XLOC_008064 (gene) - C. hemisphaerica

Overview
NameXLOC_008064
Unique NameXLOC_008064
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000187:262949..271610-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008064 ID=XLOC_008064|Name=XLOC_008064|organism=Clytia hemisphaerica|type=gene|length=8662bp|location=Sequence derived from alignment at sc0000187:262949..271610- (Clytia hemisphaerica)
GGGCTGGAAAGTTTGTAAATCGGGGTTTTTGCAGCTAGCTCAAAAATTTG AACGTGTGTATATAAATATGGTTAAAAATCTGAAAGCTGAAACACTTAGA CGTACTAAGAAACGCGTGTTGACAACATTTTAAAAAGAAGTTTCAATATG TCTCCTTCAAGCATACTTATCACAGGTAACTTTCTTCAATTTTGTGTTTT TCGCTGACAGTTTTACGAGAGTATGAAATGAGTAGTCTAATTTTTTAGGC ATATGTAGAATTGGGCTTTTCCAGAAAAGAATTTTACCCCCACCGTTGAG GATATTGATTTGTGAAGTATCGAACTCCCTCGATATCCTACTTTATTAGT AAAGACCCCCTGGATATCTACTCTTAAAAACGCTCAACCCCCTGGATATC CTCTCTTTAAAAGATGCTTACCCCTGGATATCGTATTTCTTACTTGAAAA AACACTTTACCCCCTGGATATCCGCTCCCTTGTAGATATTTAACCCCTTG GATATCCAATTTTGAACAAAAATCGTTAACCACGGACTATTTCTGGAAAA GCCTATTTTAGGCTTAAACGCTTATATTGGGGTGAATATCTGATAGTGAT TTCTTTTGGGGCCTGGATTTTCAAGAATTTTGGCCAATTTCGCGAAAACT AGTCCTCGCGAAATATTTGAAACCCGGATTTTGGCCGAAACCCTTAGGAA AATGAAAGAAATTGGGTGAAAAGAGGCCGATTCGCGAAATTTTCTCCCCG CCAAAAATTTTGATACTCAAGTCGAGAAAAAAAGTCTACGCAAAAACTAA GTGGTTAAGGTACTTCTTTTAACTTTGGACTTGAGAATTCCGAAAATCTA AAGGCTCCGATTGTTCTAAATTCCTTCTTAATATCATCTTGGCTAAAAGT TCTATTAAAAGCGTCATTACAGGGGTGATTACATGATGAAGTCGATGATC AATTGAAGAATCATATCTGTTTCAAAATTCCGATGGCCCCTTTAAATTAT CACAATACACTTTTGCTTTAAAAAAAACATCCAACAATTGGAAGTCTTCC TATGTTCTTAAAATTTTCCTAATTTCATAATTTTGACAGTTTTTTCCCAA AGAAATCGGGTGTTTTAGATTCCGCAAAAATTAAAAGTGTTCTTAACTTA TTCTTAAATATTTTGGCCGTCGATGCTTACTAGAAAAACGTGCACAAAGC TGTCATTATATCATTGGCTTCGACAATAGATTAAATTTGGTTGTTTCTAT TTTTTATAAATTTTAGGCTTGAATATTTCTTTTACATAAGTGTTCCCGTT TCATACCAGACACATATTTCATATCAGGACAATGTCTGCCTATTATCGAA CTATGCTGATCTAATCAAAAAATGTTTTTCTTTCCCTCTTTATGACCAAT CTTGCTCCACATCCGTGCCAATTCAATGTGAAAAAGCTTGAGAATAAAAA TTGATAAGTAGGCAAACACAATCCCTCTTATTTAAAAACAAAATCTTTAG