XLOC_011268 (gene) - C. hemisphaerica

Overview
NameXLOC_011268
Unique NameXLOC_011268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:232894..239216+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011268 ID=XLOC_011268|Name=XLOC_011268|organism=Clytia hemisphaerica|type=gene|length=6323bp|location=Sequence derived from alignment at sc0000348:232894..239216+ (Clytia hemisphaerica)
ATACGGTATCTATGGTCACTCCACAGCAAAGACATCAAAGGtttgaatta tttatttttcatgtgACAAAATCTCGGTATGTGTTTTAAGTTACAGTCCA TTATTGATTTGTTACTAAGTTTAGAAATGTCCCGGTCCGTTACCCAATCA TGAAGTAAATTATTTAATAAGTAATTGAACTGATttagtttttgaatatt tcgggaaactatttaaaaaatggaaaacagTTACATATAGTTCAgttata aaataatatttcttggGATTTATTCATGATGAGACGAAAATTGATTCTAA TCGCACTTTTTGTGTTAGGTAATGTTTGACCCTCTTTCTCACATTAAGAT GGTTGAAAAATACTTGTAAAAGGCAATTTTCATATAGGCTTTTCACTCTA ATTCGTACCtcttttatttgaatatttctgtaattcaacaaaaatattcG TCCACTAAGCTGTATAAAGTCTAGGAAATAGTCTCcgttttcgaatcttt ctttaattcgatgTCAATTCTTGGcaccttgaaaatcgaattaaggAGGG TCAATTTTAGTCCCAACATATATTGACATATATTGGTAGTATTACTGACT GAGTGTTTTAcctctttgtttgtttgttctaGTTTGTACCACCTTTGGTT CACCCATCATCTCCTCCAATCAGAATCAAAATGGAGATCATGGAGTTCTC CAACATAACAGGGAGCGTGATCAACACCAAATGGGTGAGatgaaaatcat tttaaaagtcCTTTATTTTTTACGAGTCTGTTAAGTGTCTTTCATGCAGG ATAACAATAAAATCgaacttttgaattttgttttatgGGTTCATTGTTAG ATAACAATGCAattgaacttttgaattttgCTTGTTTTGTGTTCATTGTT tctggtggtggtggtggtggtggtgactttctgtcaaaaatttacttttg agcttaatatttgttaaaaataaccatgaaagaaacattttagaagccaa aaatacaaaatttagtTTGCCTTACGAGTGTCTATACTGTCATAAGGCGT TCATCTCCCGTGcaatattttcattaaatgttATTTTCCCATAGAATTTC TTGCTAAAGAGAGGAGTGAAAAAGAACGAGTTGAGCTTGATATGATTATT GCCAAACCGAAACCTTTCTTTCACCACCGAGGGAAACGAGCAACCTTGGT TGATGAACGATACATGTGGCCTAACAACACCGTTCCATATGTCTTTGACA CAGTGAACCCTGTCAGTAAGTGATTTACAACAAATCTCCCTTCAACCAAA TTAGTATTATCTTAGCGTCAGTTGTGGATCATTGAATCGCaaaattaaaa ctttacaaatagttgAGTGTACAAACTTTAAGCCACCAAGGAGCAAGGCA TAAAGATACCTGGAAGTCGTTCCCAATCGGGAAGAAGCTGTCATTCTATT GGTCCTAATACTATTGACTTGTATTTGCATTTGCATTTGAATTTTATCGT TCTACTCTACATGATACAAACAGGGCGTATGTATGTGAGTGTTTTTGAAT AAATCGTAATTCCGTCTTCTTTAGACGAAGAGTTGCGAAACTTGACCATC GCTGCAGTGCACCACATCGAAAAATATTCCTGCATTCGATTCAAAGAACT CACTGATGAAGGTTATTACGTTAACATCACCAATTCTGGCCCTGGGTAAG TTTATTGTTCATTCTAAACACTTAGTAAATTTGCTTAAAAGCTTTATTGG GAGATACTAaactacacgtctttttttttttaagaagcacacttttaaga aacatgaggctcagaatgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNaaagtttagaaacatgtaagaaacatttaag gctcaaaaggccgatttcttaagaaacattgaggctgcttggtaaaacta