XLOC_008620 (gene) - C. hemisphaerica

Overview
NameXLOC_008620
Unique NameXLOC_008620
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000211:297300..305936+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008620 ID=XLOC_008620|Name=XLOC_008620|organism=Clytia hemisphaerica|type=gene|length=8637bp|location=Sequence derived from alignment at sc0000211:297300..305936+ (Clytia hemisphaerica)
TACTTTTGCAGAAGTTCTATTCTAGGCAGCCAGGCAATCTTGAAGGTATA ATCATTATAAtatgatattttgatatttcagtGCTCGAAATAACGTTGAC ACATTTTAATGCGTAGTTATTATCAATCTGGATAAAGTGTGCATTTagtt agtttttcattttttacagtacccagacgatctcaatcgaacggaatcga cgatcgaaccagtcgaaccaaatcgaacgcaatcgaccgattgaaattcg attgtcgaacgcaatcgaatctcagacgaatattaccgcaattttcagat tcgattgatattcgattgcgttcgattgatgttcgattgagttcaattgc gttcgatcgtcgattcattgacccccggactgttcatcgcataatttcta cgggaaatcgaaagtaatttcatttggcttgtgatgtttgagagcttgga tgttgggaagctgcaagaataaagctagacgatctcaatcgaacggaatc gacgatcgacgaaccagtcgaacaacaatcgaaccaatcgaatattatcC AAAaatttgacgttcgattgagattcgattgcgttcgacaatcgaatttc aatcggtcgattgcgttcgatttggttcgattggttcgatcgtcgattcc gttcgattgagatcgtctggcagTACATAGTTTTATATTGACATTTTGTC TGTTTGATTGAGAACCCTGTTCCACACTTTGTACACTTTGTGTCAAAATT TAGATTGTAAAGAATTCTTTAGATATATTTTTTAGGAtcttttattgaca aaattgtACTTATTCGtccttttgaacaaaaatattatctttgatatgtt ttttttcaaacaacctTTCCTTTTTGTACAGACCCGGGCCTTTTCTATGC TGGATGGCActaggccaggcccaattgattgtttggtttgtgtcctagaa gctttgaaaaatgggtcAGTCGGTCGgaaccttttttttattttcaaaca aatCGTGCAATCCTctcagttgggtgtttaagataaaaactgcaattatt gctctttttggcAAAGAAATGCCGCGTCAGCAAAATATATTGTCCttata agggcaaagatgtcaaaggtgtttgaaaattgtgaaattgcATTGAGGAA aaggtttttcagatttttaaaagtgattttttcaattttttgttgctCAA TATAATAGACAGGCAGCTGTTGtgatgacatcaaaaaaagtgaataagtG AAAATTTGAGAGACAAATGTTGAgtacttattttgaaatctttatagttt agtttagagagtcagaaaaatttacttGGAGTGTTTAATAAAAATCTTTA CTGGACGTGTCTGAGAATAATTTattgattgatgacgtcacaagcagtta catcaatatcaatatgccaaaaacattttgttcaaccaccttcacttcaa gaaaggccaccatagaatgaacttccttttataggatgaaccatattcat gtggctttcagccttgcactctatcacagagcctatttgagatattttac taactagcccagagaaaattttttaacctttattatttgaatgcatgcct ttgtaatactcaaatataaaaaaattaaaaatttttaacttggtcattag tcaaaaaagtcattaaaattgattagcctctgcgatggagtgcaaggctg aaagccacatgaacatggttcatcctataaaaggaagttcattctatggt ggcctatcttgaagtgaaggttgttgaacaaaatgtttttggcattttga tgTATATAACTGacaagcaaaagtgaaaaattgatgttgcaaaatttcaa agttttatataccatttgaagcgttttttgatgtagatttcaaatcacat caatctcaataagtaaaaatttgaatatgaaaagttattgaggtccgTAG CTCTTCTATGAcgacgtcatttttgaaaaaatgtctcATTTACAatctca attttctcgagttaggctGAGAAATCGAATACTGTATACCCGTTTAattg