAATGACAATTTTGAATTTCAC
GATTGAATAGACAAGTGAACTCATGGTACGGACTAGATATGTATCAGGAC
ATATTTCTATGAGAAGGTTTCACAGACTGCTGTCTATGTCCTTGATTTTC
AGTTCTTGCCAAATCTTGGACGTTATAATTTATAAATGCAGCTGCATGTA
CAAAGTTTATGGAACTAAAGTTTATGTTTCGACttcaaaaattctctttt
tgtcGATAATATTATTTTCCTTTCCCCCTTATTTTCCCTAAAAAGTCTTT
CTGTTTCTCTTTccattcttttaaaatattgaaatcgtTAAATCTAGTTG
TGAGATATCTCTCTTTCtctcttcttctttttattttttatcatttcttc
ttcatcagacatattaatttttagatgttttttttttcgacttcaACTTT
TCACTCGCTCTCACTCTGACTTTTAATAATGTATTTAAGAATTTTGATCA
ATATTCTCTATGTTGGTTTTTTTAAGTCGAGCGAACAAACTTTttagaaa
gaagaagaaaagtgtTTAAGATGAAGTTTTTATAAAGATGGTTCTTTTGC
CTGTTCTTTTTGGATTTGGTTGAGAACTATGGGGCTTGACAGTCTGTTTT
CGTGTGTTAAGATTATctttataaccctgtctcagtgacctgATATGAGA
TAGATAGAGGACCTCGCTTATTTCGGAATTTGATTCACCAAGTTTCTAAA
GTTTTCACATACCTTatcggtcttaattattagtcggccctaattttagt
cacctcatcaaaatttagtcattaagggccgactaataattaagaccgac
taaaaatttgggcaatttctaactttacaagcagatggaacaggaaaaat
gtacgtacgcagaggaaattttttcatagcccttttttgctttatttttt
tacttttacgcttcttatacgcatcaaggaaaagaaaaagtttcttaata
aacatcgAGTTTTATGTATGAAATAAAAGTTCGAACCTAACGATTTGAAT
TCTAacttttcttcaaccgaggggggggTATTCACCTTTCCATTTTCAGC
ATAGTCATTATCAACGTGGAAGTTGTAGaggtttttcaggtttttccAAA
TAGCGACAAgctgccattatggattttggaTTTATGGATTTGTTTCGAAT
CACGAGTTATTGAGTCTTCTTTTAGATAATTAAAagtatttgcaaaaagt
ttgataaaaatcgttcaattttgtttgcaacatttcttttgtcttgagca
tgaaaaatgaaagatgTTTGAGCAAATAGGATTGGCATTTATATTGTGTT
GTGTTAATTGAGTCTTTGAATTTGCTTAGTTTGTGTGACGCTGAACGGGC
CCCGCTAATTTCGCCTcctcaaaattaaaaaagaaattgactatGATATT
TTCAAACTTCATGTATAATTTATACATATAAGTCTTTTTATTTCTCTTCC
TCGAAGGGAAATCTCTTTTCATCGGCCGGATAATCTTTTACTTTATtgta
aatgtaacaaaaaagggaaaatttgaaaatttcagattttgttTGGTCTA
CAGTACTTATTTTCGTTCCTCATTTCTTTGGATCCTCGAACTTTCTTAAG
CAATCAGAATCGCTCCTTATTTTCAAACTGGTAGTCGAAGTTTTACAATT
TTCGTGCAAATTATTAATATCTCGTGCTATAGTAACATGGCTCCGGTATA
TAAAGTTCATTTCGATGCACCCGAGGTCGTCAAGTTCGTGTAAGTTGTTC
TCTTTCAGTCTTTTCTCATCAACCCCCTCGTCAATGTTTTTGCGAAATAG
TTTGGGATTCGCAGAAACTTTGAACTGGAAATTTATATTGTATTTATTCT
AAACAAAAAGGGGGGGGGTCTCGGAACGTGTCGTTTAGTGATGTGGTGGT
TTACCCAAACAACTCAAAAATTCTTTTGGTACCATGTTATATTCGAATAC
TAAAAGGTGGTACCTAAACGAGACAATCTTTAGTACATTGGTACTAGTAT
TGTAACGGCCGGCTCCAAAAATATTGTTAACATAAAGTACGCAAATTTCG
AATATAGTTCCAATAAGAATAAAAGCGAGAAATAGCTTGGAAGTCTAACT
TCGTAATGAGTCAAGAAAATTCTCCTGTCCAACAAACATCAAACACACTG
ACCACCGCCCACGAGGAGGGCGTGAAGCGTTCTCATTCTGATTCCAAGCT
CGTTCTCCCATTGGTGGAAGACAACAAAGAAATTCCGTCGATTAGCAGTA
GTCATTCATATCCCGAGTCCTTTAATATTGAGGAGATAACAACACCAGTA
TCAGAATCACCACAAAATAATGGAGGTAAAAAGAAGCGGATGGAGACATT
CACAAACTTTATGGAGAAAATCCCGCTCAAACGCCCTTCAAATATCTCCC
TCCCTTTAACCACCTCGACACCCGCCCAATCATTGATAATGCTTGGTGAA
ACCAACGGGGCGTCAAGTGGGGCGTCACCTAATGGAGGGAATTTCCCTGA
ATTCCAGATCAACCTACATGCAGCTATTGATGAAGAACCTGTGTAAGTTT
TATGACAATGAAAGCTATCCCTAGTCCCCGCAAGCAAAACGTTCTGTTCA
