XLOC_007483 (gene) - C. hemisphaerica

Overview
NameXLOC_007483
Unique NameXLOC_007483
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000167:341646..351226+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007483 ID=XLOC_007483|Name=XLOC_007483|organism=Clytia hemisphaerica|type=gene|length=9581bp|location=Sequence derived from alignment at sc0000167:341646..351226+ (Clytia hemisphaerica)
ATTACAGTTCAGTGTGCATAACAACGTTTCTTAAtttaagttttagtttt aaaattaaaaatgagtAAAAGAGAAGATATTGCTGCATTACAGTTTGAGT TGACAAAAATCAATGATGAACTTAACTCTATCAACGATCAAATGAAAAAT CTATTAGTACGTCAAGAAGAATTGCGTcacagaaaaaagaaattatcaaa GGAGTTACTTGATTCGGAGAAAACTCAGCAAAATGACATTCTCAAATTCC AATGGGATTCTGACAATTTTGAATGGAGCGAATCTATGAAAACTACAATG AAAGAGAAATTTAAGATAGAGAATTTTCGACCACTACAAAAACAGACAAT GAATGTAACAATGTCAAATTATGACTGTATGTTGATTATGCCCACTGGTG GAGGAAAAAGTCTGTGTTTTCAACTACCTGCTGTAGTATCCAATGGCTTC ACTTTGGTAAGTTGAAAACATTCTTTTTCCAGTGTTGCAACCTTTCCAAC TGTAGATGGAGATCTGTCCAGTTGAGATACAAATATATAATTTCTGTCTT GCttttaaaagttcttttgaTTGTCCATAGTCATAAAACCTAGTTGCAAT CTATCTTtccttctgtttttttttaaggaaataacCATTATTTTATGTTA TGATGTATGATATTGTTTAACAGTGCctgatttttaaaaacagattacat aaaaaaaaaaacacaaaaagaaagTATGCTCTATCTTTGATTTAGCTTTT GTTTTCTTACTAGTAATTTTGGAAAGttaatcaaaaaatttagttaaTTT TATGTAGAAATTCTTCCTTTATCCTTTAAAGATTCTTAACCCTTAATAAA AAGCCTATATGCAGCTTTGCTCAAtctttctgaaatatttttttccaggt CATCTCACCTCTCATTTCTTTGATGGAAGATCAATTGATGGCTTTGGATA GACTTGGCATCAATGCAGCTCTTCTCTCCTCCTCCATCCCTACTAAAGAT GTTACCATCATCCAGAACTTGCTGGTTGACAAAGAATGCCCATACAAACT GGTGTATGTCACTCCTGAGAGAATAGCAAAAAGCAAAAGGTTCATGGCTA AATTGGAAAAAGCATATGCaggtatgaaaagaaatttcagTGGTTTGCTA ATACTTTTTTCAAGCTTCTTCCTCTATCAAATACATAGTTAATAGTATTT GATAGTATAATAATAGTtttgtgaaacttttgaaaaaaaattgatttaaa atgtgTGGTACTGTATGTGTGGTACACAATTCTCTTTAATTTGATGAAAC TTTACTTCCCTTCTTTTGGTCTTTCTTCTGTGTTACCGGGTGACTCAGAA ATAAGTTATATACCGGGTGGCCCAGAAAAAGTAATATACCGGGTTACCCA GAATGCAGAAAAAAGTATAAGGGTTTGATGAATAACACTTTGTCCGATAT AATGTGAACCTTAAATGGATTCTTTCGACATTGTANtctgttttttttta aggaaataacCATTATTTTATGTTATGATGTATGATATTGTTTAACAGTG CctgatttttaaaaacagattacataaaaaaaaaaacacaaaaagaaagT ATGCTCTATCTTTGATTTAGCTTTTGTTTTCTTACTAGTAATTTTGGAAA GttaatcaaaaaatttagttaaTTTTATGTAGAAATTCTTCCTTTATCCT