tcttctatatagtttttaatgattttttgaaatttcgacatggaaaaaaa gtcagttttttggaaataactttcgaactactttttcaaatttaatgtat gatagctcaaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNta tcctctatacaataaaaaaagaatgaacaaaaaatttaaattctgaagct cacaatatctcgacaaagttgtatacttttttttggtgcacccggtatat atcattattatatgctgaaatctaattttcacttttggtggggacgtcat catttgacaaattacTACCGGACATGTCCGTTGAATAAATTTTCTCACCA ATCGGCATCTGGTCATTTTGTAGTCATATAAAAACCTTTATTACATGATT GAactataaaaacaaacaaaagaaagcCTGAGAGGATGTTGAGAATTTAA GGTATGTGTAAAGTTAGGTAATCTGACGAAAATTGTGGTTTTCAAACTGA AAATCTTAGATTGAGATTAGTAACAAAATTGAGATTGAACCTTATAATAA TAACttatgaaattttaaatatcttgaaatacaaacaataaaatgttaaa ttaagattataaataataaataaatataatgaATAAATGTAGTAAAAACC TTTTACAGCACAATATTGAATAGAGACATTACTAGAAAATagttaatttt tcctaaaatgTTCAATATATAAGTTTAGTTCTGAAGAGATCCTCTTTTGC AATCTTTCTCAAATCAGTTGGTCAATTATTCCACCATTTTGTGGCTGTTG GGACAAACGAGTTTGTATATGCAAGAattctgtcaatttttttgctggag TTTAGTACCGTCTCTAGAATGATTTGGTAGCATACTGAGAGGAATAGCAA TTTTCTTGTGTAGAATTTTATGTAGCATGACAAGGCTTGAGATTTTATGC TACAGTGCAATTGAAATCCATTCAAGGTTTTCAATCATTGTTGAAGGACT TGAATTCCAAGACCAGTTGTTGTTGATGAAACAGGCTGCTTTACGCTGTA CCATTTCCAGATCAGAGCATAGACCTGCATGGAGGCATACATAACAATTA GTAGAACATAAACTTTGAATGCCTTGATTTGTATGTTCTTTCAACATCCC CTCAGCATTCTTTTACGATGTGTTTACCCCATTCTGAGTCTTTAATGGAT TGTAACGCCTCGGTATTTTGCTGTTTAACACTTTCGAGTGTCTCTATGTG GATTGTGTATGAGGTGACAACTggtttgattttgtttgttattgcgagct gtttacatttttgaggGTGAAATTCCATGTCCCAGTTGTGCTCCCAAATT TGCAGTTGATTCAAGTCTTCTTGTAAGATCTGCATATCTAAAATTGATTT CATAATTCTGTCAGGGGGGGTTGGTACTAAGCTGTGGGGGCCAGTGCCGT GTGGTGGTCTgataaggtaagtaaaaaacaacttagtacATGGTACTAAG TTGTTGTtctaattgaaaaaaacatttttgcaactttgTATCAAGGGTCT AAATGGTGGTCTCAATACCCAATATGAGGCATCAAGTTAATATCTGTTAC TCAAAATCctgcaaaatcacaaaaaatgttctttcacTTTCTTCTCTTTC TCTTGTTTTAAGTTCTGATACCAGATTCTTCATGTAGGTAATGTCTTTAT CAGGTGCCAGGTGCCAGGTGGACGATATATGCTACAAACAATTACCAGCT TCTTAAAGGTTTCTATTTTAATAGCAATACATTCTGTTTGGGAAGGATTA AAAACAGTATCTGTGATGAGAGATTTCTTTGCAAAAATAGCTACACCTCC CCAGCCATCTTTGCAATCATTACAATATGAAGCATATCCTGGTAGTTCAA GTTCAAGATTTTTAATCGAAGGATCTAGGAAGGTTTCTGAAGCAATAACA ATGTCTGAGTCTTCGTCTAAAAGCGTGTTACTGAAGAGTTCTTTTTTACC CCATAAGCCTTGGAGATTCACCACCATCAGAGGCAGCATTCTTGCTTTAG TCTTAGGAGTATCAGTGTCTGATTTTCCACTAGAAGCAGAAGATAGTATA CTGTCTGTTAACGGATTGTTGGAACGTATGGTTGCACAATTAAAGCCATT GCCATTCAAAATCACAGTCTTCTGCGTGTAGTGTAAATATGTTATCTGAC ATGTAGACACATTTCTTATGGAATCACTTGTCACATGTATCACAGGCAAT AGCATCCTGAGTCACTGCTTTCCCACATTCTCGGCATGGGTATTTAATTT TTCGCATCACGTTaagaagaaaattgataaatGGATAACAATGGAAGAAA AATGTATAAAGACTGATACCTGCTCAGCTGCACATGGGAACCCAGGTTCT GACATTCTCATATAATGCTTTCAATTTAGGATAATCCGGGAATGATCATT