XLOC_010085 (gene) - C. hemisphaerica

Overview
NameXLOC_010085
Unique NameXLOC_010085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000282:315807..324810+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010085 ID=XLOC_010085|Name=XLOC_010085|organism=Clytia hemisphaerica|type=gene|length=9004bp|location=Sequence derived from alignment at sc0000282:315807..324810+ (Clytia hemisphaerica)
GCCATTATGCACAAAAACAGATATGCAGAGACTTTCAAACGTTGAGATAT AAGAAGTTATCAAGTTGTATTCATCAAACGCGCCAATGAAACATTTCATC TCCAAGAATGTCTAATATGCACTTGCTATCTTCTTTGGTGGCTATTTTGA CTTCAATTTCATTGACCTCAGGTAAGTTTAACTCCTATGATATCTTCATG CAAAAAACTTTAGCGAATACATGTGTagtcttaacatgttcttactttcg gccattttcataagaaattgGTTGTTTTAGAATCCTTGAAATGTTCATAA CTTGTGAAACATAATCTGTTGAAATTTGGACTGATAAATTGCAGTATAAA TCTGATCATCGAGTACCTTTaaggcaatttttttaatagaCCTTACCgga gatttttctaaaaaaagcgatgcattgtgggattgtttcgagtgtattac aatagaaatctcctAGGAATTCCTTAattgaattctattgtaatacactc gaaacaattccacaaaatgcatcgcttttttataaaaatcaaaaactccg ataaggtcaaTTTACATGAAGTCCATTTTTTAGGAGTTGAAATCAAGACG ACATCTCCCGCAGTATACCAAGTTGGAAAATCAGCAATTCTGGTCTGGAA CATCACTTACACAAAAGCAGAAGTTTACAAACATTCATTTCTGAACTTGA GTTTCAATGATACTCATTATGTACATGTTGGCCCTAACAATAAAAAAGAC ATTGACCTGTTATGGGAACAAGGAATAAGTGTTCTCTTTGACACAAATAG TGTGGTTGTTCGAGTCCACAAGCTGAACTATGGAGACGTGTTGAATTGCT CTGTTGAGGCTTTTGGCCAGACAGCGTCTTTCAAGAACATCAGTCTCACA AAAAAGACTATCTTACTTCAAAATGTGAAAGGTATTAACTTGACTTACTT AAATTAAGATCCTAATCCCATGGGGATCTTCTTGGAGACAAACTCTTTCC ACTTTTTGCACGGCGCTCAACAGTAAGAAGTGGGATCCCTGTGTCTTCTT GGATTAGATCGCTCCATCTTTTTCAGGGGACGTCCACGAGGTATGAAGAT TAGATTGTAGAAAGGATGATGCATAATGTACTTGACCTGAAACCTTTCGT TCATCAATTAACAGAAAATTCCCCACTTTGAGGCCGGTATTCAGTCAACT TTTCCCACATTCCTTTACCACCCTCTCGTCACGTCAGGATCGGTAAATCA TGGCGCTATTTGATTAAACCACAGATATATTTTTTGGTGCAAGAAAATTC TGTTTGCCTGCTTACTTaaaaccacagatatctatCATATTCCTTCACAC ACTAGATAGGTTAACTGCTCACAGTGTCCAGTTTTGAAGTTGACTAGTCT GCCATGTTGTTTTTCATTTAAtcttagattttcgaacgttcgaatttcaa aacattcgaaaagtcCTGTTGACGAcaagaattgaaaacaagatggcgcT TTAGCCAGCTTTTAAATTGGACACGCTTCCTTTTATATGGGAAGCCCGAT CCAGTCACTTATCGATCCACTAGAGACTAGTGGATTAAACCATCATTTGT TAAACCTTGAAAATAAATGATGTATCCCTTCTTTGACAACTTGAACAAGC TCTGATATCATTGAGCACTCTCTACAGATAGAAGAAAATATACTTGTATA ACTATCTTAATATTTATATTTAAGGTGGAGTAACGAACTGCGGCGGTAAG GTGGTTCAAAAGGTTTACCAGATCCAAGAAGATAGATATTCTACACATAT CTCATTAACTTTATGTGGAAACCCAACACCTTCATTAAAATACACTTGGG CTGAAGAGAGCAATGGTTTAGCGAGGATCAATCATGATTTTGAAGATGCA AAGACAAGAAAATATCGATATAGTATCGATTTGTATAACATTACTCGAAA ACATTGTGGAAGTGAGATCCATTTTAAAGCTTTCGGATTCAAAACATGGA TGGCCTCCTCGAGATTGATGGTCAAATGTGAGTATTCtgcatcactgcaa