XLOC_006609 (gene) - C. hemisphaerica

Overview
NameXLOC_006609
Unique NameXLOC_006609
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000132:250925..257056-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006609 ID=XLOC_006609|Name=XLOC_006609|organism=Clytia hemisphaerica|type=gene|length=6132bp|location=Sequence derived from alignment at sc0000132:250925..257056- (Clytia hemisphaerica)
CGAAAAAGGGAAATTTATTTTCAGTCACAAAATGACAGTAGAAAGTTGTT GTTGTGTAAAGCCGTATGAAATTTAGAGGTTCGTAAATTCCATAACATTC GGATTTGGTCGATTAACATAACCTCTGAATTATCTCTTCAACGGTATAAA ATTTGTGATGTGAAATACTTTTCGCTCTGATTTTCGTAAATGCTTATATC TCAGCGTGAACATTTAAAATGCGCGATTATCCAGATCATCTCCTCGATAC TATGAATATGATCTAATTCTCGACTTAGAGAAAGCTGTGTGAATGTTGGT AATACAACTTTTCTTGGTAGGAGCAACAATTATCAACTCATTTCGCTTTG GAAATATAACTTGAATCTTCTTGAAAGTTGAAAGTTATTCAATGAAGTAG GGAAAAAGTAGAGTTTAGAGTAAACATCGAGAAGAATCTCAGATAACTAT GATAACATTTAGTGGTGTTTACTTTTAGCTTGTAATGTTTGACAGAATAT ACATACAAACAATCATTAAAGAAACATTATAGTATAAAGGTATCAAAAAT GATTGGTGGTAGATTTGGAACAACAAAGTGACATGGAACTGCTTACCGGT ACGTAAGAAATATTGGTGATTTTTCAAGTTTGAAGCATTATCAATAATTT TCTCGAAAGCGATATTGAAAATACTTTTTAGTCGATTTTTGAACCTGACT CAAGAAAGAATCAAGGTTAAAAAACCCTAATTGTTTTTCGAGACATTGTG GGTGGTTCAAGTGGTCTTGTTGGATTTAGTGCTTAGAACATTTCTTTCTC GTCCTAAAACTTATATTTATAAAAGTTTAACAGTTTTAAACTCTGAGTCC GAACAATATTTCGTTTTAAAACTAAGGTCTTATCATTACGGGTAATGCTA AAAGAAATTATTGGACGATAAGGAAGTCCTTAAGTAGGAATTCGGTATTT GTTTTGATCTTTCGCCATTAACCTCATACAAATAGCGAATGAATATAATT AACAACCACTTAAAGATATTTTAAAGACTTCCAGAATCATAAGCGTTTTC CTGATTGATGAATTTAATCTCTGCTTTTTGCAAAAGTTTTACATTAAATT GCATCATTAGGAGCTGGTAAATCTTTTTGTGTTCCCTTGAACGCGGAAAG TACTTAGAAATCGTTAAAAATCGCTTTTCTGTCAATTTTGCGGTAAATGA CATCTAATCAATACGATAATTATTAGCACCTATACATATTCACAATAATC AATCTGTTATTGAAAAATTAAAATGTACACATTTCAATAGTAAGGATATA CAGGGATTGATTACCTCAAGTATATCCAACTTTTCATGCCAGAAATTTCC TCCAGTAGTCCATTAGGTAGAGTAAACGATACCTTTGGTTGAGACATACA AATTAAATTTGTGTTTTCCAAAAGAATGGTCTAGGAAAGCACACAATTAA GCTACCCCCGATCCGTCTAGCAAATGGAATTCCCAAGAAAGATGAAGTTG TATTTAAATCAACGCCTCAACAACCGCAACGTCATCGAAATAGCGGATTT TTAGGGATTTTCTTAAATTTTACGAGATGAAGGCATTTTGTATCATTTTA CAGGGCTGATCCAAGACAACATGATGAATACGCGTCGTTTGAGCACAAAT ATGATATGTTTATATGGAAAAAGTTTATACTGTTTTGAAAAAACTGAAAT AGAGTGTCTTACGGTCCTTGAGGCTATATAAAATATATCTCCTCTTCTTT CAGGCATACTCATAGGAGTGGGTGTAGTTTTAGGTTTTCTCCTAATTGTC TTTGTCTATGCTGTCCGAAAATATCTTTTGGTTCGGACAACCCGTTTCAC ACTACTAACCGAGGAAAAGGAGACTGAAGATTTCAAGAAGTTCAAAGGAG GCTCAGAAAGTGGTTTTGAGGTTCCCTATTATACGCGTCCTGTGAGAAGA CAAGTTCCAAATTTCGGTTTGAGAGAAGGTCCTTTAAATGAGGTAGGTCT TCGAACGTGAATTTTTTATCAAGAATGTGAAACCAAGATAAAGAGCACAA ATTACCTTTTAAATTTTTTAAATTTTGTTCTTTGTGCCGCTGTGAATATG