XLOC_010243 (gene) - C. hemisphaerica

Overview
NameXLOC_010243
Unique NameXLOC_010243
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:327827..337790-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010243 ID=XLOC_010243|Name=XLOC_010243|organism=Clytia hemisphaerica|type=gene|length=9964bp|location=Sequence derived from alignment at sc0000291:327827..337790- (Clytia hemisphaerica)
TTCCAAGAGGCTTCTCAATAATGGAAAATGCCCCTCGACAAATTTTTATT
ATTTTCTAACACGAGTCAAATATCTTCGTGTTATTAGTATGCTACGTTTA
AACCCGACTGAGACTGCGGTCGACAACAACACACTTGGACCTGATGTCGA
CAGGTCGATGCAGTTTGTTAAATGATGGATGAAGTAAAGAAGATTGTAAG
AGCTCTTTTAATCTCCACAAAAAATGGCCTATCAGTTAGCGAACTTTGCT
CCGAATACTCGTTGGTAGCATCCAAACCCTTACCCTACAAAGAACTAGGA
TATTATTCTGCAGTTGAACTTGTGAAAGACATGCCAGATGTTGTAAGACC
TATTTTCATTTCTGGGGGTGTTATGTTGCTTAAAGGGATAGCTGACAGCT
CAACAGCTCACATTAATGAACTTGTGCGGCATCAAAAGTCTGTTAGATAC
AATACAAAAATTGTTACAAATGTTCAGCAGAAGCCTGTGAAAATGGTTGT
ACCCGATTATGTAAGAACAAAGATTTCAAAACTCATTGCAACATACCCAA
GAGGAGTTGAGATAAAAAACTTTGAAGAGTCTTATAAAAGAAGATATGGT
AGAAAAATGGATTGTCAATCCTTTGGATTCAATGATATGAAAGAAGTTAT
TATGAAGTGCCAAGATATTGTGAAAGTGAAACATCCAGCTCCACATATAG
CCTTTTTATATCCTACCCAACAATCCCTGAAAAAAGAAGAAGAGAGAATT
CCCCTGTTTTCCAATCCTCAACAAAGTCAAACCAACCATTTTGCACCCTT
ACCAAATCGCCATCAACAATCTCGCTCCTATTACCAACAATTAACTGACC
CAATTTCAAAGAATAGCGCTTTGCCACAATCTGTCAAAATGGAGATTTAT
ACGTTGTTGACAAAATTTAAGTTTGGATTACCAGCTGCAAAATTTATTTT
TGAATACAAACAGTTTTTCCAAAAGTCATTTCAAATCCACACCTATGGTT
TTCACAGTGTCATTGAAATGATGTCCAAAATTCCCGATATTGTAAAGATT
GAAAGACCACAGAGTGGAGGAGATTGGATTTTAAGATCTGTAGCAACTCA
GGAACTCCCCGCCATTGTGAGTAATAACAAACACCCTTCACCAACCAAAC
AAGTTGGAGACAAAATAAAATGTTACATTTCCTATATCATCAGTCCAAGT
TCCTTTTGGTATCAAGATAAAAAATATGTTTCAGAACTTGACGAATTGAT
GGAAAGAATAAATGAATTTTATAACTCAGTTAAAGGAGACCTATTTACTT
CACTTGATTTCCAGCCTGGTCAAATTTGTTGTGCATTATATTCAGAGGAT
AATCAATGGTATCGAGCTATTGTCAAAAGCAAAGTTTCAAAAGACACAGT
CAAAGTTCACTATATCGATTATGGAAATGAAACTACTGTTGAAATTTCTT
CATTGAGACTTTTACTTCAAGAATTTTACACCTTGCAGCATCAAGCGCAA
CAAGGAAGACTTGCTGATATTGAACCCTGTAATGATATTTGGAGTGATCT
TGGCATTAAAGAATTTTTCAATCAGACACAAGATCAAGAACTTTTGGCTA
CAGTTGTTAAAGTTGACCGAGCACATAACCTTGTTCTTGCCCCAGCAAAC
