XLOC_009613 (gene) - C. hemisphaerica

Overview
NameXLOC_009613
Unique NameXLOC_009613
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000260:292011..297613-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009613 ID=XLOC_009613|Name=XLOC_009613|organism=Clytia hemisphaerica|type=gene|length=5603bp|location=Sequence derived from alignment at sc0000260:292011..297613- (Clytia hemisphaerica)
AAAAAAAGTGCTTTATTTTGGTTTTTCAATTTGTAGAGGGTCTGTAAAAC
TGATTTCAAATTAATCTTGTCTCAAAAGGAAATAAAGGAATAATGGCAGA
TGCTGCTGCAGAAGCTGCTGTAGAGAAAACTAATTTTGATAATATCAGTA
CCTCTTCTGGTTCAGAAAATCTAGATTCTTCATTCAGTGATGTTAGCAGT
AAGTATTTTTTGGTGTTTTTGTTTAATAACATCATTTTACCATAATCATG
TAAAACTCGTCAGAAAAATCAGGAATACTTTCTTTAAACACATGCAAATT
ATTCACTCGACAATTTCACCACAGCACACTAATATTTATGATTAATAAAA
AATATTCAAATCAGATTTATTTGTGAAAATAATTATAATTATATTTTTCA
CCTTTAAAATAGCACCAGTGGCGGTCAGAAAAGTGGAACCACAAACTTTA
GAAGAATCTTGTGATAACATGGTTGATAAAATTACAGATTATCTCAACGG
TGAATTAGCAGGTAAAATTTGGGATGATCCACGTGAAAACTCATCTACAA
ATTATAATTGTACTCTATAATAACCAGTAAATGTTTGTTGAGGCTCAGCT
TTTTGGCACTTGAGTCTCAAATAGTTCTACCCTTTTCTTATATTGAAGGT
TTTATTTTTAAATAAGAGTGATATTGTTTACTCGCTCATCAATTTTAACA
AAAAAAACTTTAAATTCTTTACCAAAAAATGGTAAAGAATTGCAAGAAAT
AATTTCTTTTTCAAGAATTCATACGTCTTTGTTACACTTGTAAATTTCTT
AATCAAAAAGACTTGATTAAAAATTTCAGAAATTTTGAAATCTAGTAGTG
CTAAGGACAAAGAAATTCATACAGATGTTCTCCATTATGACACAATCTCC
CAGGAAGGAAAAAAAAATTGCTGACTTCATCCAAAAAGCTATGACGTCAT
TACAAAGGTGTAGTTTATATGGCCGTTTTTTTGCCGTGTCAAAAAAGACA
AAAAAGTGGGTCGTTTAAACCAGTGCCGATCTTTTGCCGCACTTTTTAAT
TAAGTTCGGCAAAATTTGCCTTGTTCAATTGTTAAGGTCGACCTCAAATC
AAAATTTGATTTATATAGAAGCTCTTTTGCTGCACTCAATTCGACTTCGT
TTTTTTTATGAAGTTATTTGAATTAGACACGACAGAAAACCGGCCATATA
AATTTCCACCTGTCGGAAAAAAGCCCAAAATATATGGTTTATAAAAATGT
CTCTCACAGTCGAATTAGTAAAACAAACTAGATTCTGTTTAAAGATTTTT
AAAGTTTTTATGGTAAATAGAAGTGGCATAAAACAATGATAATTCAAAAG
TAGTTGGTAACGTTACCAAACAAAAACAGTATTTTTGTGATAAGTTATTT
TTAATTGTTCTTGTGGAGATAATTTTCATCGAAAAAGTCTGATGTTTTTT
GTTCTATCAAATTTACTATATAATACTTATATTTTTGGATTTAGCTACCT
CTGCTGATTACAAATTGCTGGAAAACTTAAACAAGATGGCTACAGAAAAA
TATACGGACATGTCCAAGACTACAAACAACCTGATAACTAATATGGACGA
TATCAATGAAAGATGTATGTTTTGTTTTCTTACTTCATAATCTGTCTGAA
TGCTTCTTTTTGGACCTACCTAAGGTAGTCCTTTAAATTAACCCTTGTCC
GTTCGTTCGTTCGTTCGTTCGTTCGTCCGTTCGTTCGTCTGTTGCCAGCT
TTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAATGATTGTTTTTCTCCTTATTGCTATCTAAGTTTCATC
ATCAGGTAGGTCCATTCAGCATATTGCTTGTTAAAGTTCCTTTCAATTTA
ATTCTCAGTTAAATTGCAAATGCGAATAGATGTTTTTCTTTAAATATAAG
TGTAACGTTTATATGCATTCTAAGACCTGGGATTTGGTGAAAAATATGCA
CACTAAGCACCAGTGAGCTTATGGATTTTGAAAAGATCTTCTGTCAAGTA
TTTACACTAAAAAACCAATAGCATAATTCCAATTTGAACCTAATGAAACT
CTTAAAATAATTCTTGTCAAGAATCTACCGAAAAGACCAATCTCCGGAAG
AATAAGAATAACTGTAGCATAATTTGAGCTTGATTCCAAAATACAGCTAA
