XLOC_011074 (gene) - C. hemisphaerica

Overview
NameXLOC_011074
Unique NameXLOC_011074
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000333:117016..120653-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011074 ID=XLOC_011074|Name=XLOC_011074|organism=Clytia hemisphaerica|type=gene|length=3638bp|location=Sequence derived from alignment at sc0000333:117016..120653- (Clytia hemisphaerica)
AAACCATAAACCACGTGATCTACAATAGTGGATTTCATTGGTTTAGAAAA TTCAACAACCAATCAAATTCGATCATGTGCACTACATAAACTGCACCTTG ATCTTCCATTCCTCATTCGTTCTTCGCAAGGAAGTACAGGCGAACCGTTA CGTCGCAAAGTATATCCCTGACTAAGTTTATCCACTTTTCAAAACTTTTC TTCTTTGATAACAAATCTCAATCAACATGGTAAGTCCATCAGTTTTTTTC AGCCTTTTTGCCTACAGTTTGGATCACTTCTACACAGGCCACAACTGACT TATCTTTGTAGACTCCTATCCTACAGATTTTAATCGTTTCTAATCGCTAA AGAAATTGCTTCATACCTAATCAAACTTCCCGTGATTTTTTTTTTGCTTT GTTGTGGTCAAAATTCTTAGAATTCTACTAGACAATGCAGTGTCTTCATT TTCATGGTGTTTAACTCGTCATGTGTCGTAACGTTTCGTTTTGTTATGAA GACATTGCATTGCTTGATTTCAAATGGGGGAGTGTGCCTTGTCTAAGCAA AAATTTGTAATCTCATTCAAATTTTCTAGCGTGAATGTATCTCAGTCCAT GTTGGCCAAGCTGGAACTCAAATTGGTAATGCCNTGCAAACAATTAGAGC ACTTTATTCTTTGAAGTGCAAAATTAACAGCAATCTCTGATGCTGGGCCT TCATGCCGCCAGGCTGCTTGTTTTGATTATGTTATCCTTTTTCCTATGTG TCATTTTCGTCTCTATAGCAACTTGTAACAGATGTAAACAGATATATAAG AGAACAAAGGAGGTCTGGAAATAGAGCGGGCTTTTCTCGAGAAATCCTTT TGTTCACAAGTTTGTTTTTGCCGTCACCGAGAAACCATAAACCACGTGAT CTACAATAGTGGATTTCATTGGTTTAGAAAATTCAACAACCAATCAAATT CGATCATGTGCACTACATAAACTGCACCTTGATCTTCCATTCCTCATTCG TTCTTCGCAAGGAAGTACAGGCGAACCGTTACGTCGCAAAGTATATCCCT GACTAAGTTTATCCACTTTTCAAAACTTTTCTTCTTTGATAACAAATCTC AATCAACATGGTAAGTCCATCAGTTTTTTTCAGCCTTTTTGCCTACAGTT TGGATCACTTCTACACAGGCCACAACTGACTTATCTTTGTAGACTCCTAT CCTACAGATTTTAATCGTTTCTAATCGCTAAAGAAATTGCTTCATACCTA ATCAAACTTCCCGTGATTTTTTTTTGCTTTGTTGTGGTCAAAATTCTTAG AATTCTACTAGACAATGCAGTGTCTTCATTTTCATGGTGTTTAACTCGTC ATGTGTCGTTTTGTTATGAAGACATTGCATTGCTTGATTTCAAATGGGGG AGTGTGCCTTGTCTATCTAAGCAAAAATTTATAATCTCATTCAAATTTTC CAGCGTGAATGTATCTCAGTCCATGTTGGCCAAGCTGGAACCCAAATTGG TAATGCCTGCTGGGAATTGTACTGTTTGGAGCATGGAATCCAACCTGATG GTCAAATGCCTTCAGACAAAACCATTGGAGGTGGAGATGATTCATTCAAC ACTTTCTTCAGTGAAACTGGTGCCGGTAAACATGTCCCAAGAGCTGTTTT CATGGATTTAGAACCAACTGTTGTCGGTATGTGGAAAAGATTATTTCCCA AAATTATCTAGTATTGAAAGTAGAATGTCTCTGTGCTTCAGCTATGTCAT CTTATCTGCCTGCGACTCAGCACTTTATCGCTCACTCATGTAAATTTATC AGAAATTATTTAGTTCGAAGCTCCAATTTCGCTTAAAATAAATTTACCCT TAGCTTTATGAAAAATTTCCAAACTGTAAAACCCATCAGATTATGTTATA ATATATTTTTCAATAAGATAAGTAATTAAATTTTGTAATTGGAAATTCCA