XLOC_007749 (gene) - C. hemisphaerica

Overview
NameXLOC_007749
Unique NameXLOC_007749
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000174:254940..257082-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007749 ID=XLOC_007749|Name=XLOC_007749|organism=Clytia hemisphaerica|type=gene|length=2143bp|location=Sequence derived from alignment at sc0000174:254940..257082- (Clytia hemisphaerica)
CGCATGTGTTTGATGTTTGAGTCTCATCCAGTTTACCCTTATACCTGGCT
GAATGCTAAGCTAAGTGATAGTATCGGTATGATTTATAATAGTATTTGTC
TCCTGTATTAACCAATCTTAACTTATTTTCTTTTTTTACAGACTAGAAAA
GTAGAAAAAAAAGAAACTATTATATAAAATAGAGGCAGCAGATGGCAAAA
ACGAAAGCTAACCAGCTAAGACATGAACCGAAGTCAGCATCTACCCCTGC
ACCATCCAAGAAGTCAAGTGGCAAAAAGAAAATGAAAAGCCCTTCAAGAA
CACCTGCGAGTCCAGATAAATCGAACAGATCAAATTCAAGATTAAATGAA
AGCGGTATCAAAAAGAGGTATTTCAACTTTGGTTTTTTAAACGATTAAAA
TTTGGTAGAAATTTGAAATCTTCATTGAAAAAAAAAACTCCCCCGCCCTT
TGTTTTGATCAAAACCAGCCCTCCCCCCGACAGTTTACATGAATGCGTGA
ATGGGCTTTTTTTACGTGCGCGAATGCCTGAAAATTTCACAAAATCTGCG
TGAATGCATGAATTGGAACTTTGCGTGATGTGCGAACCTATATTATTTTA
ATTCCCCTACCCCTTAGATTTCCAAAAATTTATAACAAGTGCTTTGACTA
AAAAAGTCAAGCGACCTTAAAAAATCGAATAAATTCCCCCGTACTATGAA
CAAAAGTTTGGAAAAATAAATTGCGTGAATTAAAGGTCAGCTTGGGGGGG
GGGTCCTCATCAGAGCTCTCGTTTATCAATTCTCATCCTTTTTCATAAAA
ATAAATATATTTGCTAATCTGAAGCTAAGGCTTTACATACATACGCCTAA
AAAAACTATTCAATGTAGCCTTTGCTTAAACCTTCAAAAAGCTACCCCTT
CGATTTTAGAACAGATTTTCAAAGAAAGCTTCTATAAATTCAGCAGCTCT
AAATATGTTTTATCTAGATTCTGAATTTAAGTCTAAATAAGTCTTGAGTA
GTACGATAAGGCCCCGTTTATAAGGCACCCAAGATCAAAAGCACCCTGAG
ATCGTGAGTTTTATTGCTAATTTATCTTTTCTTTTGTGTATTTCAGGAAA
TGGAAAGCTGGAACAAAGGCGTTACGTGAAATCAGATTTTACCAAAGAAC
CGACCACAAATTGATTCCTAAATTATCGTTTTGTCGATTAGTAAAAGAAC
TTTTATCTAATGCTGTCGGAGGTGGGTCTGAGCAATTGAGAATTCAAACA
TACGCTTTGGATGCTTTACAAGAAGCTGCTGAAAGTTTTATGGTACGTTT
TTTTGAAGAATCAAACCTCTGCGCTATTCATGCTAAACGAGTAACACTTA
TGCCGAAGGATATGCAGTTATTGAAAGCGTTGAAATATGACTGTGAGTTA
TAATTTTGTCCGATTTCATCATTATGCAAATCTTACTATACATTGAAAGC
TTTTGATTTGACACCTTGGCTTCTTCGATAGCTTAAAAATGACATTCTTC
TGTATAACGTGAGATCTAAATCTCTTTTGCCCATCTAATGATGATTTCAA
ATCAACTTCCTAACGCGATTCTACTTTTCTAACTGGGATAATGTCTAGCT
GCTATAATACTTTGCTACTCATGAATGAACCCACATTAGTCCATCATCTG
AACTAGAAAACTTGAATTTTAAGGATTTATCTAGCGGCCGAATCCGCAAG
AAACATCGGAAAATCATTTTCAAGTTGTGCAGTACTTGACTTGTATTGTA
AATATTAGATTCTAGAACTGCTTGGGTTTCCAAGGCAAGGGCGTCAATTG
GAATTTACAATTCTGTCTAATTTTTTAATTCAAATTTCAAACAATTTGAA
ATTCGTCTGGAATTACCAGTTTTTCGAATACTACGAGTATTACATCACTA
ATGATTTGATTAATTTGATTTACTCCCGACACTCTGGAAAGTTCATTGGG
TTTTTATGTAGTTTTAGGAATGATATTCGACAAGAAATTTAAAAACGTTT
ATTTTTAATAAGTTTTCATTAGTAGTATACCTTGTAAATAGTATTTTAAA
GGTTTTTAAAATTTTAATGAACTTTTTTTTCCTTTTAGTCTTTTAAACCA
AACTGAAAATATAAACTTTACTACCGGAAGGTCTTTTAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013881TCONS_00013881Clytia hemisphaericatranscript
TCONS_00013880TCONS_00013880Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013881-proteinTCONS_00013881-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:254940..257082 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CENPAhistone H3-like centromeric protein A isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.34	3.89	2	1.53	96.15	71.52	46.07	47.07	54.07	52.88	36.76	33.22	14.22	14.11	22.74	26.51	42.63	38.64	2.94	4.23	23.39	23.25	12.73	13.65	84.43	82.52	16.85	6.85	7	5.56