XLOC_010973 (gene) - C. hemisphaerica

Overview
NameXLOC_010973
Unique NameXLOC_010973
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000329:46824..51062-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010973 ID=XLOC_010973|Name=XLOC_010973|organism=Clytia hemisphaerica|type=gene|length=4239bp|location=Sequence derived from alignment at sc0000329:46824..51062- (Clytia hemisphaerica)
CTAACAATTTAAGGCTCAAAGTGCCAAAAGATAAGGATAGCCGATTCTGA ACAGAATTTTACTGTTTCTTATAAAAAAAAGCGTAAGTGAAGACATGCCG GACAGGGTTGTGGCAAAATTTTCAGATTATAGGAAGTATCTTTGTCACAA ACGACTATTGTTGTTCTTTCAACAGGTGGACGTGATGGGTTGATGACACT GAACAATGTGGAATGTTTCGATCCCAAAACACAGAAGTGGGAAAACATCA CACCCATGCTAACACATCGTCATGGTTTGGGTGTGGCTGTACTTTCAGGC CCCATCTATGCCGTAGGTGGACACGATGGATGGTCTTATCTCAGCACTGT GGAAAGGTGAATAAAACTGCTCCTCTCATTTTCAAGAAGTTAATGCGTCT TCTCTGTAACGTTTACAAATGNACTGCTCCTCTCATTTTCAATAAGTTAA TGCGTCTTCTCTGTAACGTTTACAAATGAAATCTTTTATAATATCATTAT ATTCGACACTTGGTCTAACTTTTTTTTATTGTTGAACGACTGACCCTTCT TTTTGATTAGTGGCGTGGCTTATATCAAATCAACTTAGTAGTTTTGCCTT CAAAAACATCCTTCGAATATACCTTTACAATACCAGAGCGTGTTTGCTTT CATTAGATATGATCCAGTGACAGGACAATGGAGTTTCGTTGCTCCCATGA CTACACCACGAAGCACGGTGGGAGTTGCTGTTCTCCATAACAAGCTGTAT GCAGTGGGTGGACGTGATGGGTCCTCGTGTTTGAGTTCTGTCGAAGTGTA CGACCCGCACACCAACAAGTGGAGTTTGGCTGCTCCCATGATCAAGCGGA GAGGAGGTAAGCTGTTTTCATGTTATATGTTTCATTGGTAGCATTTTTCT TGGTCTAATGAAGATTGGCAGGTCAGTTGATGCTTATTGAATTTATTTGA ACCCCTATGGTATTGTAGGAAGCACTTTGTATCGAACACGTTAGAATGCT ATAACGCATTGGAAGTGTTCTGAGAAGAGCAGGATTAAGGAAGTTATTTA CTTGTCATCATAATAAGTCTAATTAGCAAGCGAATTAGATCTTACTTTAA ACCCTTCTCTAATCGGTTAAAAAAAAAAGATGCAAAATATGTGGTATTTT TTAATGTATTGTGGTGGTTTACATAACTCCTGCTTAACAATTCTTAACTA TAGATGCAATAATGATAAGAAATAGTGTGACGTAGATATTGAATCAATCG AATTCTTTTGTTAAAGGATATATACAATAAATGACAGTCTACATTATTTC ACCCTTTCTTTTTGTAGGTGTGGGTGTGTCAGTACTTCGTGGACACCTCT ATGCAGCTGGAGGTCACGATGCTCCTGCCAGCTCCGATTACTCCAAACAA TTTTCATCGGTTGAAAGATATGACCCGCGCATCGATCANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCAATGAAACTTCAAATGACCATTGTAGCTGTAAAATTAAGT AGTTTTGAATTACTCATAGGGTACCTAGTAAACGGGGGTCAGCTCGCATG AAATTCCATAAAGAGCAAAGAGAGCTTGGAAGATGATACCTCCTTCACAC AGCCCCACTGGGAACCCTTCCCACTGGAAAAGTTGTCCAAAATATCGTCC CGGGTGGGAAATTAACCCCGAACTTCTGGAACTTTTGTCCACACTGAAAA TAATCAAATAAACCAAACCTCACTGAATAATATTATTCTACTTTTCCCAT CCCCACTGAATTTTCTGATTTTTCCCCAGCCATAAAAAATAAAGGAATTT CGACTTTCAGTCCATTATTTTTATCCCCACTGGCTAAAAAAATCCTACCG GGTCTGTGAGAAGAGGGTGTAAGATTTCAAGCAAATTTCGTCAAACTATT CGATTCTCAGGCCGGGTATGTTATTACGATACTCTTAAATTTTTGCCAAA TTTCAGTCTGAATGTTCTTAACTGGGTCCTAATAAAAAAAAACTAAAACA TGCAAAGCAGATCAATGGTCAGCGTGAGGAATATAGTAAGAATGAAGTTA TCCATTCCATATGACCAAGAAATTTTTTAAAACCATAAAGAAAATACTTG AATAGCGAAAGAAATACAGTATAAAACACATTGAAATTGACTATCGCTAA ACAGGGAAAACGCTTTCTCTGTATTCCGTGGTTAAACCACATTATTTCTT