XLOC_006541 (gene) - C. hemisphaerica

Overview


Name	XLOC_006541
Unique Name	XLOC_006541
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000131:346041..353264+

gene from alignment at sc0000131:346041..353264+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_006541 ID=XLOC_006541|Name=XLOC_006541|organism=Clytia hemisphaerica|type=gene|length=7224bp|location=Sequence derived from alignment at sc0000131:346041..353264+ (Clytia hemisphaerica)
CTATGTTTACATCTGGCTTACATTTTTTACTCtcaataatattttgattt
tgaggtCAAAGTCGAGCAGGCGGAGAAACTGAATAAACCAAACTCAACCA
AATGCCAAACTGCCAAACTGAACTGCCAAGTCACCTCACAGCAGGAAGAA
AGtgagaagaaagaagataaTAGTGAGGAGTATAGGTAATAgatcttcaa
atttttcttttatatgcCAAACTTATGTAAAATTTAAACTGTGAGTGTGT
GATAAAACTTTCTCTCTATGCTCTGTCTCTGAAAAAAACTCTTGTCACTT
GTCTATTTCCTCtctttccaatattttaaaCTTCTGTGGATTTGAACTTA
GTTTATTTTagttatagaccttttcgcctttccatccaccatattgaatt
gtatgcaaaaattatggtggccgaattgccgtggtgaaattcatccctta
gaaagtatgcaaaacatatgcaaaaagaaagtattaatataaaacttaca
tgcataattggcattatattaccagacggtgtcaatcgaacaacttcgaa
caaaaatcgcaatcgaaccaatggaacgtaatcgaatgcgatcgaataat
tgcgattcgattgtcgaacgtaatcgaatctcaatcgaacggccgattcc
tgggtaatattcgattgtgttcgattNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCAGGTTgactttttatgacttctaatggtactttttctaacgagtttga
ttactctgttctcacacttatgtcttttttttttcgcgtccttttccgta
attacttttatttatatttttaaagacaggtaagaaggcatattgatgta
actgatcgaacgtaatcgaatacaatcgaacgtaatcgaagcaatcgaac
atcaaatcctgggtaatattcgacaatcgaattgcaattattcgattgcg
ttcaattgcgttcgtttgattcggcgttcgattcgttcgattgacaccgt
ctggatattaaagtgtaatcttgtagaagaaagattaaatttgcttctct
tgaaaactaaaaataattatattcgctcatctcttagaacgtaagcactt
caaaaatcaataacattagacataacttcaaactgaaaaatcatcaGCGA
AGgtaaaaacaatccttattcggctgacggtaaattattctcctgggaat
agagccgcaaaatgatcaaatcaaaacattgataatctGNgttgactatg
ttcgattggttcgatcgattgtcaattacattggattaatcttcgatttc
gttcgattacgattatgttcgatgagtttgatgattgcgattaaattaaa
ttggatcactctgtcagagcttcttagcgtgggcggccgagcgcttaagt
accatactaaagcgaataaaatctaatacaattgaatcaatcgaacgtaa
tcgaatacaatcgaacgtaatcgaatacaatcgacagttacatcaaaatg
cctcgaaaatgtcaatatgaaaattgcgtaatcagagaacatATGTCTTG
CTCATTATAAAGAGGCCGAGACAANtttttggattaagaaattccatctt
ttattgttctaatgattataatatttatttataagatgctttgttgtctt
tttaatctttgtgtaaacttgtatatgttttgcatactttccaactaaat
ccaaccacaactttttcgttcctctatttttgcatacaattcaagatggc
ggatggaaaggcgaaaaggtctattagacaAGTCATGCAAGTGTGAGGTG
AAATTTGGATGCTGGATGTCTTTTTCCCTTTTCTCAGAATACTCATACTC
AGTGTCCAAGTGTGCTCATCAGTCagtcagtctaaacttaaactcctata
tcaggattagaaactaggctagtcttacctcttttatcttttcctttaca
acaatacaatgctgacaagttgacacaacacatgtgtacatgtattGACA
TTGACCCCTGAGagaagtggtctcttctacttattgcttcccagcgctct
cCTTTGCAgctttttatcaaatttccaccaatgaggttgccgcatttcaa
atGGCCCCTCTTTTTGGCACCagtggcctttcagtgccttgcacgacggg
cagctgtaaaatcccaccctccatatatttgtttcaatccgtgctTAGGT
TTTTTTCTCATATCTttaatttactgaagaaagtggGAATTcaatgcgag
agttagatttgtctacaaagtgccataaaaaatcattgaataaaagaaga
actttaaatcttaaatattttcattttgaagaataaagtgcaaaaaagtg
