XLOC_009803 (gene) - C. hemisphaerica

Overview
NameXLOC_009803
Unique NameXLOC_009803
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000269:110750..114900-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009803 ID=XLOC_009803|Name=XLOC_009803|organism=Clytia hemisphaerica|type=gene|length=4151bp|location=Sequence derived from alignment at sc0000269:110750..114900- (Clytia hemisphaerica)
TTTATTTTTAGATAAAAAATACATAGCAAAAAATTAGAATAGAAAATACC TGGAATTTGTTGGAAACTTTATATTTTAAAATGGTAAGTATTTTCCAATG CTTCGAGAAAAAGGAGTCAAAGCATCCTTTTATCTCATTTGCTTTTTCAA ATTTTTAACAATTTAGAAATGATCCGTCTCAATTGCTTCAATGATATGAA CAAAGTCTTCTATGAAATTTTTTAATTATTGTATTGATATAAAACCTTTT GTAACTGTGTTCATTGATCATCCGTCGAAATAAATTCAAAATTTCCTCTT GTTGTTCTTCTTCCAGATTCGTTTCATCTTGATCCAAAACAGAGCTGGTA AAACTCGATTAGCCAAATGGTATATTCCTTTAGATGATGATGAAAAACAG AAGTTAATCGAGGAAGTTCACGCTACAGTCACCGTGCGAGATGCTAAACA TACAAATTTTGTCGAGGTCTGTTTTAAAATGGGATGCGAATAATTTTAAT GTTGTTGTGATTGAGCAACCAAAAGCTCTTATTTTGACTTTCAAGCCTAG CTTGCATATCAAAATTTATNAAACCTACATTTGTTGTGATTGAGCAATCA AAAGCTCTTATTTTGACTTTCAAGCCTAGCTCGCATATCAAAATTTATCT AAAAGGATTTTTTTATAAAAAGTAATTTTTCAGTCAGGGAAAAACCGTTA AAGATAGGGGACACAGCCGTTAAAACCTATTTGTCCTTTGTGTCTGTCTG TTGTAGCAAAACAATTCTCTTTTTTAAGAATTAAATTGGCTCAACTTTCA TCCATAAAATATCATTTAGTATAACCATAAGGCTCCTTCCCTTTCTTTTG TAGTTCCGTAGTTTCAAGATTGTTTACAGACGGTATGCTGGTTTATATTT CTGCTTCTGTGTCGACGTAGCTGATAACAACTTGATGTACTTAGAGGCTA TCCACAATTTCGTAGAGGTATGATAGAATATGCTTCGTTTTCTTACTTTT TCTGTTTTTCAAGTTTTGTTAAGATGGTGTAAAGATATTTTACAAGAGCA GTAAATAAAGATTCTTCTCTGAAAAGTTAACCGTTGCACCAAGAACGTTT TAAAACACGATCCATCCCTTTTACTTCATTTCGATTGCTTTATTCTTCCT TCTTCACACAGTAAATTATAACCTGGACCTAATCACTGAACATTCAAATT GTCAGCAGAATTTCATAGATCTTCAGAAAGCATACTGCATACAGCATAAT TTCATTATTTTTATCGAGATAGATAATTCGAGTCTTTATGCTTCTTTAGG TATTAAATGAATACTTCCACAACGTATGCGAATTAGATTTGGTGTTTAAT TTTTATAAGGTATGTACTTCTTTTATGAGTGAATTAACCTGGGATTTAAG TTAAAGTACCTCGATACATCAGGCGAATCAGGATATTGTAAACATGCTGT AGCCATCTTGTTTTGTTTGCTTCTCTACAACAAATAAAGTACAATATAAG ATACGTGCGTCCCCTCACCTGCTAGAGCATATTGTACTTCAGCTAGTATG CGTATCAACAATTTATTTTCATGATTCTCGACAAGGAGCTTTAGTTATTT AGCTAGAGGATCAAGTTCGTTTTTAAAGGGAAACTGCGTGTGATCTCACA CCATTGAGTTTGCGTAATTCACTCACTTTGCCTTTTTATTTCTTATATTA GCGTCCAAAATACATTCCAATTGCTAAATTTTAAGTAATAGTGTCATTAT AGAGAAATTACTTTTAATTAGTTAGTTGTGAGTTTAATATCGCATAAAGA CTGGCGCCTGAATGTTTCTAAAGCCACAAAACTACAAAACTGTATAGTAG ACCGACCAATAGCCCACGCGAAGCCCATCTTGAAGCTCTCGAATTTGATG AAATATTCAATTTGTTGTTTTGCAACTTCTCTATTGCATAATGAAAGCAA AGAGATAAACATTCTTTCGGTTTCACTTTCAATTCAAATATTTGACCGAC TCCTCTTCAAAGAAAACGTCGGTTGCGTATGACATTTAGTTGTGTGGGTA TTTCTTTTGATTGGAGTAATTTAGAAATACCGGTGCTTTAATTGTGGACC TAAATTTTCACGATTGAGTCATCGTTTACGATACATAAACCACATTAAAG TGATTCTAGTTTCACCACAAAACTAAAAATATCCAAATTAATTTTGTCTG