XLOC_010374 (gene) - C. hemisphaerica

Overview
NameXLOC_010374
Unique NameXLOC_010374
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000301:156096..162190+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010374 ID=XLOC_010374|Name=XLOC_010374|organism=Clytia hemisphaerica|type=gene|length=6095bp|location=Sequence derived from alignment at sc0000301:156096..162190+ (Clytia hemisphaerica)
acaaaatgtaGCTGGTTGTAGCTGGTGGGTTGGAAGTGCAAATAACATCT CGTAAGTATATTTcccatttttttcacttttctgttttcttttctaATAG GACATGATTTCATGCGAAGAGCTATCTTTTTCACCTCGATGAGAATTCGG TTTAGGGAAAACAGAAAATACCGTTCTCTATtatgaaaacaaaggaaaaa acaAACTCGACTACGTTGCGGCTCGGTTATCATATTCAAGATTTTGTTGC ACATTAAATTagtaaactaaaataaaaagtcgttACAAATTTCTTAATTA GTTTGGTAATGATAATTTGATCTAGTGCTTTGGTTTGTTCTTGCATATTT GTGAATTATGGGTCTGCAATGTTTCCACGGAACCAACCTGCTGTTCATTG TTCCCGTGGCTCTGTTGTCATACATTTATCTTTTTTGTTGTACAAACATT GGTTGCATGTCTCACTGAACTCCAGTGACATTGGGAAACAGGCTTGACAG TTAGCTAATCCGTTGGAGCATTGGAGGAAGTAGTGTGGGTTGTATCGGCT GTAGTAGTGGTACTCAAAGTTTCCGTCAGCTTTTCCTTTGCAGAGGGAAT CTGGACATGGAACATGTGGTGGTGCTGTGTAGGCGACTGAAATTATAGGA AAATAATTTATTGATTGAGCTTCCTCTTGTAACACTCTTGAGCATACTGA AACGAAGGTTTTGTCATATTCCATAAGATCCAATTCTTGGATACACATGC ACAAGAAGACCgactttcgaaaataaaaattaatatcGTCGTAGAATGAC AAATTTTCTCAATCTTTGAAAGTGTTTGGTGGGGGTTTTGGTAtaatttt ataaagaaaaaaactttacttACCAGCCAAGAGAGCGATGAAAATAAAAG CATTCATACTCTTCAACTATTGTCTTGGTTTGCTTTTtgctttgtttgat ttttcacaGCAATTTTAAGTTGCAATTTGTTTCCAGTTGAATTGAGTTGA CCTTTTTATATGTTCGCTTTGATACAATTAAAATCGACTAACTGGTATAC TGTTATGTAAGATGATGTTGTCTGATCGAATTAGCTTTTTACCTTGAAAC AATTAGcatatactctcgggtacctaatagccggggggtttggaataagc ggggggggggggggggaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCTAGGAAgt gccattcgcgaaagtttatgctcgcgaaatattcttgacaaaatagaaaa tctgtaaaatttcaaactttgaataaaatgtaacttttattaCACTTTTT AGCtcgctaaaagactaataagtcaaaggacaaatgtttcaggcaatcca agaagtatttgttcctctaagccattttttcatgtgaaaattctcagttt tacgtcttgattcgcgaaagtttgtgctcacgaaaaatatttctccgtta aattcgcgaaagtaaatgttgtgaatttcgcgatttttcgtcctcgtgaa agtttctgctcgcgaaagtttgtacgcctaaagtattatGTAACAAGCCC GGGAGGGACTTACGGTacatttaaatatctttttgttCATAAGGGAAGAC GAATTTAGTTTCTTGTTCTACGGGAAAACCTTCAGAAAATTCTGGGTCGG TCGGCCGgtaagatgttcttaacatgttcttattttccccatttttggga