XLOC_011194 (gene) - C. hemisphaerica

Overview
NameXLOC_011194
Unique NameXLOC_011194
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000339:301513..306711+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011194 ID=XLOC_011194|Name=XLOC_011194|organism=Clytia hemisphaerica|type=gene|length=5199bp|location=Sequence derived from alignment at sc0000339:301513..306711+ (Clytia hemisphaerica)
NNGACGACCCCGAATCTGAAATCATCGAAAAGAAGAAATCAGACGGTACC ATCATCCGCGTGCGTCGTCGCGCGGTCAATGTGCACGTCCGCAAGCCCGC TCATACGCGCGTCACTATTTCGAGTCACCCTGTACGAAGACCCTCAAATG AAGACGCTGATTTGAGTTATGAAGAAATCCCTGTCGATGAGAATAGCCCT GTGCATTTTGATAAGAATGTAAGATGTTCACCTTACCGTCTagaaaagat tttgctttgaaTTTCACCATGGAAATGAAAACTTTCTTTGTCAGAGCTAT TCACGCTTCTCAAGAATACTTTAATAATCTTTCTTTGCAATTTTGACCTA AAAATATGTAGTGATTATTGTTCACTTTATAAACTAAATATGGCCTTCTT TTAGATCTGGGAAGAATACGACAAAGTGATGCCCGACGGAACCACGAAGA AATACCGACGTCGTTACATTTCTAAGTGCAACGTAATCTTGAAGAAACCA TCGTTCCGCGCTGAACCGACTCCAGTTGAAACGTCTTCCAATTTGTCCAG TGACGTCAAATATGAAGAGGTGGAAATCGGACCTGACGACGAACAAGACT TCAACAAGGACGTAAGTTAActcctgttttctttttctccaTCAGTGATC TTCCAATCTGTATTTTCTTCAGTCTAAATTTTAGACTTCGGTAATTTATA TGAGTAATGGAGACGAGAGttgaaattgtaaatttttaccATAGGACTGG GAAGTGATCGAGAAAGAACAACCAGACGGCACAAAGAAGCGTTTCCGTCG TCGCGTCATCACAACTACCGTTATGACGACGTATACTACTACGCGTTACG TCATCAATGCCGACGGAGAGGAAGATAACATGATGGAGAGCAAACCCATC GAAACGACTACCCTGACGTTTGTGGATGGCAAACCTGTCGCCACGTACGA TGAACTTCCTTTATCTCCTGTTTCTCCTGCTAAGACCAGTTTctttaaca aatattttattttttctattttcgcaCTTTCTTCTTGATAATGTAATGTT AATTTATTTTCTGCACTTTGATAGGAGTTCACAAGATGGATTGGATGAGT CGTTAAGTCCAGTTGAAATGAGTATGAGTATGGACGACCTTATCAGTAAA ATCAAGTAATTATCCATTCAttacattcattcattcattataCACAAACA TTTCCCCATTTCGTTTTATGTTCTAACTACCACCTCTATAATGCATACAC ACCGTTATCCCTTACTAATACATACACATTATAACCCAAGTAGAATTCTT GCCTAGTCAGTAAGACATTTGCTAATCAAACTATTTTATTGCAGTCAAAT GTCCACCAGTCTGGAACAGCCGGCCCCTGAAAAACCGGCTCCAAAGAAGA ACGTGGTCACTATCGAGACCATCACCCCGGCAACGACATTTGTTGTCGAA AGCGCGCCTTATGACGAGGAAGAAGCGCGAAAACGACAAGAAGAGGAACG ATTGGAACAAGAAGGGTTGAACGCAACCATCGATTCCATTTTCACCCTTC CAGATGATGACGAAGTTCGACCTCTCTCCTCACGTACGTCCCTTTAAGTT TATCAACgactaaaaaaataaacatcCGATTGGTTTGTTAGAATCATGTA TCGCCGATAATTCATTTTGACAATACCTTGTGTTTTACTTGACGTTTAAT