ATGTCCTTGCGATCTTCCTAATTCTTAGTTTATTAAACTAAAAACTACTA AAAATGGTAAAAATATTAATCTTCGGAATTTCTAAAAAAAGTGATGATAA TCTGTTTTTAGGGTTTATGCAAAATTTTGGCTTCCTCATCTAATAAAACA AGAAGCTGAAGCGGCATGAGAGCCCAGCAACATAGCAATAGTCAAATGTT TGATTGCAATGCGTACAGTTCGTACCAGATTATTTGCACTCGTTGTTACA TCGCGCCGTTTCTTCCAAAATGTTTATGAATTGACAAAGCGCTGTATTCT TCGAAAACGGTCTTACAGCACCACAGACAGCGAGATGCTAATGAAAGGCC CGATACTGAATACACCCTCTTCTCACAGACCCACTGGGACCCCTTCCCAC TGGAAAAAATTTGCCAAAATATCGTCCCCGGTGGAAAACTCTACCCATTT TTGTCCCCACTGAACACAATCAAATAAAACAATCCTCACTGCAAAATATG ATGGTTATTTTCCCCGTCTTCACTGAACTTTCTGACTTAAAATATAAAGA ATTCAAATCCCCAGCCATAAAAATATGGGAATATCAATCCCCATCGAGTT TCAGTCCGTTATCTTTATCCCTGCTGGATGAAAAATTCTAGCAGGTCTGT GAGAAGGGGGTGTTATAATGGGTGTGTTTATTAGGGAAATGTAGAAACGA AAGAAGAGAGAAGAGAGACGCCAAATTCTAGGAGAAACATAAAATAGAAA AATATCCAAAAGTAACAAATTCAACTTCACGATGTAAACACTTCCAGCGC CATTGGGAAAAGGTGGGCGGACAAGGTCATTAAGCTTTACATGCAAATCC ACAAAAAGACATTTTTAGAATCAAACTGACAGTCTGTTACAATTAACATC TTTTTACAAATATAGATCATCGCGTGAATTTTGCAGGCTGGTTTTGACTG TTCACGTGCAAAGAGATATAATTCTATTCCCCTTCCTTTTAGGGTAAATT TGGGATAGTTCAGTCATTTTTCATTAAAAAACTTGAAAATGAAAAAAATG TGTACAAGATTATTTAAAGTTATTAAAGTCAATTCCCGCGAAATGCGATT CTTTGGCTTTTAAGGTGGGCACGTGGGATTTGTAGTTTTGACAGACAAAA AAGAGTATCATAGCACATTTTCAAGGGTGATACCTCCGCTTTAAAAAAAC TAAGCGACCGTAGTGTAGTGGTAGAGCATCCGGCTAAGGTGCGCAAGATT ATGGGTTCAATCAACTGCAGGGTCATACCAAAGACTTCGTAATTAGAACA AAAATGGTACTTGATACGAGGGCAAGTGGAGCAATTCAAGAAGATTGAGT GGCGAACTCCCCTACCTTTGGGTGGATAGTCATCGAAAGAGGAACCTCCT GGTCGCCTCCGACTGCAGTTTCAGACTTACTTACTACCTTGAGTAACTAG TTCGGAGAACGGGTCGTTCGGGGGCTGTGTAATCAAACGTAGCCACTTAG TATGTTTTTTCTTCATTTGTGAAAAAGTACTTTTTGCACAACGAAAACTT TATCGTTTGATCGTGTCAGCAGAGAAATCGAAACCCAAATATTGACACCT GCGGGGATAAACATTGGTCATGCATGATGTCTAGTAAAAATAACTTATGC CCTCAAAAAAGGGGGAGTAGAGGCGGGCCTGTCTAATTTAAGTATACTAT GATCTGATTTTACGAAATGACATAATAGCTACTGCATTTCGAAATGTATG ACATAAAGCATGTCTGGGAATTATCAAAGTATGTTTGCGCGAATGAACTG GGCCAATATTTGTATTTATGAAACTTCAAAACAAGATCGAAAATTTGGCA AGAAAGAGTTAAAAGGGAAGACTTTCGTGATGTGGTCAAATGGGGGAAGG GACCGTTACATAAACCTATCGGACACAATTTAGTCGACAGAGAACAACAA