tgtcttctgcatcactgcaatgtcttctgcatcactgcaatgtcttctgc atcactgcaatgtcttctgcatcactgcaatgtcttctgcatcactgcaa tgtcttctgcatcactgcaatgtcttctgcatcactgcaatgtcttctgc aTCACTGCAATATCTTCtgcatcactgcaatgtctttTGCATCATCCAAC GGCtaattggttgcaagtgacgtattgacgtgttttacgtcacttacaac caatcagctatttgGTCCGCgatgtaatgtcagaaaatattgcaaaatga tgcatatcatgaattcatgatatgcgcatcactgcaatgtcttctgcaTC ATCCAACAGGTGATgactgattggttgtaagtgacgtaaaataagtcaat acgtcacttacaaccaatcagctattgggtctatgatgtaatgttagaag acattgcactggtgcatattatgaatttTAGTGTACGTAATAGTCGAAAC TCTATCGCATAATTATCACTATTTTTTCGGATTCGATTCGTTCGATCACG ATTGATAGAGAACAAAAACAGCAATGGAGCCGATAGAATCagatagaatt tcatttttaaagatttctaaaACTATTCGATACAGTTTCGATTGCGATCG GTTGCAATCAGTTTGGTCCGattgattcaaaattgaaaattctgcTTATA gtcttttataaaaataactttataagaacaaaaaggCTAAAAATGTCGAA GTATAAAGAAAAAAGCAGAACCGTGAAAGGCTGAGTTATACCTTTGAAGG ATTACTTACCTTAAGGGATGTAATTTTTGCAATAACTGATTTTAGTGGAA CTTACTTTCATGTTGCGAGGGCTGGAGATTTTTCACGCTTGACACCcact ttttgttgaaattctTTCCTAGGAGTTACAAGAATTTatagtaaaaattg catttcacggaactaattttcacagtACACaccaaaaaacgcaaaaatta gtgtcgcgaaaataagttccgcGAAAAATAGGTGAGTAAAATAAGGACCG AATAAATAGAAATaagatataaaaatttaaaatacccCAATTTTAgccta ttaataagaacatgataagaacaaatttaggctcaaaatgcaaaaaagaa agaagaagggggCTGGGCGATCAGGCCTGGGCCTGACCACATTTTTTCAG AGCAAAAAGAAGATTTACTTAATAAGCCTAATTCTGTTCAGAAACCTTAA ATCAGACCTATTTTAGGCGATCTAGAAGGGCTAAAATTTGTACAATTTTT CACTTGGCGCCAACCAATAGCTCCTTCTTAGTCCCCATAAGAtggcccta tcactttcaaagtggagTCGTGGCCCCTGCGCTATGAAAACGCGATTGCA GATTATGTCACGGGAcaattaaaaaatgttgaacATTTTAACATAAATAC GTGGTAATCAGGCTATAAGCCGGAACAGAGGCTAATTGTTGTCCTTGTTT TTAACCAAAAACTGATCACTcgtttacatgtttttttttacaaaaaatcc aaagattctgaagccttcggatgttcttaacttttttagtttaaaggtca aaaattgttcttattttccccattttttgagtatttttgcccattttccc aAGAAATAAGATGTTTTCGAGTTCACATagccttacaatgttcttaacct atttccttaacattttggccatcgaatccttatgttcttatatagtttgt tcttattttgctaTTGGGAATTGAGATATTTATGAACTAGCTATACAAAC TCTCATGCAAAGATTTCCTTagattttgtgagtatttttggatattagtc cacaaagccttataatgttcttaacgtattcccttaatattttggccatc gaatccTTATGTTcgtatatagtttgttcttattttgctaTTGGAAATTG AGATATTTATGAACTAGCTATACAAACTCTCATGCAAAGATTTCCTTaga ttttgtgagtatttttggaTGTTAGtccacaaagtcttaaaatgttctta acgtatTTCCttgacattttggccatcgaagccttattttcttatatagt ttgttcttattttgctaTTGGAAATTGAGATATTTATGAACTAGCTATAC AAACTCTCATGCAAAGATTTCCTTagattttgtgagtatttttgggtatt agtccacaaagccttaaaatgttcttaacgtattcccttaatattttgac catcgaatccttatgttcttatatagttcgatcttataaaaaacgtgtat tcactAACCTTTAGATAAAGCatcaaaagtgacgaaaaattTCACCATCG TCAAATTATCGACATTTTCCGGTACCTGCTGCACCATCTTCAAATTACCA GCACCTGAAGCACAGTGTAAACAGACCTTTAACATTTTCGCATACGATGT CAATAAAACCTTAATCATGACAAAGCTGTATCATGAGGAGAATCAACTGA