GATGATTCCCAAAATATAGCCCAAATTCTATCGTTTAAAGGTTTTGGAAA
CATGAGAGGTTATTCAGAGACTATCAATAAGGATAAAAATTCCCAAAAAG
GTTCTTGTGACCAAGAACAGATAAACAATCTTAAAAACTATTACCAAAAT
TATTATCAAGCTTTGAAAGATGTTTCACAACTATCTACCAAACTGCAGCA
AAACCCTGTCATACCCAAAACAGTATCACCTACTCCAATACAGCAACCAC
AGAACGTTTCAGAAAGCATCAAATTAATGAAATCATTAGAAGTAACAGAA
CATTTTGTTATTCACATGATTAACTACAAAGATGAAGCATTTGTTGCTGG
TGCTGAGATTTCACATCTATTTTGGAATGTTGATATATTGCGACAAATGG
CACGGCAAAAAAGAATCAACTTGGTAAGAGAAATCATCACCTCTGAAGAT
TCTCCCAAACTCATTGAACTATGCAAACAAGAAGATGTCAAAGGAATGTT
AGATTGTGGTACAAATCAAAGTTTGATAGTTTATAATTTGACAGAAGTTC
CACAATTATTTCAAGCATTCAAACCTATTCATGAGAATAGCAAAGCTCTG
ATTGAAAAAGAAATTGAAATGTTAGAGTCACTTAAAGAAAAATATTGGGA
TGCAAATAATATGAAAATGTCAGAGGCAGAATCTGCTGCATTGCAAATAC
AAGCATTGAAATTCAAGAAGAAAAGGCTTTACATGAGTATGATTACAAAT
GCTGCAAAGGAAAATACGATGGACGAAATCCTTGCAATTGAAAAAGAGAT
CAATTTACTAAGTATAGGCTAGAATTGATTTCAATATTTTGTCATATATA
CACTTGTCTTTCACCTTACAACATCTTACAAGATTTTTAAATGACTCCGA
GATCCGTTTTTGAGGTACTTTTTTCTTATTGAATTCCTGGTCTTATGCTA
TGGTACCTTTATTTCGTTTTCTTTAGTAGTCAATATTTTTTAATTAGGTA
GTGTAAATAGTTTCTTAAAACAGAAAGAAAGGGCATTTCCATGTATAGAA
GATGTATAAAACGAGAATATTATATTTTTATCTAACCTGTAAAACTAAAA
AATAAGCAATAAGAATTCTAGCTGCAGATTTTTTTTATCAATGAAATAGG
GATTTGTGCCAAGACTTTTTGCTTTATAAATGGCAAATATTAATACAAAT
TCTTTCATGTTGTGTGTTACTTAGGCCAACAAATTCTTTGCATTAACATT
AGGTAAGCGTCTTATCAGAGTTTACAAGCAAACAGAGATTTTTTGGCTTC
TGCTTTTATATTTTATAGTTTTGGATAAACGTTTTTATAGATTGCTATAT
ATAAAGTATATTCATTACATGATTAGATAAGTTTTTTGATAACAATGAAG
CTGTTTATCAATTCCAACGGGTTTTGAACTGTTAAGGGAGAGATTTCTTT
TTATTATCTTGAATGAATTTTTAATCTAAATGAATTATTATCTTTTACAT
AACTCCCATCTCTTGTAATTTCCTCGCAAAATCAAAACAAACTTTGCACA
GAATGTCTGATAGTCAAATTTCTGATGTAGTATGTAAAATTAATCATAAC
TTTTTATCAAGTAAAATACCAAAGATTCTGAGAAAATCAAGGAATTGATA
TGTTTAGCAAAGCTTCTTGTCTTACACATTTTTCTTTTTATAGGAACCAG
GTTTTCTGATTTAGAAATACATTTGATTTGATTTTTTTAGGTTTTCATGT
TTTATAAATGATAAATGCTCTCATGCTTTTCTTGTGCTAACTTTATTCAC
TTATGTTAAGTTAATTGAGGCTTAAACTGAGTCCTTTTTAGCCATTTCTG
AAATTGTTCTCGAATTGTTCGCAATTTGGTCTTAAATAAATTGTTCTTAT
CAAAAGAAAAGCGTGTATTTAGTTGCGTTGTAAATGTTATATTTTGTTTT
ACTAGTTTTACTTTTTCAGAGAAATATCTTTTTATCATCTTTGCATTTTG