TTAAAGATTCTTAACCCTTAATAAAAAGCCTATATGCAGCTTTGCTCAAt ctttctgaaatatttttttccaggtCATCTCACCTCTCATTTCTTTGATG GAAGATCAATTGATGGCTTTGGATAGACTTGGCATCAATGCAGCTCTTCT CTCCTCCTCCATCCCTACTAAAGATGTTACCATCATCCAGAACTTGCTGG TTGACAAAGAATGCCCATACAAACTGGTGTATGTCACTCCTGAGAGAATA GCAAAAAGCAAAAGGTTCATGGCTAAATTGGAAAAAGCATATGCaggtat gaaaagaaatttcagTGGTTTGCTAATACTTTTTTCAAGCTTCTTCCTCT ATCAAATACATAGTTAATAGTATTTGATAGTATAATAATAGTtttgtgaa acttttgaaaaaaaattgatttaaaatgtgTGGTACTGTATGTGTGGTAC ACAATTCTCTTTAATTTGATGAAACTTTACTTCCCTTCTTTTGGTCTTTC TTCTGTGTTACCGGGTGACTCAGAAATAAGTTATATACCGGGTGGCCCAG AAAAAGTAATATACCGGGTTACCCAGAATGCAGAAAAAAGTATAAGGGTT TGATGAATAACACTTTGTCCGATATAATGTGAACCTTAAATGGATTCTTT CGACattgtaaagaggaaaggcaaacttaaaatctgGTATATGACTTTTA AAATTCGGTTCAGTGGTTCTAcgcttttgaagtcaaaatttacttttaaa aagtccaaaaacacgtcaaaaaagGGTCATTAGggaggttaagcaagaag ctatctattacgtacggaatctattacgtgagtttttagACTGGATCCAA GGCGTTTTAGCCTGATTCCTAAAGCTTCACGGCATAGGAGGAGGTTAAGC AAAAAAGGCGATCTATTacgtatgacgtaatgtttatttttccgtATCTC ACATTCGGCCCCAActtctaaaattttcttctttttttcttttccagttt tCTTGTTAGTGGCTTGGTCTATAAAATCCCCTTACTTTCAATTTTAATCT ACTTAGTTTTTTCCCAAGACAAatgtttttcacaaaaattaaatccagaC AATTATATAGTCAGAGTATTCTATTACTTTTACTATTATTATCATTTCAA TGATAATATAATATCATGActtaacatttcaaaaaaatatatttcataac TTAATTCCTAGTTTACATAGGTCCCAATCAAAAATCACtgctttatttat aaacaaaaaaaataatctgtAAGAGCATAGTGTACAGCTATGTCTTCCTT GGGGGGGGGACCAATTCCTTATTTAGCTGAATTTCTATGAATGCTTCACC ATTACCAATAAAAACacccttataaaaaagtgttgTGTTTCATATCTGAC AGGTGTTACTTCTTCTGCTTCTTTGCATTCCAAGGTACCGATATCACCTT TTTAGGAAGGAAGATGTCTCTTAGAATCAAACCAAACTTTCTTGAACGCT ATAAtgtagaaaaaaagttgaagaatgACCAGTTAGTTAAAATTTTTCAG CGAAGGATTGAGAACTCAAAGCAGTAGCAATAGTCCAGAAGCTTTATATA ACTTTGGGGAACGGTTTGAAGTCCAGCGGTTGTGTGTGACATCAAGTTTT TAGCAGGCTGATTTGTATACGTACAATTTATAGTTGATGATGAAGAGCAG AAATTGGATCTCGTTGCTTACCAGcatttgaaattggaaaaaaataaaca tttcttcTGTTATGCTTTGGCAGGTGGAGGGGTAAAATTTTTTGAGCTTG GCAGAGCAGTCTTTTTCTCGTGTTTGTTGCTTTGCTTTGACATATTATAA CTTTGGCTTCTTCGCACTTGATGGTGGCACCAcagaaacactgaaaaaca tgaaaaggaAATATGGTTACATGATGTTCATTGTAATGCTTACTCTGGAT GTATTTGGACTTTCAGAGCATataaaaagcaagataaaaaagagaagaaa aacaaaagaaccagaaagacacttctgtttgttttggtttgataaaaaag ttagCAAAGATTATTTTGTTACACTTACATCTTGACCTTCTTTTGTGCAA