gtttcttaaaaaaaaaaacgtgtagacttGAATAGGCTACCTGGGCAGGT AATCTCACAACCGATGAGAGTTAAATCTCCTGTATAAGAGAAACAAATAC AGTTGACgatctctaattcgacgttctactattcgataggctcccttatt cgatgaaatttaaagtccccgtcaacaagaaactctcataaacgacgcgc ccttattcgataagctctctttttcgatgaaaatccaattccccttgaag atcgaattagagagcgtcaactgtaatacAACgggaaaaagaaacttttt gaggCCCCTTTTTCTGTTTGAATGAGAATAGCCAACCTGCTTTTTTGGAG AGTAATAtctaagtgttttttttttttgaaatcagaTGCTCGAGAACTTA TCATTTGACCCATggatttttcgtaattttttcatcgggttctttgaaat tttgccaacCCATTTCTCACTAAACATCGAATTCATTCATAATATTAGgt aaaaaattttgcttgaGCCCTATTTCCAAAACATCCTTATTGTGTTAAAC CCATCTCGGAAAATTCCTTTCCTGCAGAAATGACGGTGACCATTTATTTC aactttctaaattttcagttgttACTCTTACCTCGGATTTATAAACTATG GACCAGCAGAATATGGTCAAACCTTAAACCTTGCTGATGATTGTAATGGC ATGGAGGTCACCATCCATGAATTTCTCCACGCTTTGGGGTACTATCATGA ACATAGTCGACCCGATCGATCGGATTATATCACGCTCAATATGAGTAATA TACTTCCAGGTAAGAATACCTAAGAAATCTTTTCATTTCCCTTCCAAATA AGTACGAATACGAGATTACAAGCTTCCGACGATGGGAATGAAATTTCTCA CATTTCAcgattaaaacattttcaataaaagcTACAGGACATCGAATAAT ATTAAGCAGAATGTGAAATGTGAGGAGATGCAAAGAATCTCTATCCAACT GTCTCCCGCCATCAGAAGATTGGGTGGAAGAGCAGCATATTCATTTCATC CTTATTTCGGGATTTTCCAGCACTGCTTACTGAATTTAGACCATTCCACA GGTAACCGTTCCGTTTCGCTCTGATATGAAataaagccattctattggtt ggAAGTCAAATTTGCTTCGTTTCAAACCATAGCTCTTAGTATATTCTTAC ACAAGACATAATGACAAATGTTTTACCATTTCAGGAATGGAAACGCAATT CACCAAGGTTAATTTAACACACGGTGATGAAGCAGGACCGGTGACTTTGC AAAACATTTCTTACGATATCATGAGCATCATGCACTACGGACAGTAAGTG CAAACAATTgataaattcgtaatttgatgGTTTGATGTACGTCCATCGTT TCGTAGTAcactgtgcgcattgtctgtttgatagaAAGATTCTCTCCTCT CCCCCCCTCTCTCACCCGCACTCCATCGCAAATATCCCTTGGATGTTAAC AAATAGGAAACTCCAAAATCATATTTGCCATAGCTTCGAAATTAGGAATG GGCTTGCTGATATAAGTTGGGAAGTTGGGTGAAGCTTAAAATTTGTAAGA TTAAAGATTCGACACATTAACACGTTATCCTGTTGTTTTTTTAAGTCCTt cgctttaaaggttttgtttttgaataagagtgatatcgtttgcttactca tcaacttTAATCCACAAGCTTTTTgccattggattgacacggatgcgaag caagattagtcagaaagaggaaaagaaaaacagctttttgcttatatcag cataatataacaataggcagacactatcctgatatgaaatatgtgtctga tatgaaacgggaacacttatgtaaaaataaaacgttCAAGTACGCACTCT GTTTGCCATTATATGGAAACCACTTTCAAGGGAATCGCCATATTTACACT ATGTCTTTTCATATCGTAGCAGAGAATATGCACTAAAGCGAATGTCCTTA ATTCTTCTGTTGATTAGGTATGCGTTCACCAAGCACCAACAATTGACATA CGGACGACAAGACCAAATGACAATGTATTCAAATGATGATTATATGGCGC AACTGGGCGGTTATTCTCTCTCCGAGAAAGACATCATCCGACTGAACACT AAATACAACTGCAATGTCAACATCACTGAACTTGTTTTGATGAAGAAGGC GGAAGATGGCGGGAATGGTGGTGCAGAGGGTAAGACATTCCTAAACAATT ATGTGCTttgaaatctttgaacaaaaaaGAGTTGCGTTTTCATTCATTTA