GCTAAGCACGCCATCGCAATCCTAAGAAACCTCTTATTGACCGAGAATTG GAGATCAGAAAGAACATTATATCACTAGCTTTACTTCTGAGATACGATGA TAGAGTAATCCAGCTCTCCATTCTCCTATAACCTCAAGCAAACTTACTCT GGCATGTGTTTCATATTCAAAATGCAAGAAAACTCCTAACCAAGAAAACA TGGTCATTATTCATGTCTTTGAGTCAATTTTCTTCTCAGAAGCGAAAAAA GTCCTCAGTCACCGTCTTAGACACACAAAGTTTCCATTCCGGACATACCA TAGGAGGTCGGCGTAAGAAGAACTCCAGGGTGTCACACAGTTCCATAGGG GACAAAGAGAACCAGCTGGTGGAATCAACCCTTCCTGCTGACATCCACGG AGATCATGACGTGTTTGCGGAGGCAGCACCCAAATTTGATAAAACACAAC GGAGGATCAGTACGGCCGTGATCAATGTTTTAGCGCTACAGGGTAAACAA GGTAGGGCATTAATTCTTCTTCTTCTATTTTACAATGTCGTACTAATTAA TCAACATAAATTTGAGTTAAGTACTTAGCTCAAGCCTAAACTGAACATCT AAAAACTAATCAAGAAAAGCTTGAGGTCTCTTTAAAAAAGTTTGATTCTC TGAAAGGAAAGGAAACATAGACATCTTTAAATATCTTCAACCGGAAAGAT CAAGAATTATCATTTAAAACAAAACAAATTTTCCACATCTTTANTCTCTG AAAGGAAAGGAAACATAGACATCTTTAAATATCTTCAACCGGAAAGATCA AGAATTATCATTTAAAACAAAACAAATTTTCCACATTTTTACAGCACCAC CGTCATCAAGAGTTTCAATCACAGAAGATATGTTTATAAGAGATTTGGAA ATTAACAACGATACCTTTCTCAACGTTGACAGAAACAGCAATGATGGATC TAGTGTCCATTCCCTTCCCGATGTCGTTGATTGCCCTAGCGTTGGCACTG GCGTCAAAAGACGCGTTGTAGATCGCCGACAATGTGGATCCGATAACACG CCTTTAAAACGAACGTATAAGAAGTCAGGGAAAATTAAATTCACGACCAG ATATTTTCACGAAGATAATATGCTAGAATTACACATTCATAAAGCGTACG ATTTGAAGTTGAGAAAAGAGCAAATCAACCCTACTTGCTTTGTCCGAGTA TACTTAGTACCTGGTAAACGACAAAGAAAAGAAACACAATCTGCCAGAGG GCTTGAACCGTTTTTTAACGAGAAAATACAATTCGTAGATTTAGAGGAAC GCAATTTGATAAAATACCGAATCAAGATGAAAGTATATAATAAGGAACGA TTGAAAAAGAAAGAGCTTTTAGGAGAAGTTGGAATTGCTTTGAATTCCAT CGACATCAATCTGAAAGAAACATTCACACCTGATCTCTTCTTACAACGAT CTGAGGTAAATAAAATCACAATCATCATCTGTAATGCTCAAGGCTGTATG TTAGTGATGTAAGAATGAATAATATAGAGTTTTAGCTAAAAATCTTCAAT ATCTACTTACTGAAGATTGTGGCAAACACCTCTTTCCTCAATTAATGTTA TTGGTTTGAAGGCTTCTTTCAGAACTGGATGACATTGATAAAGAGGTGAA AGAATTGACCACAGTTTTAGTCAGAGAGATTGCAAAGTCATGATGAAATA AACTCTGTTAAAATGATTTCAATCTATTTTGCGTTTCAGAGTTCGTTAGC ATCAGTGAGCATATTGTTGTGTCACCAAGCCACATATAACAAATTGGAAG TTACCGTTCAAAAGGCTTGTAACTTGCCACGAATTGGGATGGGCGGACAA CCAAGTAAGTACTTAATCACCCCAAAACCTGCGGATGACGTAGGTCACCT TAAGTTGACTTGTTCTTTTATCGCATTCGCCATCAACCGTTTATTATACA TAAACAAAGTTAAAACAAATCAAAATTTAAAATCTACTAGGTCCAAAGCT TCGTTTTCTCTCGATCATTTATCCCGATCTGTGTTTTGGAAGGGATGACA TTACTATAACAAGTAAGATTAGAACATTAAGGTTACCAACTTACGAGTAA CTTAACTTCTCAACCTTCATTCAAAGGTACATACGCCACCGTTCAACTTT TTAAAGAAGATTCAGTAGACAAAAAAGACATCGTGGTCAAGCGAAACAGC CGTGATCCCGTCTTTAAAGAAATGGTGGAATTTGACGTAAACATAGACGC TAATTGTCCTTTATCACGTTACTCGCTCGTTATCTCCTTAATACACAAGG CAGGGATCGTAGGGAGAGATGAGATTCTAGGTCACGTGATATTCAGTATT TCGTCACCACAAAAGAGTGCAGCGGAACATTGGAAGTTCATTTGCGACAC TCCGCATCAGCATTTGGAACAAAGTCATTCGTTGGTTGACCCTGATGAAT