TCTTTTCTCCCGTGAATACCCCTTTTGCAGGTACTGCGTATGACATTTTG ACTGGCAAAGGTATCAATATCAGTAACACCAACGTTGTGCTTAATGAGGG TATTATCCCCAACGCCCAATTTTTCGATCTGACAATCGATCTGCAAGCCC ACCACCTAATTGTTTATAGCAGTGGGCTTGTCAAGAAGGAACCGCTCCTT CACTCGTTCAACGAAGAAGTGATCCACCTTCTTCTCCTTCTTGCTCTTTA TGTAAATGCATTGACCCATGAGCCAATGATGCTTTCCCTGGTGTTTGACG GTTGCTGACAACAAACAGAGGCTGCTTAAAAAGCTGCTTTATAAATGAAA GGAGAAAATTTCCGTGGCTGATCCATGGCCTATAGAAAAAAGAGGCAGGA CCAGTTAAAAGTGAAATCTTGGCTGTTAAAAAGCCGGTATTTTACCGCTT TTTAGACAATTGGTCTTGATTGGCCTTTTCAAGTGCTAAAAATTGCTTGG TGAGTCACCTTTCAACATATAATATTTACACAAATCAACTCTGATGTGCT ATTTGAAAGAATATATGTATTTACATTATATATTTGCTTCCCCCTCCCTC ATATAAGTATAAAGAATATCTTCTCTTCTCCCATTTTGTATAGTTTGTAT TGTTCAGAGGTGATTTCCCAAATTATTTCTATTCATTcagaaaatattct tttgtatttagaGAAAATTCAGTTCCTGatcctgtatttttgaaggatag ggtagttaaatactaaaatgggtgctatctatgtgttaaatgttgaaaaa atgttactacctgggtagttaaaactggtaaacttagcaaattttagcta tttttgtaattcttttaattttttggatgacttttctgaaaaaatctgaa aatttttaaaatttgaaaaagttttctgttggaaagttgtttgctgcaaa caaaaaattctcgaaattttttgtcaatataaaaaagacttgaattataa gggcaaaacattaatttttgcacttagtgaaaaatgtgtcacaaaaataa tcattttttagcttttttcgtaaaatcagtccgaaaagcaaccaaaaaat aggcagtctccatgacaaattgtcccaaaaactcttactaccagggtagt aaaacaCCTCTTCCAAGAATCcaggtggtggtatgtaaaaattggtaaaa atccttttactactcatatatgtctgagattttactaccaaCCTCCCCCC CTGGTAGAAACTGTCTTAGAAagaaaaaaggttaaatttaatTAGTTagt aggaaaattttttttttggaattcttACAAGCACCTTTTCATTGTCTCGT TAGCTTAAACAAAGTGCTCAAAAAAGCGCCGATGACACCTTTCTATGTGC ACATTTTTATAATATGTCATCTTTTTTATGTCAATCTATATAAGAATGTC TCAATTCAAATAGGAATTTGTGAATGTCTGATACTTGATATTGAAAATAT GTACTCATACTTTGATTAAGTACATATCCCTGTCTCTTGTAAGAACCAAA ATCATTCTTGACAATGGTAGGAAAGCTCTatattcaaaagttatagctat atttaaaataatattttttgcctCAAAGGAACATTTTGTCAATAGAATAA TAATTCTACAGAATTGTTTGCAAGATAAATTCTGAAACATGCACCAACGT GGTCTTAAACTGAATACACTCaattaagtttttttaacttttaatttgat gttcttataaaatcaaaatttacataAGTCTTTAAGATGAGTATTGAGTG TTTATGCATTTACAGTAAAAGTAAGTAGTACCGGGTGTGACACTattaag ttaccctctttgatttaatattgtaggcagtagagaagagatttttcaaa gattatcTCAGAATCATTCAGGGGAAAGCCTAAcataaaatttggtgtat tactttttaattttacttcattggttcaaaagttatgttcaaaaacctaa aatgccaattttaaaaattgtcaaaaaacaaaacaatctctgaaaaatct ttcTGCCACTGCCTGCAATATCAttatcaaagagggtaacttatttgtgg cacacccggtatattAAGTATTAAGTATGTTTTGAACTTACCCATTTTTT AACACGAAAAAGTTTTAGATTTTGTCAGTTTAGACATGCTGGatatttta aagttaatttcaAGACATTGTGCAGCACTGTGAGGTATTTTATAGCATAG CAACCAGTAGGCAGTAGGCATTTTTGACCTGCCCTGTATGTGAATATTTT GAATTGTGTGATTTATTAGAGAGTATGAAACAGGCACAAATATGcaaaaa acatcgatttttatttatttttattttttaatctctggaaatatttttga acttctttttctaaaattgttGTCCTACCTTTTGAGCTGCTGAGTTTCAA