CTAGTCATTCACTGTTGTTATTAAAACTCCCCCTTCTCATAGAATCGGTG TGACCCGCTCCAACGGGAAAAAGTTTTCCCtgctgaaaataattaaataa aaaaatcctcaTGACAAAATATTGTACTATTatttcaaatccccagccag gCATAACAAAAGATGGGAATACCAATCCTGATCGCGTTTCAgcccgttat ttttacccccagtTGCTGAAAATATCATagcaggtctgtgagaaggtaGT GTGTGAAAAAGGGGCGTGTCAAAGCTTCTTTTAAACGAAATAATATTCAA AGAAATTCGAACTCTGCTCGCGCGTAGAATCACAAATAAGGCTAAGAAAC TTTGGTCATCATGTCTATCCATCGCTTGTAGAAAATTGAGTTTCATGCAC GCCAATAATAAATactttgtttaaaaaatctatgttttttttcgaaagga gGAGCAACTGAAACTACAACTACAGCAATGCCAGAAGCTTCACAGCCACC AACTCAAACATCGACCAGCGCCGCGGTCTCCAGTGAAAGTTTGTCGGGCA CCACTATCACAACAGAAACAATCAGCGAAAACAACATTTCCACCAATGAC CACTGGACCAGTACGACTGAAGCACCACAATCAACATCCACTTCAAGTAA TGAGGGAATAGAAACTAACACCACGATTGCGACGGAGCCCGAagacacaa caacaacaaccatgGCACCAACAACCACAACTTTCAATACATCATCACTT AACTTCACACTACCGGCTAACACATCAGCAGAAGATTTCTTTGGTACAAA CACTAGCAACTGGGGAAGTGACGCAAACCACTACAAGTCATCCATGCTAC ACACGCTTTTCTCTATGTCCTTCATCGCCATTTGCACTTTTGCTTTATTT TAACATCTTTAAACACGAATATAAAATTCAGGTGAAAATTCGAGAAGCCT GAATCTACCAACGACCATTTGGTTCGAAACTCGTCAGTTTcttacccaga gccacttgaTTTTTctgatggacgtgatacaatCCTTTTGGTAACGCCAT CagaattatcaaaaagtgagcTAAGGGACTGGATACAAAACTGTATGTTA AATTTTAATTGAGACAAGGATATATCGGTCAATGATCGAATCATCGGAAT ACATTTAAAAAATGGTTGTCCCAATGAAAACGAAAGACACTGGAACCACA CGCCATTTTTGAATGTCTTGGcaaaaaaatgtgtaacaaTAACAAACATT CTTGTGGATGTCGTAAAAAAGATGCCTGAAAGATTTTGGATTATCTCTGA AAAtggaatttttgcaattttccttTGAAACTCTTTTCTCTCTACAGGGT GTGGTCGGACAAAAATTATCCTACTTGCAGAGCAACCAGTgtcatagaaa ttttatttctctttttgtttattgCGCTGGAACTCTCGTCATAAGTGCTC CCACTAGTGGGCCCATTAGACACTTTTCTCATGTCAGATACATAATGCAT TCAACAAAAATTCGTCTGTCGTTAGTTTTTCATTGTAAAATAgataaaat ttaacttttttcctCCAGCTAAGCACCCCAGTGGACTTCACACAATCatg caaatttttttcccaaattcatgTATTAACGCaatgttttttttgcaata cactcttctcgagatgcataaatttattgttgtcctcgttttcaaacaga tttcattgctatgaaattatacatttaaaccaatttaaattcccaaaagg cagccattaactctaaaacaaaagtgcttgaaattcaaaatgtctcatga ggtgtaaacaacacacttatcattgtgaatatgtaattttatagcaatga aatctgtttgaaaacgaggacaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020047TCONS_00020047Clytia hemisphaericatranscript
TCONS_00020048TCONS_00020048Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020048-proteinTCONS_00020048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:232894..239216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0.05 0.06 0.17 0.44 0.22 0.23 0.28 0.39 0.59 0.32 0.34 8.32 7.48 0.12 0.07 0.32 0.42 12.51 7.61 3.16 2.98 1.55 2.67 5.95 15.07 0.3 0.15 0.06 0.04