TACATTAAAAAATAAACATTATTAAAAATGTCTGAGGACTGGTTTTGCGT GATTTGATTTTTCAGGTTTGATCAAAAGCAGAAACAAAAGAAACTATAGA TTGAAATAATTAGCTATGAAAAAATGACTCAATCTTGGTTGACACCATCG AGAAATAACCTTGATTATTTACATCACTGTTTCAGCATACTGTCAGATAA TAGAATTGATTCCGTGATATAAACGATTCATTATTACCACAACTCGATAT TTTAACTTGACTTATTAAAAAAATTTGAAATATGAGGCGAATTTTTATTG TGATGAAGCTAATCCAAATATCGATGCACAACACTGCAATGTTAAAAGTC TGCAAACACTCGTGTATTATTTTAGTGGTATAGATACCCGGTGTGATTAT AACTTTAACGCTCATCAATTCATCAGTTAGGTCTGTGAAACATTTCAAAA GCTTTTTGAGTAATACCGGGTGTTTCAAAAAAAGTGTACAAATTTGAATT AAGATTTTGAAAAAACTAAAAAAATGTTATTCAAAAATGACGCTTTTCGA AAGAGATTTTTTTAGAATTTTCTTTTGAACACGGTGAAGCAAACTTAAAA TATGATGGCTCAAAATCTAAGTTAGCCTTTCTTCATTCTAATGGTGAAAA AGTTAGATTTATAACAGTTTTAACCTCACTTCAAACTTGCACATTTTTTT CTGAAAAACCCGGTACAATTTTGAAATCTATACTTACATATGAACAAGGA GGTGAAAAGCAAAATGAAGAACATCGTCATCGTTAACCAAACCAAAACCA AAAAATCAAAATAACTTCAACTTGAAATTTTTGAACTCTTGATAAGTTAG TTCAATGTTGTTCTAATAGATTCTAGTGAAAGAAGGCAAATCTGGAGTAT TTGTTAATAGACGATATCGGCTTAACGTGAAAACTCAGATTTGACCTCCG AGAATTGCCCACAATGCTTTGCGCGGAAAAAAGTTCAAGGTGAATTTTTT TCCGCACAAAGCATTGTGAGGAATTCTCGGAGGTCAAATCTGAGTTTTCA CGTTAAGCCGATATCGTCTATTTTATTATCTCAAAAGCCAAAAGATGACT AATAGATTTTGAAAACCTTATGTTCCATAGTATAATTTTTACTTCCCTCT AGAAGATATATGCTTGGGCATTTAAAAAAATTAATTATTTCACTGCTAAT TGAGAATCAAAAGACAAACCCAATGAATCATAACAAACGAAGAATTTGAT TCAAATTACAGGACTAATTATTTTTCACTCCAAAACATATAACAGCAACA AGAAAACGAACTAAAACAAGAGAACGAAAATTTAGACCAATTTTTACCTC CCACCAGGATATAAGATTTTGATGAAGAAAAAAAAAAACATGATAAGAAC AACTAAAGAATGCATTATTCTTATTTGTTTGTAAATTCACAAATACAATA AAACCATGATTAAAACCTCATAGAAAGAGGCTTTTTATTGATTTGTTAGA ATTGATGTACTGATGCTTTACTGAGATATTTGGAGCCGAGAAGGCTTAAA ATCCTATTGTGTCTTAATAAACACTATCAAAACATCGAATCTTTTTTTAA AGTCTACCAAATAAATTTGTTGTTTTGATGAAGATTGAACGAGAAAATCT GGATTGTTATCGAAAATCTAGTTCCTAAAAATAGGATCTAGAAAAAATTA CTCAATACACGTATTTTTATAAGAACAAGCTATATAAGCATATAGGGCTA TATCGACCAAAATATTAAGAATTAATTAAGAACATGTTAAGGCTTTGCTG GGAAAGCCCAATTTCCTCGGAAAATACTCACATTATGGTGAAAATAAGAA CATCTTAAAAAACATTTAAAGCTTAAAAAAACTCAAAAAGTTAAGAACAT