XLOC_011221 (gene) - C. hemisphaerica

Overview
NameXLOC_011221
Unique NameXLOC_011221
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000345:231104..235287+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011221 ID=XLOC_011221|Name=XLOC_011221|organism=Clytia hemisphaerica|type=gene|length=4184bp|location=Sequence derived from alignment at sc0000345:231104..235287+ (Clytia hemisphaerica)
TAAAAAAAGTTCTCTTCTGAAAAATGCATTTTATTTATACAAACCCATAT TGTGAAGCTAAACATTATGGTCAAACAATCttttaatttatgcaataaat TAACGGAAACAATAAACCTTTTAAACAAGAACCAATCATCGATTGCTATT CAACCGTATTTAATTGTCTATAAACCAGCCAATCAGAGTAAACCTTTCCC ACAAGCTTTTCGGCTTATTAATTGCTGTGTTGTTAAAAAACTTAACAACC TGCACGCGCCGTTTAaaaatgaaccaatcagaagGAAGCATTCACACGCT TCCCATGAAACGTAAAACTATCGCTTCCaacttttgacgtttttgtgACA ACTCTGGAAATTCTTTCCCACGGTAGAACAATAGGCTGATTCAATATAAG GCACGCGCGATGGGGTGAATAGCTCAACATATAAAACCATCAATTTACTT TTTGATGTGCAATTGATATAATCACTCAGTCGCGTACAGCCACCACAGTG TACTTACCGTACCATCGCAAATTTTCACggaatattttcataaatttatt tttcatttttttcgaaCGTCGAATTTTTCTTACCGAAGATGACAGCTATG ATGCACCCACTGAAAGAAAAGAGAAGGGTAAGaacgaactttttttcgcg TAAATTTTTGCGATAATTAATTTTGTTAGTACTGTattattttgtgaatt ttttacttggaatttttcacttttcatggAATATCACAATAAATGAAATA AGGGATTATATGCCCTTTATGctataaaaaataatattttactaTGTACT GTAGTCTTCTTTACGACGATGCTCCAAAACCTAATTTGCAATTATAAAAA AGTCTAATAATTATGAACCAAATCgttatatcttttttttctcttgcACA CAGGCTAACAAACCATTATTGGAACGCAAACGCCGTGCCCGTATCAATGA CAGTTTGACGGACCTGAAACACATCGTCCTCTCCTCACTCAACAAAGATG TTTCAAAATATACGAAGATGGAGAAAGTGGATATTCTAGACATGACCGTT CGCTTTCTGAAAGGAAGACATCATCTTGATCACCGTCAAGGTAATTGATT TATTACAATCTTTCCAAATACGCAATTCGTATTATTTTAAGGTCTTGTTT GAGGCGAAGGCAAAGGTCTTTCGTTTTCCAAGCTGCTACAAactgacacc cctgtctctttacTTATTTAGCGGTTATGCTTGAATCTCATAATGAGACA GGGGTCAGCTCTTTCTGCAAACTTAAGTTTGATGGAGAGCTGAAAGCATT ATACTGTGTGCATTGTCAGATTTCCAACTTATCCTCAAACTGCGAGACAG GGAGACCGGGTTACTCTTTTGAGATTTAAAGGACTAGAGCTGATTTCTGT TTTCCGCAAGTAAGTGGCAAGATGATGAATAcatataaattattttcaat cattTATCTCAATTATTTTGGTGACTACATAAAAAGTGTTTTATTgagct caaaatatttttttttatgtacCTCCTACCAGTATATCAAAAAAACGTTT GACTTGACATTTTGACAATAGATGGAGGGTGTATTCATTAAAAATGCCTT CAAATGCCTTGTATACCGTTAGAGACAGGGTGCTATTCTATctccttttg ttttgatagattAATAAGCCATAATGAATGATTAATACCATCACTTCAAA TAGAATTTAGATCAAAAAATAGTTTAGAAAAAATAGATGATCATTCAAAA GAACAGCATGATGAATTAAtaagattaaaaactttttttcccaTGGGTCT GCACTCGCTTAGCAGGCGAAAGAATTTCTCAATatgcaaaataaaataaa aataaacttttttcaaaatttttgatcctGTGATGCAAGTCATAACaagg tgtattttacagaacaacGGGGGAGAACGTGTTTAACCTCACTATTGACT ATATTTGGGCATTATAAACACTCCGTCCTGAAGTGTTCTCAAGGGCCATG AGAAAATCTTAATTCGCAATTATACGTTAAAAGAACTTTAAGATGTGTGA CTCTAGTAAATcgctttaaaaacttttttttataagaagatcgttctttt ttaagaaaaattccCACGTATAATTAATAGGAGCACTTAAATTCTAAATT