TTTAATCGGATGAAACTACATTCGTGTAAGAGATTGACATGTGATTTCGG
TGACGTCATCTTTGTTTCCAGTAACAATTATATTTTATGGCATTCTTTTC
ATAATTGAGTTTCGGGTGCACTCGAGAAGAGAGGCGAGAGGACGAGTGTC
GAATAATAAATATCTTATTCTGTTATCTGATACTATGATAAGAAAATTAG
TTTTTTATGCAGACTTTTCGTACACACACATTAAAGTTCCCAACTTTTAT
GTATAATTTGAGTCGTTGTTAAACTCCCCTTTTTAAAGTACAGGATATAT
AGTGACATGGTATAAAATGATTTTCTAGACTTTATGACCATTAATAAACA
TCCGTTGGGAGTGCGTTTTTAATTAACAACTTAATTACGTTTCTTTTCTT
TATTTTCAGGAAAAACGAAAACAAAAATAAATACGACAAAATGGAAATGG
ATATCGAAATGGATTCAGAGGTGAAAAGAAAACCACCGATGGATAGAGGA
GGAGTTGGTAGCCGCAAGTTAACAAGACAAACACCTTTATCCAAGAATTC
GCCTAGTAGAGTGAGGCGTGCTCATACTATGGATACTCGTTCTAGAGCAG
GTTAGTTGGTACTTCTCTATGATCTGGAAGAATTCAGACCTTATCATTTG
TTTTTTATCTATTTTTGTTTTAACTCTGATGTGGTTCCTTCGACCTACGG
GGCTTTATCAAGGGTGTGTTTTTAGACATCCTTAAAATTCCACACGATTT
CTGTTTAAAATTATGACATATTTTAGAATATATCCATTTCTCGCTTTCTT
CCTTTTCACTCCCGCTGATTTTGAAATACAATATCGACCTGGGATTTCAT
TTTCTCTTCTATCTCTCCTTTCTTTTGTTATTTCTTATCGTAATATTGTT
TTAATATTCAAATATTTTTGGACCTACCTAAGGTAGTCCTTTAAATTAAC
CCTTGTCCGTTCGTTCGTTCGTTCGTTCGTCCGTTCGTTCGTCTGTTGCC
AGCTTTTCTCGAGATCGGCTCATTAGTTTTTTCTAATTTTTANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAAAAACATTATTGATAACAATGCTCACCATCAAGCATGATTC
AATTGTCAATAAAACTGATTTTTGCGACCAGAACTTCCTATTTATTTTTT
CCCTGCAACCAGCTGCAACCCTTCTCTCTCCCCCCATCAACAATCAATGA
TGAATTTATTGTGTTGTGTATTTTCGCTAAATGCTATATTTTCTGACTGA
TTTTTTTCATTTTTCTTTTCGCATTGCTAACTAACTTTCATCATCAGGTA
GGTCCATTCAGCATGTTGCTTGTTTTGTTTATTTTGAATGTAGAGATGAA
TATTATCAGGCTTTTTAGAAATTCTTGGTTTTCTTATTCCTTTCAAAGTC
TCACAGTCGTGTTTTGTCGGACTATTATAAACGTCTTTTGATCCTTCAGA
GTGAAAGAGGAAAAATTATAAAGTCGATTCAAATCATGCATATTCTTGCA
TTTTATAACGCATACCTCAAAGCACCTTTTCACAAGATTTTTATTTCCGG
GAAATTCCAAACTAACTAAAATAATTTTGATATTAAAATAAACCCGTGCT
ATGGAAATTGTTGTTGGCTTCTGTTTGATTGTCATGTGAAAATATGTCTG
TCTTCTGTGTACTGTACTAGTCCGTACTTGCCCCGCACTAAGGTCTTATT
TGTATATTGATTATTTTCTGTTTAGATGCCAGAGCAATTTTGGAGGAACG
AGAAGATGGAGCGAAAAGAAGTTTGAACATTGACGAAACTGATTGTGTTT
ACGTTCGTAAGTCGTCCAATAAAAACATTCGAAAAACATCTGAAGAACGC
AGACAGAAATATATACGTGATCGACGCCATACGGTAGAGTTAGGTGGTGC
AAACAGCATAAAACCTGTAGATAATATGAACTCTGTAACGGCGACGCAAT
GTAATTGTCGAAACCATAAAGGAGGGTTAGGATGTCGTCGATGCCGGAGG