AACTGCTTCTTTTGGGTTGAATTTTTGCAATAGAGATATTAATTAAATCG TAAATATCAAATGTGTAGGTACAgatgagtctccataactcgaataagCA CGGGTGGCACAAACTTGTTCGAGATAAGGGAGTCACgtagtaaggtttat aaggcattgttaattgAAGGTACGAAAAAGCTCGTTCGAGTTAAGAGACA TTTAAGTttaagagactctactgtatataCAACATCTTAACACGTTTTGA TTTTCCACCACAGGACGAAGCACGTACGACGAAGACGCTTACAACGAATC GTTCGACCACGAACTCGAAGAATACGGCGTCGAAGCTTTCCCCGATAACA CCACGGTATGTGgagatttttcatgttttgttagCTTCGCATCATTTCTC CCCTTCTTATGGGCTTATACGTTGAGAACCTTTCCTTTTACCTCCACGCA CTGCGGCTGACCTTCCAGTCAGGACTGCTTTATTTTGAACATCTCGGACC TCTACAAATCCCCCTTAATTTTAATTTCAGGCGGAGACTGACGGCATCGA TATCAACCTTCCGGATCCGACCGTTCgcaaaaagaaaccaaaaacggCAC CTAAACCGCGACGTCCGGAAAGTTTCGTGAAGATGACACCGACGCCGAGA AGTAGCGGGAGTGAGAGTGACGATCACAGGTATTTATGAAGAGAAGaaga aagacaggagacagaCTGACTAATCTTTCATAATGTTTGTTCGCTTTTCa tgattcattcattcatttcttCGAAAAATCCATTCATTCACCATTACATT TATTCATTTACATTACATTTATCATATACTTCTGTTCAAATTCATTGACt cgaaaatcaaaacataaatacCATACGATTTTTAAATGAATTATAAAGAT TTGAATGTATCTAAACATATAATTTCGTAAAATGCACTtaaaataatatc tttcttGCACCTTCAATTTTCCTTGGAGAGAATCTTAGggatttgttatt gtttttgacGAGATTTTTGTGCGAATGTTTAGAATGAATCGAACGAAGAG CGACGCCAGCAACGAACAAAGAGATTATCGACCTCATTCGCAAGCCGGTG ATTCTGAGATCATTTATACGGTCACTGATGTCTCAATGGTGGAGCAAGGT GCTGGTGGATTCGTCAAAGCCGTCAAAGGTATCTTTCTCACAAGTATTGT TTTGATACTTGACGTTCTTCACAGAAACAGTATCTAAATAATGTATAAAA GCGATTCAAAATAAATCGACGATATTTCATTGCTGACCTCAAGATTTCAA AATGGAATTTTGTTACTGAAGAAACTTGTAAACAATCTTTTTTCGTTTCA GCGAAACACGAAAATTTGGCTCACGAAGAACAATCACCGCCAACGACACC AAAAGGACATGTGCCGACGCGCACCATTTCTTTCGATGAGAACGATACTG CAAATGTCATCAAAACAACCGAGCCTCCCTCGGTACCGGTAGAAGTGACC ACCATCATTCCTGCGGAATCCGAACTCCCAATCGAAGATGTCATCTTTGA AACGAACCAAGTAAGCTTTCACATTTCATTCTTAGCGAACAAAATTCATT TTCCAATATTAATATGTTATTCCTTTAAATCCGTTTATATATAGCTGTAA AACGAGTGTTTTTACCAACAATTATAAATGTTATGATATTTTCTCCACCT CTTCTCATGATCAGCCTCAAGAAGAATCCTTCCCTGATATGGAGGAGAAC ATCGAAGCAATGGAAGTTCCCGAAGTCGAAACCGAAGTCATCCTCATCAA ACAAGTTTCCAACGAAGATGTCCGTGTCGGTGAGATACTCTCCTTTCTTT TTTTAACGTTCTGGGATTCATTAGTCATGATCAAATTCAGTTGTGCGTTA GGTTGGTTAACTTAATCAATCTCTCCTTTACCGTTTCAGCACCACCGAAC AGCGAGCCGGGAGTTGTTCGCACACGACCCTTCAGTTTACCGCGACAGGA CACTCAAGTCATCAAGACGGAGATTATCGAGGTGGATCTGACGCCATCTC AGATGGAGAGCTTCACAGAAGACGAAGGAGACTTTGTTGTGAACACAGAA