CAAATTGTAATGATAAGGCCTTGTTTAGACGGATCAAATTTGCAAGGATA CAAGCAGTTAGTTGGGATGGGCAGCTTGGTGAGATGTCTCAATTCTTTCA AACAACAGACGAAAGACAAGGTAGTTTTAAGACTTCGATAGATAcaccgt ttttttataagaacatccaaattttttgaaacctttggatgttcttaagt tttttagtattaagcctttaaatgttcttaacatgttcttattctcttca ttttttgagtatttttgtccatttcccacagaaattgggtgttttagagt ccccgaagcactaaaatgttcttaatttgttcttaatattttggccatcg aagcctaatgttcttaaatagtttgttcttataaaatggcGGCCTCGTCA AATGGTTTAaatacttcactggactcagcatcatgtaaattatcaaaaaa gcaaaaatcagcaaGAAGTAGACTATAGTCTAATAAAACCATTGAGTAAG TTTACCCGCcgtctttgatcggagtttttttgaaaggtaCCCACAAAGAA GGCAATACAGTGCTACATCATAAGTATCGAAGCCcccaagcggtttgcgt gaatgcatcGACCTCTAACGGGAAtgtgtgaatgggctttttcattTGCG TAAATgcgtaaaaattacaaaaaaaagcaGCGTGAAGCAGTGAATTGGAA AATGTTGCGTGAACAGAAGTTgtgtgaattttgaaaattgtgtgAAGgcg tgaaatttgaaaaagaaattgcgtCTTCGTCGAAGAGAAAATAGATCTAA CGCTCTCTCCGATTAGGGGTTTcccttttgaaaaagaaatcgaTCAAAAT TTTAGTTGGTTGGGATTGAGACTACCTTCAGACACCCAGTGTTTATCAAC AATAcaatgaatgaatttttttaatcttgTTTGCAGTGGCTGAACCACCA AAACCCAAAGAAACAAAGGCGACGAAGATAAAAAAACCTCTATTTTCGCA CACAGTTATAATAATCCTCGTTGCCATGGGAGCATTATTTGTTGTCATAG CTTTGACCGCCATTTTGGTTTCCAAAAATTGTCACGGTAAGTTACGGCAG TTTTTTGAGGAGCATATAAAAGCATTGGTGGTCTGATTAGAAAGCCAAAC GCTACTTAAAACACAAtgctaatttttttctaaaggacTGGCTGTAATTT TCAGGCTTTTTAACTATTTCTATTTTCGAAATCTTCTAAATATGTTAACT TTATCTGTGCTTATCGACTTATTTCGAGAAAACTTAATATgagatttttt gtttctttgagcGTGACCGTGATACAGTAGACtccctctaattcgaacta ctgctactcgaatctttctataattcgaatttatTCTCAATTAACATCAA GAAGAAATCCTTGCAAAACGCGATTCGAATTTTCTGTTGTTCTCGAATAG ATTGGACTACAGTCGTCTCTCATTAATTCAAACTCGAACCCGGAGTCTTA TTTGTTCGAGTAACATTTCCTACCTAATACAgtacacttttcagcaaaaa cacGACATCTATCCCTTctggctttataaatctatggtctcATCGGTTCt ctgagaagggggtgtttaacTGATTATGATAATgtctttaatattttttt cagttgaATAGTAAGGTGACGAAATCAAGGTACAAATAAATGTTTACTGT TGACTCTTGCTAATTCAAACTCGAACGgagaatcttatttgttcgaataa cagagagactcgaattatagagagtactTTGTGAGGGTTTCTCCCTGACG GGAACtgagaataagttcgaattatagagagatttgaaaaatataggtTC GATTCAGCGATTTGAAGCGAGTTTTTAAGCATGAGTGAGTAAGAGAACCT TTATTGTCTAGGATTGAACTTTCCTTTATTGAATTACAACCTGCTAGCGA AAAAGTTTACCAAttctttcttaatttttttaggaaagaaaaatgcaaga gaaaatgaaggtaaaaaaagttgttttccaACTGAAGCGAACTCTCGACC AAAAAACATAAAGTTCCTtgaagggctctgaccatagtggaTTTGTTTGa tataaatttctacttgatgtagcacacaaaactgtggcatgttatacatt ttctgttaggtgAATTAtccttgaatctgaaaatttgagaatcacaatga aaaagattgatgaagaagaaaatgaagacttttgcaaacGAAGAGTactt caactttgaagagcttattttcggcgaagaaaaaaaacattttgaataat tttttgcggtagatggttgTATCTTTAACCGaacttaaaataaattttcg gaaaatttttctaaaagcttatttgtctcaaaatcttgaaaatagtgctt tttgaccaatttttcatcccaaaacagccataacttttgaaattcgTTAA