CAGAAGGCTTAAAAATTTTTGGATATTCTTATAAAAAAACGGGTATGCTA TTCATTAGGAACAATGAAGGAGTCTTATGCTAGAGAAAGATGAATGTTAA TTCTGCTCAGTCACTTGCACTTTAAATTGCCATCATTTTCCTATGGTGCG AATTCCACTCGAAATGCATCCGTGGTTGGAGACCCTTTGAAATAGCCACA CTGCCACGGCAACCAGTACCACGACAGATTCAATACACGTTTTTTATAAC AACAAACTATATAACAACAATTTCAAGGTTTCCCGCACTCTAAAACGCCG AATATCTTAGGAAATCACACAAAAATACTCAAAATATGGTGAAAATAAGT ACATTTTGAGAGCATTCTTTAAGAATATCCAAAGGGTTAAAAAATTTGGA TGATGTTCTTATATAAATTAACTTGTAGCAAGTAATTTGGATAGATTTTT TTAATCACGGCACAAATAGCGACGAAAGATTTTACTTCTGAGGCAAATTA GACCAGATTTAGCCGAAGTATAAATTATATTGTATTACGCAATTTGTTCA CTTTAAAAAATAAAAATTTTAATAGTTAAAAATCCATAATAAAGGCTTTC GTGAGCTACATCACGCGAGAGATTATACAAAGTAAAGATTTTCTGATAAA AAAACAAGATATTATAAATCGATAAATAACTTGTTAAAACCTAAACTTAA TTCCTTTTGACCTGCGCTAACCGTTACTTTTGGTGTGCGTGATATAATTA TGAACAATTACATATTTTTACACGTTTTTTTATAAGAACAAACTATATAA GTACATAAGGCTTCGATGGCCAAAATGGTAAGAACAAGTAAAGAATATTT TAAGGCTTTGGGGACTCGAAAACGCCCGATTTCCTTTAGGAAAATGATAA AAAATATCCACAAAATGGTGAAAATAAGAACATGTTAAGAGCATTTTTAG GCTTAAACCTCAAAAGGTTAAGAACATCCGAAAGGCTTCAAAGATTTTGG ATGTTCTTATGAAAAAACGCGTATCTTTTGCATAAAAAACACTGGTTTTC GTCCACATATGGAAATACTTATCTCAGAGGTTTTCGTGATTCTGTCATTT TTGTGATAATCCCAAATTTTTTGTTTTATTTGAAATATTTTGATATAACT TCATCAATTTAAGAAATCTCAATAAAACGAGTGTATATCAATAGTCTTTT ATCAAGTCCCTTGGTTTTGAAGATGGTATTGAGGCTAAAAGTAACATTTA GAAAGGGAAAGAATAACTTTAATTTTTAGAGATCATTTTTGTGGAGTTTT GTCAGTAGAACAGAGGATTAAAAGAGCAAAAGAATTTTAGGTTTTAACCT TAGCCAAATAGGTGAAGCGAAATTTAAGCATAAACTTGGTGACAAAAAAC ATTCTAGCTTGAAATTTAGGAGGATCTTATAAGGGATCTATTAAATGAAA ACGTATTCAGCACTTTTAGTAGCTCAAAAGTAACTTAAAAGCCTCTTAGA CTTTTCTATAATCTTCGACTTCTATTGTGTTGCGCAACAGCAAAACGGTC CAGACCGGTGTGAAAAATGTAAGTTTTGCGTGATTAAAATAAGACTAAGT GCTACTAGGCTTGCAAGAAGGCGGTTGGAAAATCAGTCACACTTTATCAA CAATAAAGTACTTTTTATTGTTTATCAAACATTTTCCCTATTGTTTTCCC CAAGTGTTTTGTAATAACATTAGCTTTGCTAGGTGTCAAGGTTGGACTAG ACTATAAAAGTGACCGATGATCAAAATGTGAAAAATCATTTGCTTTAAAA AATATTGAGAGCAGAACTTTTTGAAACAACTTACTAAAACATATCATTAT GTTCAATTATTCTCATTTCTTTGTAATAGTGATTGTGTGTTCCACATTGC