CAACTACCAACGGAAGTCATTACCAAAACAATCACCATCGAAGGTGACTC CACCGAATTCACGCAAGAAGAAATCCAGAAATTGTTGAGCCAGGCTCCTG AACAAGTCGGCGACATCGGAAGCATCACCTCCACACAAGTCGTCCGAGTA AGATTAACAAATCTCCTGCTCTAGAGATAGAcaaattgtttttcaaagtt ttatttgattattttaaaaGTTTAGTCTAACAAAAACCTACTTTTCCTCA GCGTGAGGTATTCTACAATATTTTGTACGATTATCATTCTAATATGCACA CACTTCCCAATCCCCCGTTTGCACACATACACAATTAACTATTTGCTAAC TAACCTCTCTCTCACCACACAACAGACGACCACATTTCAGAAGACAATCA CTGGTAAAACTATCACCGTTTCTGGAGACGCTGAAGATGACGAACTTCAA AGGGTATGTGAACTAATCACTCAATCTACTTACCAACACATGCTATTAAT ATGCACATTCAAAAGCATTCACTTTGATAATCCTTTCAGAGAGAGACTTC TTTACACTTACCGTCCTCATTTTGAAAGTGTGGTTGCCAAGATTTTATTT GACATTCTATCCTGATTATCTTGCAAGTCTCCACTGCAGATTATATATTA AGGCAGACTTAAATAGGCTTTGAAGTTTGCACTTTTCTCTTTAGGGATTA ATTATTTGATGCCTAAATGTCGGTTGAAGGGATTAGtgtatttgaaaaaa taggcCTATGCAAACTTCGTTTGCCTCAAACATAATCCTCTTCACGTTTT AGATGTTGCGTGAAGCAGTCACGTCAGAGACGAATCAGATGGTGACGACA GATGAGGATGGCAACGTCATCATCACAGCCATTCAAGATGAAATCGTAGA AGTGGATGATGACGGTGATGATACTGAAGTCTAATTTACCGAACGAATGA AGTTTACCGAACCATATTTTTATTGTAACTTATTTTAAcgattttagttt ttatttactTAGGACTGAGGATTATTTTTAACTTAGAAGTATTTgacctt ttttatattttacgcTGAAATCTGTCACTGACATGGACTAGGAGTTTTAC CAAATGCCTCCCAAGTCAACCAAGTTGCACAGTCTTCTGCGTCGGATAAT TTATTTGCCACattattttatcataatttgtAACGCATAACATATtcact tcttttttatttaaaataaactTGCATACTTTGGAAGTTTTAATCGTGTT AATTCATTTCAGAAGGAACTGGTTTAAATACTAATAAATTGGggtcttcc agaaaatgtccgtacatgggggttggaggatatagtgttcaggggtagtg aaaaatctataaatttgccttgtccgggagTAAACATGCTCTTTTTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019941TCONS_00019941Clytia hemisphaericatranscript
TCONS_00019942TCONS_00019942Clytia hemisphaericatranscript
TCONS_00019943TCONS_00019943Clytia hemisphaericatranscript
TCONS_00019944TCONS_00019944Clytia hemisphaericatranscript
TCONS_00019945TCONS_00019945Clytia hemisphaericatranscript
TCONS_00019946TCONS_00019946Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019941-proteinTCONS_00019941-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:301513..306711 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.71 18.4 17.84 17.54 364.8 278.55 229.71 245.71 114.73 125.06 76.39 78.11 56.5 48.82 45.76 60.34 75.36 83.63 70.8 129.37 53.32 52.61 55.4 57.71 69.44 72.79 66.15 67.11 59.46 67.2