XLOC_007122 (gene) - C. hemisphaerica

Overview
NameXLOC_007122
Unique NameXLOC_007122
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000147:100524..103948+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007122 ID=XLOC_007122|Name=XLOC_007122|organism=Clytia hemisphaerica|type=gene|length=3425bp|location=Sequence derived from alignment at sc0000147:100524..103948+ (Clytia hemisphaerica)
gTGTGAAGTGTGAAAATTTGTCATTAAATTGTTCGAAAGACTTTCTAGAA
AACACCAATACTATTCTCTAAAAGACAAACATGGAAATGATACAACAAAA
AGTGATCATTTTTGCGACTTTCATCCATTTAATCATAGCTGGGAAAACAT
TCAACAATTTCGGTCAACAGGTTCCACAAGAAACACCTTTTAACATTGTG
GATGTTCACCATGGACAACAAAGATGTTTCAGTATTTGCACTTACAGCCA
AAGATGCAtggcttttttaatcaaaaccaAACCTGATGGCAGCGGTGGTT
TCATATGTCAATTCTACGATCGGTCAGTTCGTATGTTAAACATGGCCATA
TCCTCAGTTACCGGAGTAacgttttattcaatttatgTCAATCTGAATAG
CTGTGCTGATTACTACAAAGCCGGTTACCGAAAGAATGACCTTTACGAGG
TGAAATTTTCGAACGGTACTATGGGACATGCCCAGTGTTACTTAGAATAC
AAGGACTGCTGGGATTGGCAACACAATCATCAACATGGAGACGTTTATGT
AACAAGAGAAATAGCACTGCCTTCAAGACTGGTAAAGGTAAGGTTAATGT
GGTACATTTAAAAATATACATTCAGTTTGAACGGATTTATAAATGACACA
AACAACATGAAACTTTACAAGTCCTACAAACGAAGACTTAAATTTTCACT
TTGCTGAAATTCCCTTTATAGCAAAACCTGACAGGGGGTTAAATTCACAC
TTTTAGGTGAGATATATTTGAACGCTCTACTTGTCGGCTACAAGTAATGG
CTAATAAGCATCCTTCTTGTGTTCTCAGACAATTTTAATGACTAGCCAGT
ATATtgcaacagaaagttttaaagctTTTCAAGCGATGTCTTTAACAGGT
GTTTTTCTAAGCCTTCCGAGAGAAAACTGACGTTTAACCCTATCAACCCC
AAGCTTTTTGGAGTTGTGTAGCCTGGGGCGGaaaatctaccaccctcgat
tatcttttatctagaagagctatgccCATAAaaattggtacagatgttct
ctaTAATGACACAGCACCTCCGggaagaaaaataatttgttaacGTCATT
CATCAAAAAGCTATGACGTTATCACAAAATTCCCACCTGtcagaaaaaag
cccaaatgtATGGTTTACACAAAAATGtggtcgaaccaataaagatagtc
agattttgtttgaagattctgaaagatagAAGGTGTTTCTTTAACACAAT
AACCGGTTTTTTGTATTTCcattaagttttttttgttaaaatccatgctt
aaaataaataatgacgtcatcatttttcatttttatgaatttGTTTAATT
AACATTGTCAATACCTATCACGTATCAAAGTTTGATTATGGTTAAATAAA
TAGTCCAGGAATTATCGGcatcttaaaattttgagttttattaaggcgat
tttagctgggttttatgtcatgtttcacaatcaAGTCATTAAGCCTGATC
TGGACGCCCTACGACCAGGCTACGACCCTAAAAATTTGCCTTAATAtcct
taataagattttattaaaataaaagtCAGTCAGAAAGTTTCGCTCCAGAA
TCTTTCCTCAgagatatacacaaaagaacaCCAGCGTGGTATATTCTATC
CCCCCCGGGCTAATAGGGCTAAATTTGGCATTTGCATCAAAAGCCTTCAG