GTTCGTCGACTTACTGACACTGTTACTGAAAGCGAACTCATGCAACACGA
AACAAAATTGATTGTTTTGGAATTTTTACGGTCTCTAAGACCTGATCAGT
TAAGAGCTAGATCGCGGTCGTTTGAATATCTCGCTACTGAGGCACCTAAA
ATTCCGATCTCCAAATCGTTTAGTTCCTTTACAAGGGAGGAACTTGAACT
TGGAGAGAAAAACAGCGATGAGATACTCTCCGAGATTCAACAAATGAAGA
AAGTACAGTCGGAAATTGTAATGGAAAGAGAAGAACCATCAAAACAAACC
GAGGAAGAAAGTGATTCAAATGATGATGTAGAAATGTTTTCGCAAAATCG
TGAGGTAATAGAATTACATTCACAAGTCAACCAAACAGGCGGAGGTCATG
AACATTCCATTCCGTCGGCCCCAGGAGGAAGAGTTGATACCTGTTTCACA
GACATACCAATGGAACCCCCTCTTCCTCTGCCGCCTCCACCGGTGGGAAG
CAGAAAACAAGCTCCGCCGATAGCTACCCCAATGCGACCCAAACATGCTT
CAGCGCCACCACTTCAAATGAACGGAATATTCACTCAACAGCCACCCTCG
CCACCGCCCTTGCCACCCGAAGCATCATCCTTAAATAACAACCAAATGCC
CACGGCTGAAGGGCAAAAAAGAACTGACTCTGAAAAAGCAGAGAAGAGAA
ATAGTGTTATCAAATATAATACAATGACCATCGGTGAAGCAGATCATATG
AAGTTATTAGAAATGATTCGCCAAAATGAGAATAAAATGGAAAGCACGGG
CGGCGCGAAGTTTGGTCGTAGTCGAAGTGATATTTCGGAGGAGAAATATG
CGGCTGTTCGAAGTAAGATTCAAGCAATGAAAGTACCTGTTGCCAAATGG
CTTGATGAACATTCCAAAATAACAAAAAAGAAAATTTTGCAAGATATTCG
CCGTTTCGATAAATCAAGGCTCGCTAATGGCGCTGATGGTGGTGGTGAGA
AGAAGCAGAGAAAGAAGGGTCATAGGAAAACAAAATCTTGGTCCGACAAA
AAGAACTCTCCTGGTTTAAGGTTAGATGAAATTTAAGTTACTTACAACAA
AATGTTGAAAAAATCGAAGGCTTTTTTAGTTTTCCTAGTTAGTTTTATAT
CTGGTCTTTATAGTGGAATGGTTTAGAAAATCAAACCATCAAACAAACCA
AATTGATGAAATTGACGACTTCATTTTTTTCAGCTTAAAGATTCCAAAGA
ACAGACTCCCGCCGATAGAGGATGTCGCTTCCAAACCTCTCGACACAGAC
ATCTTTACACCGGAGACAATGGCTGTCAACAAACTCGAAATAATTAGTCA
GCAGATTATGGAAGACTTCCCGAACCTTCTGGAAAACCCGATCACTCAGA
TGATCAAACTGATGGCCAATAATAAAAACATCGAAGACTATGATCAATTC
ACCAGAGTAGCAAAACCAGTGTACGAGATGACTGTACAAAAGACAGATCC
GCAAAAGGTGTCCGTTTGGTCACGTGTTGCTATGGTTTTATACGTTGTCA
GGGAGACATTATTTCAAGGGAATTTGAACGACACACAAATGGAGATGTTG
GTTGAACACTCCACCAAATTCTTCACAGAAAACGCAGTCGATACCGTCAA
AAATGAGGGAGGCTGGGAGGTAAATACTTATGATTTAAACTAGATTGCCC
CTCTGGTATAAGATTCTTGTCACTTCCGCTATTTTTTCCCGGGATAACCA
CATGGCTTATAAGCAGCTTCTAGGCGGCCCCTAAGAATTTAGGTGACCCT
TAGAATTTAGGCGGCCCCTATAATGTAAACTAATATGAAACGAAAACTGA
TGTAAAAATATTCTAGATGGCCCCTAAGTTTGAGAAGCTTTGAAAATTTG
AAAAATAAGATGTATTTTTGGTAGGCACAATTGAATGCAACATAAGCCTG
TTGACAAAAATCCCACTGAGACAGAACCTTTATAAAATGTGAAAATATGG
TTGATGAAATTTCTGAAATGGACAAAGTTTGGCGCCGCAGGGTAAAATTT