TAAATCTTTTCACTTTGTTTGTATGCATCATAGTTCCATAGATgagattc aaaaaatttcttctgtttttagttttctcagctcaaacttgtcagaaata aaaaaaaaattaccaaagtttcttttctgtttacattttttcggGTGATT TTTGATCCTAAACGATTCAGCCCAATCTCCGTAAGGTAAATTTCCCGCGG atcacgtaatagattccgtacgtaatagatagcttcttgcttaacctcgc tattatcctttttctttccaatgaaaaagattcgattctttgaaaagtca TGAAACTTAAGAGATTTACTTATAAAGAGGGCAACTTCTTTCTGACATAA cctttttctcaacttcagttgagctagaatctgaaaatgtgtctgtctgt ctgtctgtccgaaaactttggggcaggctggagacttcaaaaatgatcgg atttggctgaaatttggcacacttgttccttgggtgaatatctgggggtg ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttt catttttaagggcgtggtcacgagttttcgccaaaacgaggctaaaactt tggggcaggctggagacgtcaaaaatggtcggatttggctgaaaattagc acacttgttccttgggtgaatatctgggggtgttttttttattttttgaa aattttcatttttaagggcgtggtcacgagttttcgccaaaacgaggttA AAACTTTTAGGCAGGCTAGAGACTTCAAGGGCGAATCCCTGTGGGtggtt ttcattattttaaaatttccattttaagggggtggtcatgagtttttagt tgaaattggttacaattttacaattgagcctacgaatgatttaaaaacac tgaagttgagcccagtgcggttagcacttTCGACAGTTTATTAAGTGACT CCCTTTCTTATCTACCCTCTTTATTACTACATGTAGCTTTAAACATGCTT CCTTTCAGTTGGTAACGTTAGTCGTATAGTTATTGATGAGGTGCACTGTG CAAGTCATTGGGGCCATGATTTTCGACCTGATTACAAAGTACTGGGTATA TTAAAACGACAATTCCCGAAACTCCCCATCCTCGGGTTGACTGCCACCGC AACGAAGAAAGTTCTTGATGATGTTAAGGAGATGTTGAATTTAGATCGCA CTTGTATGGTCTTTCGTGCTTCCTTCAATCGACCTAATCTTTTCTATGAG GTGAGTTACtgaattgaaaatataaaccaCAAGGTTTTATACTGTTCAGA TATCAGTTACTCAATTGGCAAAGACTTTTCTGCAGAATCTTAGTTTTGTC GACCTCTttcttaggcaaattttctttttataagaaataacGCCGAAACG TGTTGTCTTATTTTATCGCCCATGAGAAGTCAGCTAAAAGCAGGGTAATA AAGTTTATTGTGTAAGCAGGAAGGCTGTGAGAGGTTCATCTGTAACCAGT AATTTCCCCGTCTTATTGATCCAGGTACACCAAACTTGTTTGGATTCAAA GGATCTTATCAAGGAAGTTTCAAATGTCATCAAAAGAAGGTTCAAAGCAA TGTCAGGTATATTTGGCAGAATCACCATATTTATTGATTCGTAAATTGTA TAGGAATCTTCAGTTTTCACTCTTAAGTCAATTCTCGGGACtaaaaaaat aattgtaaaCTGATAAAGATCagattattattttcaattatttttaaaaa aatgaaaattaaataaaggatATTTTTCTTCAGTTTGATATCTACATTCC ATTGTGTCAAATTTTTGAACTGTTCTTTGGTATATAAAAGGGGTGAATTA TTTAGCTTTACTTTACttgaattgaaaataattttcaacttTGATATACG AGAAACATTTGCATGACTGATGTTTATGATACATACTATACGAAGTTTCC TGTGCTCAGAATATCTTAGCTTGATGAATGTTTTTGGTCTTGCTTCAATT CTTTATTGGATTAAATTGTTATTTGGTTATGGATTTTTCTAAACTTATTA TGTTTCTCTTTGATCAGGAATCATTTACTGTTTCTCACGCAAAGACAGTG