TTATAACTTTGTCAAAGTATTTGTTGTATGTATATGAATATAAGttaata
aaaaagaatgaacttTATTTGATAATTTAAAGGTCCGATGTTTTGGTTCT
TGGACGCTACTCCAAAAACGAACTAAAGCAGGGGGGACGGTCGATTTTCA
ACGAACATGGCAAGAATATAAACAAGGTTTCGGtaaaatggaagaaaatg
aaTTCTGGCTTGGTAATCAAATTATCCACGAAATGACAAACCGAGGTATT
GGTTACAAGATttatatttgggcaaaaaattttgatggaGCAAAGGGGCA
CGCATCATACACAAACTTTCGTGTAGGACCCGAATCGGACAGTTATAGAC
TGGAATGTGCAACAGCTCCAACTTTCGGACAAAACGCTCTTTACAACGGC
AATCGTTTTACGACTTTTGATCGTGACAACGACCAATTTCAGTCAGGAAA
TTGTGCAGCATACCAAGACTTAAGCGGAGGTTTTTGGTATAGTAGCTGTG
GAGGGTTTTACCCAAATGGGCAATATATTCCTTATAAAGATCCTAGTAAA
ATAAATGGCATTGTATGGAATGCTTGGATTAACAAACAAGAGAATTTGCA
GAACATGGAAATCAGAATCGATCGAATGTCATAACAACAAGATGACTCAC
TACATATAATAGAACGTTCTCAGCTACCGAATCCTCCCACCTGCCCAACC
AGCAATACACATAATTCAGTACCATTCAGGGTTAGTAGCTTGGTTTGAAA
AGAATTCTTTTACACTTTGTTCatttgttgtattttttacactttttttg
ttCAATAGCTTCGCAACATTTATTTTATAATAGCTTAAGATTTATAATAT
CTGAAGACTTATAATACCTAAAGATTTATAATATCTAAAGATTTGTGTTG
CATTAGAACTGATGAAATTGTTTGTAAATTTAATCGTTTCAacttctata
tattaatagccgtagtctgtatgtcattttgtttgtcTGTCTGTCCGTgt
gttactttcgttttcggcacAGAGCCTGATAGAGCATAGGTAAGACTTCG
AGTGCGGcctttattttaaaattaaagcCCCATCTACATTAagcaatttc
aatttctgcctTTGCTTGTCCGCTCTTTCTTCTCTCATTTTTACATCTTT
TCGAATGTCATTAACGACACTATTTGATTattgacattcgaattcttttt
aaattcaaaacaaaaaaatatctttattcATAAAAGAACAAATCtcaaat
aaaacataaaaataaaaaatactgcATGTTTTTACCGGCATTGCCTGAAG
AATCTCGTGTAGTGTTTTTAATTTAACTTCTCTATTTTGACATCAAAGCT
CTTGAAATCGTCGAAAGTTAGACGACACATTTAAAGCGAGCAAAGCTGTC
GTGGCTAGtatattatttgaaattttttatctgAATTTAGTCCCAGTATC
ATACCTTGATTTCCTTTGATTTCTCGAACAAAACATCCTCTGCTTCTTTA
ACTTGCTCAATGGTAATTGCTGGTCGATCCGGCTAAAAGAAAaggagaaa
attcaaaattcaaaaagttattcaacggtttttacaagaacgtgagttgt
ttttttatgttttttcgtTTTGGCCGTGAATGATGAAGCTGAAATAATAA
AGTCTGTCTCCTAATAATCTGCAGCGGAAGACAAAAAAGTCTATAACTTT
TAATAGAATACGAACTACATACCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012678TCONS_00012678Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012678-proteinTCONS_00012678-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:100524..103948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.3	0.57	0.65	0.24	0.17	0.36	0.28	0.31	0.26	0.07	0.12	2.34	1.64	0.38	0.23	0.62	1.08	2.95	5.15	1.9	1.91	0.7	1.17	1.44	2.85	0.2	0.21	0.08	0