tatttttgcccattttcctaaggaatcgggtgttttagagtccccaaagc cttaaaatgttcttaacttgttttaacattttggctatcgaagccttgtt tgttcttataaaaaacgtgtatagagCATGATTACAGATCAGATTTATTT TCCAAGATGTTGCCCGAAAAACTtcgttttccttattttttttcacGCTT ACCTTACACGAGTGCCCCATCCCCCCCCATGGTAACGAGTTAATCAAACT TAGATAGTATTTTTTACGAATTGTTTAGTTCTAGGGAAAACATTTTATTC GTGAACTTTTGTGGCTAACAATTTCCGATTTTCGAAGCAATGGTTTTCGA GAGACAAAGGGTATTTATTAATTGAATCAGATCATGAAGCTTCTCGTGGT TGTTGTATAAGTAGATTTATGATGAAAACGCATTATGTAAGCAACACTTC ATCTGGTTAATCCAATTTGCGTCACTTCGGGGATGAGTTCCTtgacatca aatttttcaagaaGTTCCAAACTTTGGTTTCTGCCAGGCACCAGCGGAGG TGAATGAGGCAAAAACAGCTTAGCAACGACGTCATTTCAGcatgattttc aaatcaaatgaatggGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAA GCCTGTCGGATTTTGAAAGGTGCAAGTGTCGGATGACTTGTCTCGATGAA TGTAAAGTTTGAGATTGATTCCTTTTGGATGTTGGTACATGAATCATATT CAAATTCACCAATCAAAACCCCACAGTGATAGCATAAGCACGAAGAAAGA TATATCAGCTTCTTTGGTTGTTATGCAAGCCATGTcgggaaaaaaacttt tgacgCCATGttgaaaatcaccaaaattcaaatttttggcgGCAACGCGC TCTCTGCAAAAAGGAAAAAGCCGcgctttgtttttgaaacaatgaGTTCT CCGTCCAGTCGTTAGAAGTTCATGctgttttcaagattttgagagaaaga agcttttacaaaaatattccgaaaatttattaatttttgtttggcAAAAG ATACACCAATTagtgcgaaaaatttttcaaaatgttttttcttcgccgaa actaagatCCTCAAAGTTTAAACACTtgtcttcgcaaaagtcttcttctt catcaaatttttttccatGTGATTTTTACCTTTTACCTTTTATGTTTTTT CGTAGTTTCCTTAGATAAAAAGTGAACCTGTGGTGAAGAGATAGGAAGGA TGAATCCTATCCCGGGATAGTTACCTATTCTAAGATAGTTTTAAAACCGT TGGCCTTTTTCTAGCGGCACAACAGAGCCATAACGCAATAATCTACCCTG GGACAAACAAAACCGTTtaaggagatatttgagttaTAGAAGTTTCGGTT ATGTACACTGTAGTTCTAAATGATCACACATCGTATCAAATCTGATTGTT CTGTTTTCTAGTCATGGATTGGGTACAGGTACACAAAAAGAGGAAGAAAA GCGAAACAAAAAGTTCGCCAAACAACAGCAGCTTCTTTACgacctcctcc tcctcctcctcctcatCGTCGACAAGAAAGGCGATGGTGACACCAAAAGT CTCTCGCTCATTAATCCTCATCTCAAGCACATCAAATCTTTTTGATCAAC AAACGGCACAACACGATCATATAAAATGCAGACCAGATGGCGTGCACCAC GAGAAAGAAATAGAACAGAGCTATCAATACCACACGCCACACACTTCTAT CAACCCTCAAGTCAACCAGCAAATTTTCATCGGTAACCTCAAACACGATA TGGAGGACATCACTTTAGTAAGGAAGTTACAACAACTTTTCAAAGACAGC GTGGACCTAGAAATACCAGAATTTCGGTTCACTATATTTCAGCGCGATTC GAAGAAACACCCACGCAAGTATGGCTATCTAAATTTGGCCACTTTGCGCG ATGAAGAAAAAGCTTATAAACTTGACGGGTTGACAAATTTAGATTTTGTT ATCGAAGGACTTGCACTTAATGTTAACAAACGGCTTTCAACGCGGAACCG CGTCACGAAATGGAACAAATTAACGTTTAATGGGCGCAGACGTTTGGTCA