AAGAAGTAGCACATGGACTGAAAGAGCGTGGTATAACAGCTCATTGTTAT CATGCAGATCTGGACCCTAAACTAAAGTCGTACATCCATCAACAGTGGAC CAATGGGGAAATACAGGTAAAGTGCTCGAATTCCATCATCCCCATGGTTT TGTTGAATCTTATTTAAATATCAGAGATTGAGTTTCTCACTTTCACTCCT TGAATTCTTTGCCTTTTTCTAAACTTCAGTAAAGTCTGTTTGAGGGCATA TATCAAATCTTTTGGCAGCCTTCAAAAGTGGTTGATTTAGGCTAGAATTC CGCACAATCgttcttttgggtatttttttcGAGCCTGAAAAGGTGTTTTC ACTGCTACTACAATTGGTCCccgaaaaagttttaaaagataCTGCAGTTT CGCCCAGTGCGGTGGGTACGCTTAAAAGTAAAGTTTTAGCGCTAATTTAA TCTAAGCTGGTAGGTGTATGGAACTAATTGAATCTCTGCTTCTCCCATCA CTGACAGCCTGGTATGTCACAAAAATAATGTTGGAATAATAGAAATAAAG GTTCTCTAATGTACTTTAATTCCCTAGATTTAGGATTTAATTGTATTgat attttcctctttttacagGTAGTTGTAGCCACCATTGCGTTCGGTATGGG CATCGATAAACCGAACGTTCGATTTGTCATTCATTTCTCCATCAGTAAAT CAATTGAAAATTATTACCAAGAAAGTGGCCGCGCGGGCCGCGATGACCAG AAAGCTTGGTGTATACtatactttcgatttcaagacATCTTTCGACAGAG CTCTATGGTTTTCACTGGTAAGCTTttatacccccccccccccccccttt ttccgTATATTCTTTTCATGATGCAAAGCTGTGTGATATTTGGCTATATT TTTGTGTTGCGAACAAATGGAGATTTGatcagaaaaatgcaaaacCAGTT TATTTCGGGACGAACAAAGGAGAGTTTAGTTTTGAGAACCTCCAAATTTA CATAGTTTCGTAGGATTTGAGATTCCTTACTGGTGATTCACGTTAAATGT TTTGCCCCTCATCATTTTACAGAGAAAATGGGACTTCATAACTTGTACTT GATGATCAACTACTGTCTGAACAAGACCACCTGTCGTCGCAAACAAATTG GtctttttttctctgaaaactGGGAAGCGAATCAATGCAAAGAAACGTGt gatgtttgttttgaaaaagctGGTAAGTCTCTTGAANGTGCAAAGAAACT TGtgatgtttgttttgaaaaagctGGTAAGTCTCTTGAATCACCAACTCA AGAATAAAATGTAGATTAATTGATCTTCTTCTTTTGCAACTCAGATCTTT TATAAATGATaaacgcaattttcagattcaaaagGTCTAATCAATACAAT ATGCACAGGAATTACATTTTATAGTACCTAGTAGATATTTGTGTACagtc aaaatttgaataatttgtACTTTAATCTTTCTTCTCGTTTCAGAAACGAA AGACTTGATACTGAACAAGGATGCGCTCAATTTATTGGATATCTTAGAAA ATGCGAAATACAAACAAGAAAGGCTAACTCCACTAAAGGTAACACTTTAT TAAATTACCAGCAACTGAATATCCCTTCAAATACGCTACTTGTATTCTAT ACTTTACCTTGGAATATGGGCTATTCTAGAAATAGTCTGTAACCTCTATA TTGAGGCGGTCTGACGTCCTAGATAAAAAAACAGGGGGTCCCACTTTTCG GATGTGATAATCCAGGGTGGTCACTAAAATAAGGTCGAAAATCTAGGGTG GTTGAAAAATGAGGACAAAAATCCTaggggtcctgaaaaattgaaaaaag agtcCCGAAAAAGACCTCCCCAACATAGGTGGTACAAGTTTTTTTCTGGG TTACCCAAATAGTCGtaagttttagaaaaaaattttgtggtCATTTCATT GTTAATCATTGCATTATTTTCAGTTAGTAGAACTTTGGCTTGGAAAAGGT AAAGTTTCACTACGCAAAAAGCAGGCGAGCTACCCAAAAGAAATTTGCGA GTTGATCGTGGCGAAGTTGATAGCGGAACAGATCCTGACGGAAGATTTCC