ATAAAAAGCGTCAACTTAATGAAAATTACGACTGCAACCTGCAACCGTTG GACCAAAATATAGCCCCAAAATATTCTAGATCTCTTAATCCGTTAAGACG CGATCACGTAATTGCGTAATCCAAAATCTCCCAAATGTTGAAAATTGAGT TAGATTAAGTTTCGAAAAATGGAAAAATAGGGGGCAATTTTCCGGGGGGC AATTTTCTTAGGGGGNTTTTTTATTGTTGAACGACTGACCCTTCTTTTTG ATTAGTGGCGTGGCTTATATCAAATCAACTTAGTAGTTTTGCCTTCAAAA ACATCCTTCGAATATACCTTTACAATACCAGAGCGTGTTTGCTTTCATTA GATATGATCCAGTGACAGGACAATGGAGTTTCGTTGCTCCCATGACTACA CCACGAAGCACGGTGGGAGTTGCTGTTCTCCATAACAAGCTGTATGCAGT GGGTGGACGTGATGGGTCCTCGTGTTTGAGTTCTGTCGAAGTGTACGACC CGCACACCAACAAGTGGAGTTTGGCTGCTCCCATGATCAAGCGGAGAGGA GGTAAGCTGTTTTCATGTTATATGTTTCATTGGTAGCATTTTTCTTGGTC TAATGAAGATTGGCAGGTCAGTTGATGCTTATTGAATTTATTTGAACCCC TATGGTATTGTAGGAAGCACTTTGTTTCGAACACGTTAGAATGTTATAAC GCATTGGAAGTGTTCTGAGAAGAGCAGGATTAAGGAAGTTATTTACTTGT CATCATAATAAGTCTAATTAGCAAGCGAATTAGATCTTACTTTAAACCCT TCTCTAATCGGTTTAAAAAAAACGATGCAAAATATGTGGTATTTTTTAAT GTATTGTGGTGGTTTACATAACTCCTGCTTAACAATTCTTAACTATAGAT GCAATAATGATAAGAAATAGTGTGACGTAGATATTGAATCAATCGAATTC TTTTGTTAAAGGATATATACAATAAATGACAGTCTACATTATTTCACCCT TTCTTTTTGTAGGTGTGGGTGTGTCAGTACTTCGTGGACACCTCTATGCA GCTGGAGGTCACGATGCTCCTGCCAGCTCCGATTACTCCAAACAATTTTC ATCGGTTGAAAGATATGACCCGCGCATCGATCATTGGTGTTTGATTTCTT CCATGAAAAATTGTCGAGACGCGGTAGGGATGGCGGCGCTCGGTGATCGT TTGTACTCAGTTGGAGGGTATGATGGCAACTCATATTTAGATGCTGTTGA AGCTTACGATGCAGATTCGAACGATTGGCAATCGGTGGCGCCCTTAACAC ACCCGCGGGCCGGCGCCTGTGTTGTGGCGTTAAAACTTTAAAGACTTTCA ACTTCAATGACTTACATATTTCGCCAATCTCATGAAATTGATAGAGTACC TTTAAAATACGCTACATAAAGCTATTCTGGTTTTGCAGAATGTTCACTTA CCTTATCATCTTGTATAAATTGCTTTCTAGATCTACTGTATTTAAAAGGG AGTTTATTTTGTTATACTACGCATTTGATTCATAGAATCTTTATAAGTTA AACCATATCTTGCTATGGATAAGGTGTGAAATTTGATTCTCGTTCATTGA AAATGATCTTTTCAAAACTGTCATCGCCTGACATACATATCACTCGTCTA TAAATCTTGTTTGTGATACCCATGGTCTTCCTTTCACGCTTTACTTCCAC TTTTTCGCTCGTTGTTGTATTTTTTTATTTATAAAGTTTTGTAAGGATGA CGCATATATACTTAACTTGTACAAATGAAGTAGATATAATAATCATAATG AAGATAGAATGTATATATTTACATATAACAAGTAGTTGTGATTTCTTTTG TGGACATTTTCAATCTCCGTTATAACACGCTGTTCACCGCACTTTTGTTT CACATACTAAACTTATCCGATCAGCCCCTTCCAACTTTTGTTTGTAAAGT AAACAAATAGTCAAGTGAGTCCTGCATAGACAAAACATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019528TCONS_00019528Clytia hemisphaericatranscript
TCONS_00019527TCONS_00019527Clytia hemisphaericatranscript
TCONS_00019526TCONS_00019526Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019527-proteinTCONS_00019527-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000329supercontigsc0000329:46824..51062 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KLHDC8APREDICTED: kelch domain-containing protein 8A isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.85 53.01 18.48 11.88 18.54 13.97 20.51 18.1 17.77 18.95 13.93 11.54 15 13.42 10.1 10.95 16.59 15.66 9.36 11.52 12.94 14.01 26.7 27.81 16.04 17.57 7.67 7.38 19.84 18.35