XLOC_011269 (gene) - C. hemisphaerica

Overview
NameXLOC_011269
Unique NameXLOC_011269
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:239501..243373+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011269 ID=XLOC_011269|Name=XLOC_011269|organism=Clytia hemisphaerica|type=gene|length=3873bp|location=Sequence derived from alignment at sc0000348:239501..243373+ (Clytia hemisphaerica)
CGATTTAATTTATAAGCTCATGAATATAATTGAATATAGGTGATCTATAG
CAGAATATAGGTAATCTAGCTAGTTCAACACAGAGATAATGAAATTTACC
TCGAAGTGGACTGAGGTGACTGGGAACCAACAAAACCAAGTCTTAACACG
GACACCTCAAGATTTAAACTACGGTGGCAATGCAATACGGTCATCTGTGT
GCGGTGGCAAGATCTGCTAGAGGGTTTTTTCTCGAGATAAAACCTATTTT
TAGAAAGGCTTACGCAATGAATTTTTCTCTTGGCCAATCAATTTTGCTGG
CGCGAGAGGCAAACAAACCAAAATGCTACCATAACAGTGAAAGTTTATTT
TGAAGAACAGGAAAAAGCTTTATGGTTTACAGTTTAGATTCTTTTatcca
cacacacacacactcaAATATCAACGAACCTGAACAACAGTTCAAAATAC
TAAAACAAAATGTCAAGAGAATAGTCCTCCAAAGGCAAAAGTTAAAGATG
TCTGGTTTTCGAATCAAGCTGTTCAGAAATGGTAAAAAAGATTCTGGTTT
GGTGAGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNacaagcaaaaaaaatttccataattatatttgactatcaaaagt
tacagacattcttgtttccactgccaattatatctggacagactttagat
tcTTTTATCCACACACACACACTCAAATATCAACGAACCTGAGCAACAGT
TCAAAATACTAAAACAAAATGTCAAGAGAATAGTCCTCCAAAGGCAAAAG
TTAAAGATGTCTGGTTTTCGAATCAAGCTGTTCAGAAATGGTAAAAAAGA
TTCTGGTTTGgtgagtttttttattttagttgtcttttatatattttgta
tttattcttTATAGCTATCCACCAGCTAGTCTCAGAGCTTACCAATTCTT
CAAGATTTCAAAAGCCTACACAGAGGAACTTTTTCATGATCTGTTTTCAT
CATCCTAggcgaccatcgaaaaattgttccgTAAAAATGCATACAGGCGA
ACAGGACCCTGccaacgcaccggactgtccggtgtatttgtctggtggca
aaaagtatcctttcgctacaccggacgcaagaagcgctacaccggacgca
agaagtccggtgtcagtccggtgttgcatacagggaattttggacgccgg
acatttatgaaacaaaaaattaagaaacaccggatgcactggactggtca
tgtccggtgttttgattgttcggtgggaaaaaatatccttctccaacacc
agacatccgacttccttaagtccggtgtagaaattgtccggtggtaaaaa
aaattctcattttacaccggactttcgcgtgtccggtgttcgttaagtcc
ggtgcgtcagcAGGGTCCTGGGCGAACGGGCGGTTGGAAAAATTCCCAAG
TTTTTTAAAATCACTTCTGTACCGTGAGTCCGAACATCCGACAGCCCTGc
ttaaatccgaccccccaaataactgctatgaaaaaaaattctatgtttac
aaacattccctctccaagttgaacaagaaactatattgcaagaactctcg
aatcaaaacatctaacaagatgactaaaatgtgaagatgtcaattaatgt
gataaaaaagtgtgagttgtaaaaataattacctttattattctgaatct
gttgctcgtgtttaaaacgttaacaattttgtaataaaaaaatatgcttt
GTATAAAGAAGCatttaatgttttggttcaattgattcagtgtatcaaat
ctctcagtttagttgacactttggtatcttcattgtgtcacagcaaaaag
tttgtttttattttagtttgtatctttgaaagaccccattggATTAAGGC
AGgcctgtcggatttaggaccactcatggTAAGTCGGGGGGAGGTGGTGA
CacgaacagaacaattttctgATAGCCGCCAGAGCAATCAAGAAAAAAGC
TAcggtgagtggtcctaaatcctacagccctgcctaattccgatcCCCCA
AATGTAAGGTTGGAAAGTTCAGCAAATCCCAAAaagaaattgcaattttt
gcctgaaaattagatttttttctctaaaaatattgtaaattgCATAGTTA
TCAAGTGTCTTGCATCCTGCAGGGCACGTACGACCTGTTGTCCCGCTGTA
TGCCCCCTAAAATCCCAAGCTGAATTTTGCGCTCGCTTTGTTTGCATCTG
ATCACGCATTCGGAATTTTGAAACTTGGCAACTATGGATTTGTATCAGTT
GCTTGGATTGCAATGTAGATTCTGTGGTTGAGAAGAGTCAATCATTTATT
CTGTCATGAAGAATATTGACAGTCCTCTATTGAGAACAAACAATTACACC
ATATTAAAGGAAGATAAAATGTGTTTTTATTTCACTCTCAATTTTAGGTG
ATTTCAATTCCTGAGTCTTATGAAAGTCTAGTAAATGTTGCATCCAATAA
ATTTGAGCAAAGaatatcaaaactttatttatCGGATGGATCATTAGTGA
CCACCATCAACCTCATCAGGTATCTTACTTCTAAAAGAATTTCACATTTT
GTGTCTGTCACGCTTAAATGGTAGGTAAACTGCAATTTTGAATGGTTTGT
CAGGGAGTTGATTCAACTATGAAAGAAGGATTTTGTGCAGTCTTTAAGAC
AAAAATcttattgtttttttgaaaagcaGTAGAATGATGAAATTCCCCTT
AAAGTCAAAGTTAAAGAACATCAACAAtaccatctttatcatcctaaggg
cttttgatgtgtaaGCTTTTGATAATAAGATAATAATTTCATCTTCAGAT
CTCCCTAATAACTCTGCTTGGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020049TCONS_00020049Clytia hemisphaericatranscript
TCONS_00020050TCONS_00020050Clytia hemisphaericatranscript
TCONS_00020051TCONS_00020051Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020049-proteinTCONS_00020049-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:239501..243373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.79	4.84	4.61	5	6.97	4.29	6.94	7.01	6.43	11.92	13.48	5.33	4.91	6.12	4.51	6.07	6.5	6.24	6.74	5.83	9.37	9.93	11.38	13.24	5.52	6.3	12.11	13.16	9.22	7.48