ATTTCACACCGTACAATACCATCACTTACATTTTGCCGGGTCCGAGAAAA CATTTGGTCACCACGTTGAAAAAGCGGGGAGGAGATATTATCTTTCCGAT ACCGTGTAACAGTCAAATGGTGAGTATAAAAAGTACTTCGGTTCTCCCTT TGTTGTTGGAAATTATCAgggttattattattttttttaattatcaatTT TCGCTTAATAGCAGATTCGAATTTGAAGCACAGTAAAAAATCAGCCAAAT TTAGGaaataacttttaagagtgaaattatcgaatttttcaaattttgtt aacTCACTTTCTTTACTCACTTACAACGCATTTTTGGAAGGCTGAAAAAC TTATCCTTGAGGGCGCGGTCCGTACGGCTGGTTTTCTTCGGGCATGGGAT GGAATAAAATCACCGTTGTTACTTTAGTTTTCATGTTAacactggcggat ttaagacaatagagcaattACGTCAGAAACATGTGAaggaaattacaatt acaaatctattCATCTAATATGTTCGTCTGGGTCTAtggttttaagtttt tctttattGCGCTACGTACAACGACAAAATACCGTAAATTTGTTTTAATA TCTCACAGGGAAAAGACGGATGCAAGAAAGAAGATGATGAATCAACCAAT CAGAGCACTAGAAAGCGTGTTTTAAGTGAAAGTGATGACGAAAACGTGAA AGTTAAAATGGAAGAGGAATTTAAGGACTTAACATCACCAGTCACTTCTT CACTGAAGAAACAGAAAACGAACGCCATTATTATCGATTCGGACGATAAT GATGAGGatgattttgttttataaacTTATAAACTGTATTTATCCTTATA ATGGAGTCAACGTAAGCATTAGTCTATTCATGCGAAGGGATCTTGTACCA ATAGGTTGGAACAgaatggttttgtttttttgtattcACAGATTATTTAA AGGTActattttttaatcttttgtacattttgtaAATAGAGATATTATAT tgaggctcggaaaacacgagttaaaaaacacgagttaaaaaacacgagtt acgttaaatgtgacgtcatcaatgggaaattatgacgtcacaagtagatc atttaactcgtcaatttatggtgcgccttaaactgacgagttaattaact cgtcaatttatggtgcaccataatcttacgagttaattaactcgtcaatt tatggtgcaccttaaactgacgagttaattaactcgtcaatttatggtgc accataatcttacgagttaattaactcgtcaatttatggtgcaccataat cttacgagttaattaactcgtcaatttatggtgcaccttaaactgacgag ttaattaactcgtcaattaatggtgcaccttaaatcatagaggtataaag aaaacaggagttgaatgtgtcggtaattggtcgttaaagtcttttgattt cttttataaaatgtatcaaaagaaattctaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013392TCONS_00013392Clytia hemisphaericatranscript
TCONS_00013393TCONS_00013393Clytia hemisphaericatranscript
TCONS_00013394TCONS_00013394Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013392-proteinTCONS_00013392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:341646..351226 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RECQLPREDICTED: ATP-dependent DNA helicase Q1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.8 5.75 2.15 1.93 15.7 12.63 15.83 15.43 11.37 12.89 8.36 7.7 7.65 7.42 6.68 7.57 7.69 7.03 5.63 5.72 8.53 10.31 10.52 10.53 8.58 10.05 5.44 5.64 7.29 7.82