ATAGAAGTCGTTCTGATACAGATGTCCAAGCTGAcgacaaatcaaattta aaagctCAAAGCTCTAAACGTGAGTTAATGTACGGGCAAAATTTGCCCAG TGAAGACCGCGTGACGGAATACAAGAAAGGAGGTGGTAACTACTTGAGGT GTACTCTTATTCAACATGTTCGAAAATACGTGTGTGCTTTCCTCAACAGT GAAGGTAAGCAATTCAtttattatttgtttgtttgacaAGCTTTTGATGT GAAACCCTCTAATGTTTTATTTATCATGACAATCAATTAAAAAGACAAGA CCCTCTTCTTTTATAGGTGGAAGGCTTATGATAGGTGTCGATGACACGTG CAAAGTGTTTGGTGTGAGTTGTACACGAAAACAAGAAGATTTGGCACGCT GCCAAATTGACAACACAATCAAACAGTTTCAACCGCACGTTGCACCTCAC ATGTACATGGTGGAATTCATCCCTGTACGCTTGGTACCTCATGATAATGT GGAATTCGATTGCATTGATCCTTTGCTCAAAGTGTTGAAAATATCCGTCG TCCGACAAAACATGATGGCCGCCACACTTTACGTCaatgataaagaaaat attttcttacgaCGTGACGGCAGTGTTGAAGGACCTTTGAAAATTCCACA AATCATCGAATGGTGTCGCACACAATTCTCGCAAAATAACATCCCTCACA ACGATCAAGACACTCCCGCACTTTTGAGCCATTCTAATAGTGTCAACTTC GAAAAGATATTAGATCAGTTATCAAAGAGACAGAATGAAGTAAGTTAGAT CGAATTTATTCAAATGATCATCAATGAAAAGTGATTTTCAAACGCTGCTT CCTGATCATTGTTAGAAGCACGACTATAAGGAGTACGAGTAATAAAATAA GTTTAATAAGTAGTAAGTCtatcttttattttctttggtACTGCATCACG AGGTCCGTTAAGACAATAATATGAACAATAATAGCAATATGAATTCAACA GGTACTGGCACAAATGGAAGAAAGCTTTCATTCAGCAAGTATGGAGCTTC AAGAGAAAATCAAACTCCTGCAAGTGGTTATCAACACGAAAGAAAACCAA GTCACACAAATCACACAAAATCTCTTCGACGCTCTTAAAAGACTGGAACA AGAAAGGAAAAGGCAAAAGCATCGCACTGATTACATGTGTACAATCTGCT AACGTAAATCTTAGgaatgaaagaagaaaacaatTCAAGCAATCTAAAAA ATTTGCGATTTCAATTCCTATATCTTCCCTATAAATGAGTGCGCCATAAA GtagaattaaaaataaatatcttaAAGCAAtacaattattaaaaaatatc gTATATAATTTGCATGTAAATTGCTAAATTTGGATAAGAGTAGCTTCTCA ATAAtataaatttcaaacaaaattggcagtttgaaaaattcgaAGTGTAC GAACAAATTTGTCACACAAAAATTGAGCACTTTTAGTGGTAGCAATAATG GTATTCTAAATcaagaaaaagggaaaaaatctAGAGAATAATTTTCCTCA TTTTACAAATGGTTTTGACCAGCCCCTCATCCATCGATTGTTTTTGCGCG ATGGAAGTAAATCTGAAGATAAATAAATGTGACAATCATTAGTAATTTGG GTGGAACTAAACTAATATGCGGGGAAGAATGATTTAGgaattgga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018500TCONS_00018500Clytia hemisphaericatranscript
TCONS_00018501TCONS_00018501Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018500-proteinTCONS_00018500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:156096..162190 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.09 0.12 0.04 0.03 0.02 0.03 0.02 0 0.06 0.02 0.04 0.01 0 0.03 0 0.01 0.05 0.02 0 0.07 0.1 0.02 0.02 0.72 0.86 0.19 0.1 0.08 0.09