TACCATTATGGATTGAAGGGCGTCCATTGGAAACTGCAACCTCCAACGAT TGTTCGTACATTGTTCGAAGGTGGGGCGTGACGTGCAAGAACGGAAAATT TGCAGGTAAGGATAATGCCATTGATATTTATTGACGTTGCTAATTTCTTT CTTGAAGTTGAAGTTTCTTGAAGCTTTCAAATTTACCTATGAAAATAGAA TTGGACTTGGAGACCTTTGTTTTGTCTGAGTGACTTAAAAAATTCCACAA TATTAGTCTGTAGGTCAGAACAAAAGAGATTTTCGACGGATTTTTCAAAT TAAGATTATTTTCTTTTCCAGTCATTTTTAACATTCAAAATCAAAAATTT ACCCATTGCAGGGGTATTACAAGCCTGTACAAATTCATCGACAGATACAG TACTTCCCTGTAGTATTCAACTTCTCTATAAATTAATCTNGAAATTTACC CATCAGGGGTATATACAAACATGTAAAATTCCATCGACATATACAGTTCC ACCCTTTAGTATTCAACCTCTCTATAAATTAATCTTTATTGCACTTGTAG TGAACGCTGGAAGCCTTGAAAGACAGATGAAACAGATGAAGTTGATGTTG AAAGCGTTCCAAAGAAGAACCAAACGAAATATTGCTCAAATGAATACAGA AGAAAAGGATAGTCGAATGGTAATATCATCAACAACTAATCACAGGAAAC TTTCAATAAAGTTCCAAAAGCTATGGCTTAACTAAAAAATGAATAGAAAT GTGGCAAAGTTGCATTTTGTGCTGGGAAAAAAACATTTGCATTTTTTACA ACTTGTTTTTTTTTTAAATTAAAAACCATAATTTACCAAGCAGTTTCAAT GCTAACTAGTGAACTTTCTGGAATTCCAATCTCAGTTTTTCCACTTTTTA TCATCAACCTACCACAGATATCTTACATAAAACAATAAAAAGGGCTTCTT TATCTCTACTGAAATAAAGACACGAAGATGTACAATCAAGTGACTTTTAG ATATCTGTGCACCGGTAATGAAGTTAGATTTCAAATGAAAATCGCTGGAT GAGTCTTTTTAGGAAAGCTTTCTTTGTTAACTTTTTCAAGGGATCTTTTT GTTTTTCCATCATCAATGTAAAAGAGTGTTATGTAAATAAGGGAATAAAT ATATTTAGAGTGTTATTATATTAAGGCCGCTACCCACTCAGCATTTTATG GTCGGCGACCAAGGCGTACGGCTCAAGCACTTTGGTCGCTAAACACTTTT CTCGTTCCACAAAACGACAGCCTTTGGAGGCTTAATTTATGCAATAATGG CTTGATTTATGCGAAAATTAAGCCACGCGCCTTGTTCGCCGACCATAAGA TGCTGAGTGGGTAGCGGTCTTTACAAGTATGAAGGTTAATCAAGAATTTT TCTTGATATTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014430TCONS_00014430Clytia hemisphaericatranscript
TCONS_00014429TCONS_00014429Clytia hemisphaericatranscript
TCONS_00014428TCONS_00014428Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014430-proteinTCONS_00014430-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:262949..271610 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66 0.51 0.68 1.27 0 0.2 0.05 0.1 0.1 0.09 0.24 0.17 1.73 1.47 0.03 0.05 7.83 26.65 0.95 1.72 4.88 3.96 2.89 3.72 2.66 5.82 0.37 0.23 0 0.18