aaagccccgggggggggggtactagggttggtgaatgaggggTATGTGCG GACGGGACCTCcgaaaaccgacccttagagagaccaaattttagtgaaaa agtgacccttagagagactttttcgaaaaattttccctaattttcaaaaa tatcctacccttagtgagacttttttgtaattttttctctcaaaatcaaa atttttttctaaaaatcgtgatttttcccatccttagagagactactttg aaatttcctgatttttgtaacccttagagagactttgaaaggtgaaaaac ccgacccttccCGTCCGCCCATACCCagtacctatttttgcctaagaacc ccccccccccgggattaaaGCACAGATAGATTTTCTCATATATTAAAAGT AAAAATCCTTGCCTTGAATATTTTGCAGTcagcttttttctttcttataa aaaaggtcaTAATGCTAACTTAAGTCCAATGAATGAGGTCGAAATGCATG AGAAGAAATGCATGGGAAAATTTGATCAAGCAAtcaagaaatgaaaacaa aacgGTTACATGTTTGTGTAATGATCAACATATTTTAGCGCGTGCGCAAA GCGAAGATCGAATTTCAATTTCCTTAACAAGTCAACTTGTCACTTTGCCA TCTTTCATAAGAACATATTTAATGTCAGATTTAAACAGCAGAATGTTCGg ataatgttcttaactttgtaaaggttcttataaaacagTGACAACAAATA TAGCAATAGAGAAGCCAAACATAGAGTTTATACCATGAGAAGAAAATGGT AACTtgagatttatttattttgtcaaGAGGCCGCCTCTCTTGACCGGCGA ACGTTATCTTCAGTCTTTTTTCTCATCACATAAAGATTAATATGATGATG TAATCATCTATTTATAAATCCATCAACACTTCTAAAAAGCAATCGAAATT ATCAGACACCATCCTGGTCTCCAAATTtctaaattgaaactttctcaACA TTTGTATAGAATTAaaactttaaccaaaatttaaaaaaatcaacctAAAA TCAACCCCGGATATCCAACCAAAAACTTTCCCTGTCTCGCTGTCTCAAAG TCAGGTTTCGTCGTTTCTAAGACTCCCTAGACATTGACTGTTAAGTATAC AGACATTGAGAAGACTTTGAAAATAACCCTTCTTTACTTTTCTCGTTCTT TTCAGACAGCACCACAGCTTACCGTACCGGTTATCAAGAAAGTACCAAGA ATGTTTATCAATCAATCATGACCATGGAAGGTATTGATCACAACATCAAA TGTCGCATCCTTTCCAACCTCGCAAATTCGCAACGTCAAGATATTAAACA CTCCCCACCACCAAGTCCTACCATTTCTGAAGGTTCCATACCACCCAGCC CACCCTTAACGCTATACAACCCGCCCTCCAGTCATCATTATTCAACGCCA AGCCCACCCATGAACACACGTCTTATTCACCCATCAATGGCGCCCACTTT ACCGCCACTCATCAGAAAACCCGCCCAACAACCAAATATGCAAGAACTTC CGCCCTCAACACAGAACATGGAGAAAACAGCCGTCTGGCGGCCGTGGTAA ATTGTTTATGACATATTCtctaataatttatttttgaagaatttttgttt ttgtgagcTTGGGGAGACGTAAATGTAAGACATTTCTATCATGATATATC ATGGATCTGAACctgaacattttttaaatttgttgcgagtttatttttgc ctgtcaactgatttttataaaaaagcccTTGAGAAAAAGTCCTTCCCCAa gtatttgataattttttatctcaTTTATACATAGTTTGTATATAGATGTT TGTAATATAGATGAAGAAAATAGAGATTATGAAAAAAcgttttatatatt atatatattttgcaATTCTTTTGTACAGGATCCTTGTGTATATTATTgat atattattatattatatattttttgacttgttACATAGTTTACATTTTTC AGTTATGTTATTATGTTTTACTGATGAAcgagtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019977TCONS_00019977Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019977-proteinTCONS_00019977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:231104..235287 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HELThairy and enhancer of split-related protein HELT isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.17 0 0 1.33 1.39 19.24 20.41 14.35 6.44 6.95 9.03 12.37 9.62 9.35 12.03 11.68 13.32 10.01 8.81 19.32 18.35 7.65 5.32 7.41 9.2 1.61 1.6 3.82 3.79