TGTTAAACTCAAATGAGTCTTCATCAACGTGAGAGAGTGTTAATTATTCA GGGGAGGATGTTGATTGGCCGGTTTCACAACACGAGTGCATGGTCAGAGT CTTAGAAAGGAACACAAATGGTCATGACATGAGATATACGTCTGAGTATG AAACNATCTGAAAGAAACATTCACACCTGATCTCTTCTTACAACGATCTG AGGTAAATAAAATCACAATCATCATCTGTAATGCTCAAGGCTGTATGTTA GTGATGTAAGAATGAATAATATAGAGTTTTAGCTAAAAATCTTCAATATC TACTTACTGAAGATTGTGGCAAACACCCCTTTCCTCAATTAATGTTATTG GTTTGAAGGCTTCTTTCAGAACTGGATGACATTGATAAAGAGGTGAAAGA ATTGACCACAGTTTTAGTCAGAGAGATTGCAAAGTCATGATGAAATAAAC TCTGTTAAAATGATTTCAATCTATTTTGCGTTTCAGAGTTCGTTAGCATC AGTGAGCATATTGTTGTGTCACCAAGCCACATATAACAAATTGGAAGTTA CCGTTCAAAAGGCGTGTAACTTGCCACGAATCGGGATGGGCGGACAACCA AGTAAGTATTTAATCACCCAAAACCTTCGGATGACGTAGGTCACCTTAAG TTGACTTGTCCTTTTATCGCATTCGCCATCAACCGTTTATCATACATAAA CAAAGTTAAAACAAATCAAAATTTAAAATCTACTAGGTCCAAAGCTTCGT TTTCTCTTGATCATTTATCCAGATTTGTGTTTTGGAAGGGATGACATTAC TATAACAAGTAAGATTAGAACATTAAGGTTACCAACTTACGAGTAACTTA ACTTCTCAACCTTCATTCAAAGGTACATACGCCACCGTTCAACTTTTTAA AGAAGATTCAGTAGACAAAAAAGACATCGTGGTCAAGCGAAACAGCCGTG ATCCCGTCTTTAAAGAAATGGTGGAATTTGACGTAAACATAGACGCTAAT TGTCCTTTATCACGTTACTCGCTCGTTATCTCCTTAATACACAAGGCAGG GATCGTAGGGAGAGATGAGATTCTAGGTCACGTGATATTCAGTATTTCGT CACCACAAAAGAGTGCAGCGGAACATTGGAAGTTCATTTGCGACACTCCG CATCAGCATTTGGAACAAAGTCATTCGTTGGTTGACCCTGATGAATTGTT AAACTCAAATGAGTCTTCATCAACGTGAGAGAGTGTTAATTATTCAGGGG AGGATGTTGATTGGCCGGTTTCACAACACGAGTGCATGGTCAGAGTCTTA GAAAGGAACACAAATGGTCATGACATGAGATATACGTCTGAGTATGAAAC AGTTTTCGGTAGTTAGTACATACTCAAAATTCTGGTTCATTGATAAACAT TTAAGAAGCTAATGGTTTACAACCCGATATAAAGTTGCATGGAATAATGG GAACATACAGTTAGTGAACATTGTCAATATTTTGAAACTTCTTTGATTAT CAAATTTCTTTTAAATGATAGATTTTATAAATTTCAAAACAGAAACATAT TACCATTTTGCATTTCATACCCTTCTATCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011778TCONS_00011778Clytia hemisphaericatranscript
TCONS_00011777TCONS_00011777Clytia hemisphaericatranscript
TCONS_00011776TCONS_00011776Clytia hemisphaericatranscript
TCONS_00011775TCONS_00011775Clytia hemisphaericatranscript
TCONS_00011774TCONS_00011774Clytia hemisphaericatranscript
TCONS_00011773TCONS_00011773Clytia hemisphaericatranscript
TCONS_00011772TCONS_00011772Clytia hemisphaericatranscript
TCONS_00011771TCONS_00011771Clytia hemisphaericatranscript
TCONS_00011770TCONS_00011770Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011778-proteinTCONS_00011778-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:250925..257056 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73 0.37 0.3 0.09 4.97 4.92 24.35 24.04 21.74 28.6 13.73 13.08 21.82 18.22 32.22 19.94 7.71 9.03 10.54 11.11 4.55 4.48 3.1 3.68 5.63 6.02 3.59 4.76 0.34 0.24