GATAATACAAAACATCGACCTCCTAACAAGTGCATGATTTCTGATCTTGA AAAGAATTCTACTGTCTTATGAGATCTTTTCCTACGACGATTAGTGCTGT ATTACCTTGACTTTTCCTCAGAAAATGTCTTAATATAATAAGTTTCGTAG GTAATAGATATCTCACTAGCCAGGACTTTACTAATGTGAACTTCGAATTA AAAGCCCCTAGCTTACCGAGAAAGTCGCACCTAAACCGCTAATATATAAG TCTGTTTATTGGACCTACCTAAGGTAGTCCCCTTTAAATTAACCCTTGTC CGTTCGTTCGTTCGTTCGTCCGTTCGTTCGTTCGCTCGTCCGTCTGTTGC CAGCTTTTCTCGGGATCGGCTGATTAGTTTTTTCTAATTTTTTGCACAAT GATGCAAAATGGCAATGCCCCAAATGTGACGGAGCCCGATTTTCGAAAAA AAAAATTTTCCAGCCGAAAATGGCGGAAATATGCCGGAAAAACTGGTTTT TCGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCTCA AAGATGCGTATTAACAATGCCCAAAACATGGCCTAGTCCGATTTTTGAGA AAAAAAATTTTCCAGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGAT TTTCATTGGACTTTTTCCATATAATTGGTTGTTTTTTCATTCAAAAACAT TATTAATAGCAATGCCCACCATCAAGCATGTTTCAATTTTCAATAAAATT GATTTTTGAAGCTGGAACTTTCTAAAATTCGCCGGAACAGCCGATTTTCG CCGGAAAAACGGTATTTCTTGAATTTCTTTATTTTTGCAGATTTTCATTG AATTTTTTCCTTATATTTCTATGTTTTTCACACAAAAACATTATTGATAA CAATGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGC AACCAGAACTTCCTATTTATTTTTTCCCCTACAACCCTTCCCTCTCCCCC CATCAACAATCAATGATGAATTTATTGTGTTGTGTATTTTCGCTAAACGC TATATTTTCTGACTGATTTTTNTGACTGATTTTTTTTTCATTTTTCTTTT CGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATGTTGC TTGTTTTATCTTTGTCTTTCTGTTATATTTGCAGGTCTACTCAGTGGTGG ATGAGATGTTTTTAGCTGGTGAAATCAGGGAGACGAGTCAAGCTAAAGTT CTGAAACAGTTGCACATGATTACTACACTGGAATAATCATTCGGGAAAGT AGACCCTCTAACTCAAACCTAGCTTATCTAAATAATAGTGCACTAGTCGT CTTTTAACTGACCGAACTTAACCGAGTTATCTTTTCTGACATTCAACTTG AACATTTTCTGCTTTTTTGGGTCATTAGGATACATGTTTATAAATCATTT TGGTGTATTTACCTTTTTTCTATCATTTATGGGTTTGATTAAAGAGGGTT TACTTTTCGACCCTTTATTTGACAGGTCAACTTTTTTTAACCGATCCTCT AAATTAAAAAATTTGTATTTAATTCTTTTTTTTAATTATGTCGTTTCTTT TTGTCTATGGGTTTATTTTTTTGTTATAAATTTTTCTAATTATTCAGGAA TTATTACTCGCTTTTTGTTTGCCTTTCAAAGGCAAATTTTGGTCAATGTT ATGCTTTCTTGACATTGTAAATGAGGACCCAACTCAGCGAAGAATGCTCT AGATATCAATTACACTTCCAAGCATTGTTTCATTCAGGTTGTAATAAAAT CGTTAATGTGGTGTGGTGATTTTTTAGCTTTCCTGTGTTAAACCGGTAAC ATTGTGTATATATAGGAATACTTTTTGAAAAGGAAAGAAATCTACTATTC TACCTGGTAATTACCCCGTTATTCCATAGTACAATGATCCTTTTGTATTC A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017543TCONS_00017543Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017543-proteinTCONS_00017543-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:110750..114900 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AP2S1PREDICTED: AP-2 complex subunit sigma isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
144.96 147.35 125.21 123.36 76.8 60.88 127.43 123.06 130.03 109.37 82.99 85.89 60.15 55.13 87.3 90.87 96.73 101.67 52.88 64.37 92.63 89.26 83.13 76.11 49.38 57.1 98.86 75.11 73.65 67.48