AAGTggaacttttatgttcaaataataaaatcaattttttcgactatggt cagagcccttaagtcgTGATTCGAACTGTgattaaaaaacggattttttt ttgaaactttcaaatagATAATCATTCAGATGGTTCGAGATCTTTGGCCT GTAATTTCTTTCCAAGTCGAAAAATTATAATATGTCTGAAAATTGGGCTC TGAAACGGTTCTTGCGCTTGAATGGGTGGTGGGTCGACTAAAGCTGAGGG AGAGTTTTTATGTAGTGTTTATTTATTTGTCTATAACAAGactagcgacc acactcatagaaaaaaatctaaactaaggaggtggtCGCAAAATTGTTAA GTTACAAGAAATAAATACacagaaatttttataaaaacatgtacCTATGT TAATGTAAGATATAAATGAATCTACGGCTAGAATAggtaatttgataaaa ataattagaaCTATTGCGAGCAGACCAGAGCAGAATTGTATTTTGTAACT TGAATATCTTAAGATAATAGTTAGACAAAAACATTTAGAGGTTTGAGATG GAATCTACAggcaaaaaatctcaaaccattTGATCATCTCTTACTTAGTA TGAACATGAAGAAGAGAATGttatactgtaagttggtctaatatcgacat ccttcttctaatttcgacatccttctttagagataggaataataggatgG TTCCAGTCGCACTACACATCTTTGTTTAACAATCAGAGAGGAAAAAAATC TTTCGAGCATCACCAGCATTTCCCAGCTCTTTATTATtccagggtgtcga aattagatgaAGAATGTCgccattagaccaacttacgttACTTTACTTTT AGGGCAAAAACGACCAAACCCCTGTAGTAGTGCCATAATTTCTACTCAAA CCCCTACCAtaaaggaactaattttcgcggtgcGAGGGTACTAAATTGGC ACATTTTGCGGTTGACACCCACTTTTTgcggaaattttttcatttttcta ggaCGTTCTAaggatttttagtaaaaatcacatttcgcggaactaatttt cgcgataGACACCCAAAATCGTGAAATTGGTttcccgctaaaattagttT TCTCAAAATGACTTCCCGCAGAAATAAGTTCCCCGTATACAActctttaa tttcttttgacAACAGGACACCAAAGGACTGCCACCATGAGCTACACGGA ACTTAACACAGACGTGTTCACTTCAGGAGACGAACTTGCCTACCAAGGTC TCATCCAAAGTGAGCACAGTTACGAGTACCCAGACTTGGATAAAAATCCG ATACTCAAAAAACCCGCCGACTACGAAATCATGAACAGCGCAAGGAGAAG ATCACCTGGGAGATCGAAATACAAAGTTCCCCGATTCCACGATCGGGTTT ATAGCGAACCGGAGCTTCCGAAGCAGAAAGCTATGATGGATGAAAATCAT TCAGATGAAGGGACGCCTTATAAGGAGAGTGAAAACGAACTGTATGaacc ttcagattatgaaagTTGCCCCTCTCCTAACGAAGCAACAGATTGTGCTG AACTTATCGAGCATGCAATCTAATGACCTTTGAGAACTAAgtccatgttc gcacgtgacgggtccgtttcgctccgaaacgaaatgaagccattacattg gttagaagtgacgtagcACTTGAATgcaaccaatagaatggcttcttTTT GTCTCgaagcgaaacggaaccgtagcgtGTGAATGTGAACGTCGTCTAAG AAAAAAGTCATAGAGACTTAAAAAGCATAAAGCTTTTTATTTTAGCTTTA TTTCAAAGACTCTGtctaaactttcaaaatttgaccaatcaaattgattt gaaagttgagcaatcttttcaaaacataaaacaGCGTAAAAACTGTAAAA GACTGAATTGAATACCAAGCAATGAAAGCGCCATCAAGCCATTTGTCGTT ATTTTTTGCCGACGAGTCTTACAGCGATAAGGTGACGGCAGCCTACGATA TGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017989TCONS_00017989Clytia hemisphaericatranscript
TCONS_00017990TCONS_00017990Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017989-proteinTCONS_00017989-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:315807..324810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.22 0.08 0.06 1.09 0.76 0.59 0.91 0.46 0.36 0.43 0.19 3.73 3.45 0.6 0.64 0 0.09 14.06 11.97 0 0 0 0 1.27 0.65 0.05 0 0 0