ACATAACTGAGCCTGTCTTTCAAAAAAGATATGCTTATTAAAAAAATGTA
ACTTTCGATAGAGTTTGAATTGAATTGCAATTTTTTGCCTGTTTAAGTGG
AGGTTGGGTTCGAGTCTACCACGATTGAATGGAAGCCAATTGGAAAGTAT
TTGCACCCTGATTGGATTAGATTATAAAAAACTGATTTATCATTATGGAA
AATAACTTGGCTTTGATTTTTATTATTTTACAGACAAGGCATTGGCACCT
TATTTACAACAAATTGACCTGTTAGAAGAAAGTGTTCTCAAGTTGGAACA
AACTGCATACAAGTTAGACAGCTACTCTAAACAATTAGGTATATTTGTTG
TTAATATTATTCTTGACTTAAGGTCCATCAGGTCCAAAATACACAAAATC
TTGTTGTTCAGATTTGGAACTATAAATACGTTGTTATATAGTTCGAGTTT
CGATCTAAATAAGAACTTCAGAACAAAGCTCTGTGGTGCTATTATACCTA
TCATTCTCAATATTTCTTTTCACCAAAACAGATCCCTATAATATTCTGTG
TCTCAAAGCTCTTGTGGGCATGGAGGTTGAAGTAAACTTAAATGAAGATG
AAATTTATAAATTCTTTTTACCTATTTTCTAGAAACGAAGTTCAAGACCA
TGGAAAGGAGGTGATTGTCTCTGTAGTAATAATGTTGTTTGGTTTGCTCT
CTTTAGCTGGGGCTTCAATAGCTTAATCCATGTTCAGCAAAGCCAGACAT
CAATGAAGCGTTTTTCTTCACATACAAAAGTTTCCTGTTAGTAATACAAA
AAGGGGTCACAGAATCACAAGTCTTTTGAACGAAGGAGAGTCTCCGTCTC
GCAAAGTTTATTTAATTTTGAATTAAATTCTAAACTGAAACTTTCCAAAG
AGTCTTTTCTTAAATTGTCTGTAATTTTTGACTTATTTCAACTCAGACAT
ACCCATATCTCACAAGCTTACTTTCTGTATTAGGCTTCAAAGGGTGTGAA
ATTCCTATTGTTATTGTTCTAGAAAAACTGATTTTGTAAATATATTTCAA
GTAAATTAATTAATGCAGGTCATGTAATTTATAAAATTTTTGAAATATTG
AAAATATTGCATTTTAAATTTGTTCAATCTTTAAAGATCATCAACAATAA
TCTTATGATTTTTCTTATATCCATTGGAGATCAAAAATCTCTGCGATAGC
TTTTTTTTCCAATTCTTTTGTATGGTAAATAAATTAGTTTAAGACTAGTC
TACGTAAATAATCGTATCAATGTATGTATCGCTGTTTTCTTACATGTAGA
AATTGCTTTATACAATGATAATTTATTTAGACTTTATTAAGATATTCTAT
TTTTGCATTTATTTTTTGTTATTGCTCCCATTTTAAAGGATGTCAGCATT
GGGGCAATTTTATCAATGAAAAAAAAATCTAATTATTCATTGATCTAAAC
TACCAACATTGTTTAAGAAATAATAATGCCTGTACTTTCAGGTGCCGAAT
AAACGTCCCCCGCTTGTTAATTTTTCGATTTTTTTTCAACCTCCCCCCGG
ACCTTATTTAGGTCCATTTTCCAACCCCCCCGGTAATTAGGTCCCCCTCC
CCGTTTATTTAATTTGAAAAACTTTTACGACCCCCTCCTTTATTTTGACC
CCCGGTTTATTTGGCACCTGAGAGTAAGTAGTAATTTGTAATAAGTAGTA
ATTAAATAATCATGAAGAGTCCTAAATTAACAGTAATGAAATAATGTTTT
TTTCTTTTGAAATTCAAAGATGATTTTTGAAATATTCGAGGGGTGATATA
GATTTCCAAGTTAAAGAATATGTGCCACCAGACTTTCAATCCTTATCATC
TGTCAAGAGCCTAGGTAACCCCTACCTAAATTAGAGAATGCTCATTTTCA
CGAGGTTCTAGTGAAATAGTTCTCACTCCGCCGTTTGAAGTAAAGCAAGC
TTTCCATAAAGCTAGAATCTTTTTTAGTGTTGCTCTTTCCTTTTTAGTCA
ACTACCATTAATAAACAAACAAAATATTAACTAAAACTAATACAAAATTA
ACAGTTCTGGAACCATTGTTGGTAACCATAGCAACCAATCACCATGTCAT
CCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017193TCONS_00017193Clytia hemisphaericatranscript
TCONS_00017192TCONS_00017192Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017192-proteinTCONS_00017192-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260supercontigsc0000260:292011..297613 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.66	42.61	22.23	18.23	37.38	24.95	47.33	53.56	46.06	53.47	32.37	39.76	32.76	31.79	35.72	46.01	43.11	46.41	16.81	23.7	35.21	29.41	61.81	58.77	56.57	57.84	28.03	16.42	41.77	42.52