TTGCTCTTCTAAATTTGGTGTGACCAAATTAACACAATAATTTAGAATTC
ATCCCCCATTTTAGTTTGAATAAAAGTAAGTGACCCCTAGCTGAGAAGGT
GGCCCCTGACCTAAAGCTATTTCTAGTTACCAGTTGTTGTTGAACCTTTT
TAGCCCCCAGCATGAAATTGGAAAGGGCTTGTTTCTAAAGGTACGGAATA
TCTTAAATTTACTCGAGGTCTTGGTCTTTTTCCGCTAGAAAAGTGGTAAA
GGAATCTTAGTGCTGAAATGGGGATCTTTTACAAAACGACGGTATTAAAG
AAGCTGGCTGCTAAAGCACCGCTTAAGTCAAGAATTTGGTGGTATGAAAA
AAAAAGAAATCAGTTTGACCTGGATAATCAACCTGTTTGTGTAATAGACC
TTATCGGAGTTTTTGATTTTTATAAAAAAGCGATGCATTGTGGGATTGTT
TCGAATAGATTGATTAGAATATTGTAATACACTCGATACAATCCTACAAT
GCATCGTTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTGTATTA
CAGTTTACAGAAGACTCTCAACTTTCTTTATCAACAGGGTGCGTTGGGCG
AAGAGATATTTAACTCTACGTGTTTTGTTTATGACGAACCTCCCATGGAA
TCAAGTGACGAATGCTTGACTCACGGAGATAGTTGTCCCTCAACGCGCCA
TTCCTCAATTTCAACTGATGATGTAACCAGTGATAGTAACCATAGTAACA
GTGATGTTTCACCCAATCAGAACGAAGAATTGGCATCACGTGACAGTAGT
TTTCATAGTTTGGTTCCGTACGGTGCAGCAGTTGGTGCGGTGGCATTAGG
ACTAATGTATAGTTATTCTAAACATTGAAACCCAAGGTTGCAATGAGAGT
GCGTCTTGCTACCACTTCTTTGATACATTTATAATATTTGGCTTAAGTTT
GTTTGTTGTTTACGGACCGTAAGCTTCTTTTAACAAACAGGCCAAACGGC
CAGAAATTAGGATGGGAAATGTGAATTAGAATAACGAAACTTTATAAATT
GATACAAACAATTTGTAAATCTTTACAATTTTTTCGACCTGTGAAATATG
AATATAATTTATACTGAGGTCAATGATGAGAGGAAGTTTTATTTCCTTCT
TAGAATTTGTATTGATAGTTCTTGTGGATAATTAATTTTATAGCGTTTAT
TTTTATAGGAATTTATACTTATAGTATTTAGGGATTCGAATGTATATATT
ACAAATTAATAATGAATTGATTTCTAGAGAATTGATAGAAAGATAACCAT
CAGCAATGATCGAGAGCTGTTCTTCTCGACTACGATAATTGTATCCGATC
GGAAGTTGGTTCCATTACATTGTGAGAAACATTAGTAGCTTCTTCGTAGG
AAATCGTAGGACGTGAAATTTAGGCAACAAAACGTACAACACCCCGTCTC
GCCCTCTGGAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018226TCONS_00018226Clytia hemisphaericatranscript
TCONS_00018225TCONS_00018225Clytia hemisphaericatranscript
TCONS_00018224TCONS_00018224Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018225-proteinTCONS_00018225-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:327827..337790 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.71	11	3.61	2.67	37.79	31.03	25.6	27.19	11.91	20.71	12.38	9.59	10.56	9.41	14.62	16.65	15.89	13.28	6.54	5.47	11.7	11.13	19.91	20.7	22.26	27.8	9.62	6.02	11.08	12.63