atcatattcatgatatgcacgactgcaatgacttcacaaaattatgcaat
ttttctgcttttgttccacccaatacgtcactttttctattgtttaagtg
acgtattggtggaagttctcagaagactctccagtggtacatatcatgaa
taaccCTTCGCTGGGTGCTCTATGCTGATAGCTATAACGCATACTTTGGC
CGTGATTTTTCatctgattttttgtttttcttggtTCCCCTAAGTTCAAT
GCTTACTCAGCTGACACACAACATTCCttcgacgttcatctaacgttata
atGGACGTTGTAAACATTAGATATGTGCTAGCTGGCTGGGTATGAGAATC
ATTGTCCAAAACAAACACACTTTGGAATTTTTAAAGTATTTCGTTGCAAT
GATTGTCACTTATCTTATATATCATTGATAAGTTATTAAGACAGTTTCTA
CTAAATAGAAagttatcaattttttttacattatttaATCCAGGCTTTCA
tccatttgtttaaaaaaaaagtatgaGTCGATGTTTAGATGATCTTTAGC
CTGTGTATTCGTGGTGGGACGATCACATTAAAATGCTCTCTGAAGGAGGG
TGGGTTATCTCGAGCTTTTATCTTTATATGGCCAATCAAGATAACTCTCC
CTCGTTGAAGCGATAGATGTCGACTTGTCTACTAGACAATTTTAACCGCT
CGTTGAAGGGTATGGGAATGAAGTGTGGAGGTGACAGCGAAGCTCACTTA
CTTTGTTGAGTAATATGACAGGCTAGTGTGTTGAACTTTGGTTTTTAAGA
TGCAAGGCTAGTGGCTTTGACCCATTACTCTTATGGTATATTATATGATG
TGTTTTGGATTTGGATAACTGTTTAATTTCGTTGTGATTTCCACGACTTT
TTTAAGAGTTAAATTCCACTTTAACTAAGTTGTCGTATGAAGCAAGGTAC
AAATTGTACGATACAAGTGTCTCTTTGTGTTAGACTTCTTTCTACTATCT
AGATATGGATAATTTTTCTTTGCGTATTGTGCTATTGGTTAAGATAACTC
AATAGTCGAGAAAATTATCCCATTCCGAGAAATCTTCTAAAGACTGACCC
TCCCACCATAATCTGTTACTTCATATTTTATTAATCAAATCATTTCATTC
ATAAAGCGTTAATTTCCTTTGGCTAggttttccattttttataaCAAATA
GACATGACAGACAAAtcatttaaattgaaaataaattgtcTCGCGATGCA
CTTTCTTTCGTTATTACATGATTTGCATGATCTCATTAAAAATTTTCTCT
CTAATCAAAGATAACATCAAAACACGCTATACATTTTATATACAGTGGAA
ATTCTTTAACCCGAACCCAcggcgttctaaatctagacGCAGtgctcgaa
cctctataactcgaatgtctccataactcgaacaaattttactgtccatt
cagttaacaatgttaacaaaatcttacttcataactcgaaatttccttaa
ctcgaacaaatttgtttcCCTTGCTTGATCGAGGTATGGAGACACTACTC
AAAGGAGAtatcgagttatggagtaaggtttataaggcattgggcttttc
cagaaatagtccgtttcttttcaagtaaaaaatacgatatccaggggtaa
acctttataagagaggatatccagggggttgagcatatttttaagagtgg
atatccaggtgGTCTTTACTAGTAacgttcgatacttcgaaaaatcaata
tcctcaatttcctttttctggaaaagcccattgttaTCTAAAGGAACGAG
AAAATATGTTAGAGTTAAAGatacattcgagttaaagacgTCAGAGataa
agagactccactatGTTGAATTTAACTCCACTTTCTTTACTTCTCCAGTC
TGTCGGACAGTCAGACGCAACGTAACTTGCAAGACCGGCTGCAGATGCTA
AGTCCCAATCGCTTCAAgaagttgaagaagaaaaatagatTAACACAGGT
A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020597TCONS_00020597Clytia hemisphaericatranscript
TCONS_00020598TCONS_00020598Clytia hemisphaericatranscript
TCONS_00020599TCONS_00020599Clytia hemisphaericatranscript
TCONS_00020600TCONS_00020600Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020597-proteinTCONS_00020597-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:122624..128874 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.18	15.93	7.81	5.67	13.27	18.45	22.26	21.27	14.8	16.81	20.44	13.39	9.38	9.58	7.55	9.28	11.82	14.11	8.79	10.53	8.75	13.92	16.41	16.82	47.85	58.17	3.78	4.26	12.63	13.95