GTCTTTTTCTTGGCTATATCAAAAGATATGATCTGACCTTACTGACATGA AAACAGCTTTTCCAGTACAATCAATGTTACCTGGACCCATTAGGACCCTC TACTCCAGACCCTCTGAAATCAAAAAGCCCCTTAAAACGCTATTTTTACT TGTCTTCATTCCGTAAACTAGAGAAGAGATGTTGAGGAACAAAAAAGTTG TATAGAAAACTACCAACCCTCTAGGCTGCTCTAAGTGGTGCTACCCGTAC TCAGGATCTGGtatatttgaacattttttgttAGTAGAATATTGGTTTTA ATCTGACACAGAGATGATGTACCCTAAGTAACAATGAGTGACACTAAATC AAAAAAGTACATTCAAGTTGAAGATGTATTTCCAGAGGAAACAGCTCTCC TAGTGCGGGAGATTGGACAAAATGCAGTTTGGTCCTTGTCATCTTGCAAA GTTGGATCAGGCGTCAACCAGCTTCGTGATAATGACTTGACGACATACTG GCAATCAGATGGGCCGCAGCCACACCTCATCAATATACAATTTCCAAAGA GAACAATTATCAGTTACATAAGTATTTATACTGAGTATAAACAGGATGAA AGTTACACACCAAACAAAATCTCCATCCGGGTTGGCAACGATCCCCATGA TCTTCAACAGTTCGAGTTATTGGAACTGGATGAGCCAAGTGGCTGGATCA ATACAGAACTGTGTAAAGacaatcaaaatatcaaaactttcATGATACAA ATTGCTGTGTTAGGTAACCACCAAAATGGGCGTGATACACACTTACggca aatcaaaatatttggtCCAAAACACAATACTGTTGACGTGAAGGTCCCTT CCATAGAACAATTTGTTTCTGTTGACATGGCACAGTTCTCATGTATTAGG TGACGTATATGTTTACCGAAATCAATTATTGTACTGAGTGTTGTTTTTAT CATTAGATTAACATCNCAAAATGCAGTTTGGTCCTTGTCATCTTGCAAAG TTGGATCAGGCGTCAACCAGCTTCGTGATAATGACTTGACGACATACTGG CAATCAGATGGGCCGCAGCCACACCTCATCAATATACAATTCCCGAAGAG AACAATTATCAGTTACATAAGTATTTATACTGAGTATAAACAGGATGAAA GTTACACACCAAACAAAATCTCCATCCGGGTTGGCAACGATCCCCATGAT CTTCAACAGTTTGAGTTATTGGAACTGGATGAGCCAAGTGGCTGGATCAA TACAGAACTGTGTAAAGacaatcaaaatatcaaaactttcATGATACAAA TTGCTGTGTTAGGTAATCACCAAAATGGACGCGATACACACTTACggcaa atcaaaatatttggtCCAAAACACAATACTGTTGACGTGAAGGTTCCTTC CATAGAACAATTTGTTTCTGTTGACATGGCACAGTTCTCATGTATTAGGT GACGTAAATGTTTACCGAAATCAATTATTGTACTGAATGTTGTTTTTATC ATTAGATTAACATCGtcttctttttttgtaaaatattgtaaaGTAACAAC CTCCGTATTATTCTTTCTCGACCTTTTCACTTCAATCAGttctcttgggt acctaatttATTGAGTGTGCTTACTCTTAGATAGGTGCCTAATTTATTGG GTGCATTTACCAAGTTAAAATTCCAATCATAATTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015435TCONS_00015435Clytia hemisphaericatranscript
TCONS_00015436TCONS_00015436Clytia hemisphaericatranscript
TCONS_00015437TCONS_00015437Clytia hemisphaericatranscript
TCONS_00015438TCONS_00015438Clytia hemisphaericatranscript
TCONS_00015439TCONS_00015439Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015437-proteinTCONS_00015437-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:297300..305936 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ANAPC10PREDICTED: anaphase-promoting complex subunit 10 isoform X3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.28 31.35 26.07 26.15 14.47 11.7 9.54 9.33 6.41 6.53 4.8 6.19 3.98 3.95 6.49 6.75 11.74 9.24 2.28 1.71 5.57 5.1 22.21 15.47 10.22 9.8 2.63 2.27 12.25 14.22