XLOC_008044 (gene) - C. hemisphaerica

Overview
NameXLOC_008044
Unique NameXLOC_008044
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000187:159690..163437+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008044 ID=XLOC_008044|Name=XLOC_008044|organism=Clytia hemisphaerica|type=gene|length=3748bp|location=Sequence derived from alignment at sc0000187:159690..163437+ (Clytia hemisphaerica)
tttgggggccgtctctgttttgggggccatatactgtagctTTTGTGTAC TTTTTATAGGgaaaaaaatgataataagaaaataaaaatcagcaaaataa tTTATGGTGAGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAG GCAGATGAGCTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTAC ATCCAGATTTCTTCAATGAATATCCAAATGAAAAGGTGAAATTAGCAATG ATTGTTGTGTTCatacttaaagggacataaaactactgacgaaatttgta aacaaaccgtatgcagcggaatataaaatcaaaacaaatgccACAATGAG GCctcccagcggcacccctaatcacgccatcacgcaaaaaaattttctcc atcacgcatcacgaaaatcgctaaaatttgtNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaata gcgaaaaatagcccaaatcacgcatcacgcctcaaatttttgccctatca cgcatcacgccaaaaccttgatcacgccatcacgccgaaaaaaatctcta atcacgccatcacgcaagaaaaaagtcccaatcacgccatcacgcaaacc gctgggggggcctccacaatatgtcaaaattaaaaatcaaaacaaatatg gctgattttataattgtttcaattgttttacaagtttgttttggacacgt gattttaatttttctctttaataacacgtggtttgcgcaatacattttac tacttttatgtctctttaagttccaaaaagttttattcttaaaaatattt gcaACATAGATGAAAAGGTAATTGTTGGCTAAATAGAGATTTAGTATGGC AATTTGTACATTAGCAGTTTTCTTGTTTAATAAGCTGCAaagatttcttt tatttttcagataGCATTGGACAATAAGCTAATGCTGGTGAACTTTAAGG ATCTCGTAATCCCCTAGAGATTTTATCAGTCTTTCATTCATTTACCAGAT TTACCAGACAGCAATTTCTGGAGTATGGATCAGACCATACTGTTaacttc tttttgttttttttcagcaaATAAATGAGCAATCCCTGAAATTGCTGCAC TCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGATACATCCTT GACTTTCTACAAGAAACACAAGGAATCAGGTATGATTTTGAAGCCTTTTG GAATCATATACGTTGGTTTTAGAAATGAAGTggtgaagagaaaaaaaagg agGATTGCTGAGGTGCATTCGGCCCGCCTAGCTAGGGTTCATAAAATGGC AGCATATATAAACAGTTATGAACCCTAAtcccaaacaaaacaaaagaaaa ccatTCTACtcatgaaatgaaattttagatATTTCTTTATTCATAGCAAC TGGACTTTCAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAA TTTATCAAGAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAA GTAGTCTCTGGTGATAACAACAATGTGGATCATATACAAAATGTTGAACC GATGGATCTTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTGG ATTGGGTCACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTCA AAACCTATACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAA TTTTGGTATTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCTA TTAACAGCTTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaa aaaagcttTCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGG TTTAGATCACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAG TCTGGAAagaggtaaaaaaaaaaaattatttttggtgaaATCAGGTGAAA TTGTATCATTTCTATGGTTAAGCCTAGCATTTATACCTCATTGTGCCATC TTTTCCAGTAGCTAGGGGTTGAAGCCCTCCTTTAATGCTGGAACGCCAGG TTGTAACAAAAGTCTAAGAATTTTCCCTTTAACTTATTCTATATACTTTT CTTTTCTCCAAGGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGA TCAAATCGAAGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTC GTTTTGTGAATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTAT AAATCCTTACTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGG GGATAAAAGTTTCAAGAATTTGCTCGCTTTGTTTGATTGGTAATATTCTT TTCGTATAGATTTGAATTACATACATCAATATTCGTCCCCTTATAATCAC ACTTTTGCTaattaatttcaaacttttgttGTAAGATTGTGTTGTAATAT CAACAAAACGTCGTCACATTTATGGATCGGTTATCTAAATTTAGTTTACT TGAAACAAACAAGTGATGGAATTTTGTAGTTACATTGTTGAAGTTAATTT cacatttatttacttttaggGATGATTCCTTTGTTGGAGTTTCGAAGGAA GGCTTTCTGAAAATTCCACCTTTAACcagtaaaataattttatttgattA CATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAAGAGTTACCTCC GGTAATTATTATATAACGAATAATGCTTGAAACGCAAAGAAAATgagaaa ctaattttcgtggtCGAAAAAAATCTCGAAAGGATCACATTTCAGGGCaa ttaattttctttgtttcgcCCTATTTCGGACATAAATGATTCTTTCAtga tttaatgaaaaatgacaaaatttgtaaTTCGTGGGTTCTAATTTTTGGGG TTATACCGAAAATTAGTTtctgtgaaaattagttccctaaaGCATTTATC TATTATCATCTCTCATGATTTTAAGTCCACAATTTGACAAGAAGAGTTGG TATtgaataccttattacacaaaatTAGCTAGTCATGTTATTAAAGCAAT TATTGACCCAGGGCGTGTTGATTATAAACCATCTAACAAAATTTGAGTCT TTTTCCGTCGATGAATTATCGCACTCTCTTTACCAAAGTTAAATACCTGA GTAGTTGTATAAGAGAGTAATAAGGTATTATTATAATGaaactttgtttt ctttttagaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAAAAAC AGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACAAATG AAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTTAGAT TTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTCCTGA TGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGACCCCTTATTTTAC AGTACATACTTGTgtaaagattttccaaatatttaatACCCTCCCTTN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014365TCONS_00014365Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Conserved uncharacterized C3orf23 proteinTCONS_00014365-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:159690..163437 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TCAIMT-cell activation inhibitor, mitochondrial isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.53 47.91 32.95 34.35 35.13 25.87 27.08 28.47 15.45 17.69 13.25 12.25 11.94 8.54 13.52 12.84 22.42 19.31 11.96 13.91 20.44 22.28 33.65 32.58 15.53 19.92 25.07 18.34 28.46 31.8