CTATTGTACTCACTTTGAACAGGACTTTAAAAAACAGAGGTGATTATTTA CTTGGTTGATGTGGGTTTTTTTAGCCTGGAAAATTTTATGTTGGTCAGAA TTTAACTTTGTTTTATCCTTTTTCTTTTATAGATGAAATCAGAACTGGAA CATACCGTCAACTTTTCCACCCTGAACAACTGATCACTGGTAAAGAAGAT GCTGCCAACAATTACGCTCGTGGCCATTACACTGTTGGTAAAGAAATCAT CGATCAAGTTTTGGACCGTACTAGAAAACTCGCTGATCAATGCACTGGTC TTCAAGGATTTTTGATCTTCCACTCCTTCGGTGGTGGCACCGGATCTGGA TTCACCTCCTTGTTGATGGAACGTCTTTCTGTCGATTATGGAAAGAAGTC CAAATTAGAGTTTGCTGTCTACCCAGCTCCCCAAATCTCCACAGCTGTTG TTGAACCATACAATTCTGTCTTGACCACCCACACCACATTGGAACACTCT GACTGTGCATTCATGGTTGATAACGAAGCTATCTACGATATCTGCCGAAG AAACCTCGACATTGAGCGCCCCACCTACACCAACTTGAACAGATTGATTG GTCAAATTGTGTCATCTATCACTGCATCACTTCGGTTCGATGGGGCCCTA AATGTTGACTTGACTGAATTTCAAACTAACTTGGTCCCATACCCACGTAT CCATTTCCCATTGGCAACTTATGCTCCAGTTATCTCTGCAGAGAAAGCTT ACCATGAACAGCTCACTGTCTCAGAGATCACTAATGCCTGTTTCGAACCA GCTAACCAGATGGTCAAATGTGATCCACGACATGGTAAATACATGGCTTG CTGCTTGCTCTACCGTGGTGATGTTGTCCCCAAAGATGTCAATGCTGCCA TTGCTACTATCAAAACAAAACGTACAATCCAATTTGTTGACTGGTGCCCA ACTGGATTCAAAGTTGGAATCAATTACCAACCGCCAACTGTTGTTCCAGG AGGTGATCTTGCTAAAGTTCAACGTGCTGTTTGCATGTTGTCCAACACCA CTGCTGTTGCTGAAGCATGGGCCCGTTTGGATCATAAATTTGATTTGATG TACGCTAAACGTGCCTTTGTCCATTGGTATGTCGGTGAAGGTAAGGAAAA CCAAATTTAAAATATTTTGATTTTGAAATTATGCACAATAAAAGGATATC AAAATTGATTGTATTTTAATTTTAAGCTTAGCAATGTACTAAAATTATAA AGTGCAAATCCAAAATCATTGAAAGTGATTATGCTGGCCACATTTTGAAA TCACTGAACTATAAGTTTCATATCATTCTTTCCAGGTATGGAAGAAGGAG AGTTTTCAGAAGCTCGTGAAGACATGGCAGCCTTGGAGAAAGATTACGAA GAAGTCGGTGTTGATTCCATTGATGATGATGGAGAAGGCGAAGATGACGA ATATTAAGGAGATCTCCCCTAAACTGAGATCCTTTTTACAGTTATTTACT TGTAAGCAATATGTGTAAAAGAAATATGATGACATGAAAACAAAGATACA AAAGACTGAAAATGATAAATTGAGACGTCGTTCAGTTCCTTTTTGTTTTG AAATTTTTATACTTGATTCAATTTTAGGTCTTTTCTAATTTGTAAAATTT TCGATTTGTTCTTTACTGAAGTCCGTTCCCAAAACATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019673TCONS_00019673Clytia hemisphaericatranscript
TCONS_00019672TCONS_00019672Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019672-proteinTCONS_00019672-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000333supercontigsc0000333:117016..120653 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TUBA1Ctubulin alpha-1C chain isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3851.99 3620.83 4343.29 4424.09 4331.98 3535.4 2878.16 3029.22 2727.91 2960.03 3997.78 3037.37 1214.78 1288.13 1449.62 1306.88 2187.98 2155.79 1520.33 1372.56 1411.42 1585.66 2308.22 2032.48 965.07 981.6 2271.59 2547.78 1934.52 2003.68