aaacatagaaaagtttttggaattgcatttccacttaaaacgcgatattt
agagttaaagtctgattttctcaggcttgtagggtcctgaaattttttgg
tgttgaaagcattctggatatactctagGAGAActaaaatggtttgggtt
tgaaatttgcctaagtctgcCAATGTGGTATTGCATTTCCTACTAAAATG
TGATAATTAGAGttttaaagtctaattttctcaggctaaattctcaaaaa
tggtttcaaatagggtcctgaaatcttttgNcaaaatggtttgggtttga
aatttgcctaagtctgcCAATGTGGTATTGCATTTCCTACTAAAACGTGA
TAATTAGAGttttaaagtctaattttctcaggctaaattctcaaaaatgg
tttcaaataaggtcctgaaatcttttggtgttgaaagtattctgggaaca
ctcaaggaaaatcacagtgGTTCACGATGGACCCGGGGGGgaggggggca
ctgggtttgcggactgacggtatgtgcgggccagaaattggcttttaaaa
ttgcacccttacagtgcagcaaaactcagtgaaaatcatacccttagagt
gcattttcccccaaattttcgatccctttctggccaaaaatggtcaaaat
tcggGTCAAAATTCtaagcatttttggtcaaaatatttttcaagaatttt
ctgaaatttctacccttacagtgcatctctagtttttccgaccctttcag
tgcatttgaaacatattggaaaaggtacccttagggcccgcacatacccg
tcggtcctcttgcccagctgccccccggGCAATGGACATATGCCAAAGTC
TGCTAttatgaattttatttctttaggaaGAAAACTCAAGCTTACTCGAA
ACATTGTGtttttagaatgaaatacaattccataatggcagactcgAGTT
TTTCAGAGAATGAGGAATTACCAGCACGATCATATACGATATCTCCATAA
TCTAAGTGTGGTCTATAGGTTTTGTATATAGTGACAAGAGAATCCCTGGG
TAGAAGCTTGCGAAGTCTGCGAATAAGACCAATACCTTGATtagcctttt
ttattttttcatcaaggtgacggtcaaaggccagcttttgatcaagtatg
agaccaagatgtttttgatgatcctGAACTACAATGGCTGCATTATTGAA
CGTAATTTCTGAGGGGTCAGGTGGATTTAGCCTCCTGGTAAAGTACACTT
CAACTGCCTGTTTAAAAGGATCAGGGTTGAAGGACattttccattgatga
gcccactCATCTTCTGCATGTCACATGTCAATGATTTCCAAAACTTCAGA
Taataacagaagaatgaagaaacactataaagattcgaaatcatatggta
aacattcgaaaacaatagaatgtcttcatttctctCAAAATTAAAGAGAG
GGGAAAATGCGCGAAAacttttaccccccccccttcataATTTATTTACC
AAGCATAGGTAGGGTCAAGCATAAGTCGAggctttacttaagcatagtga
gcttcagccgaaatttatcgtatgcttataaaaaaatgagtgtatgATGA
TAGCTTTGCATTGattgagttttattttttattccgAAACTCCATTTAAG
GTAAAAGCCAAAGGATGTATTTTTTTCCAACGCCTACGTGACACCTCCGC
TCACCTTTTCCGTTNTTTAAGGTAAAAGCCAAAGGATGTATTTTTTTCCA
ACGCCTACGTGGCACCTACGCTCACCTTTTCCGTGTGATACTTTTCCTGT
GTGATATTGCTTCAGCCTGACTGGCCTGTTAGTCTAGACCaaaggataat
tttttatcaGGTATTATGATGAGAGCAAAATTATTTGTTTACTGTGTACT
TAAACAGCTAAATTGTTAAAAAGGAGGGAACTTTCTTTGATtaaaatctt
tcttctttccttcTTGGTAGATTGTTTGGAGGATCATTCATCACGGATGG
CCAAACCGAGATCAAGCTCACCAGTGAGCTATATTTCCAGTTCATCTGAG
GATGATATTCAGCTCAACGATAAAAACACACCCACACAAGCACAGCAAAC
ATTAAAAAGTCAAATCACCTCAGTAGATCCAATGGTACTGCCTGAGATCG
AAGAGCAAGCGAAAATTGCTAGTAAAAGTATTGATAGACTGATGAAGTTT
CTTTCTAAGGAACTGACTGAAGGAACGAAAGCTACAACTGATATTGTTTC
TGTTTATGATGGAACTATAGACCATGTGCATTCAGAAGTGGAACAAAATA
TCAAAGCCATGTATGGACTGATTGCTAAGTGTGAAGAACTTGATCGAAAG
ATGAAGCCTATAAATGAATTAGCCTCGCAAGTGAGGAATATACGAGAAAC
GCTTGACCAATTAGAAAATATATGCAAATGATTCGGTTTGATTTCATCGT
CTTTGGCACTGTTCATGCTTAGTCATCGAGTTTATGATTCAAAAGTCTAC
GTCATCgaaattgtattgaaaaacTTGCCTCagactttttgagctttttt
agAGAATGAATTCTAATTTCAACAGGGCGAGTCAAAGATCGTTAAACCAA
TTGCTAAAGTAGAACTGATCAAATATTATATGCTACTCAGGAATCACCCT
AACATTAAAAACTTAACATTGGTCAAGCTTCGGAGACCATCATGCCCTTG
GAATGATTTTGAATTATGAAAGGCGctatttcaatcatttttcaaatctc
TAAGATAAAATGATTCTCAGACCTTCACCAATGGCAATAGGGACTGCTTT
AATTATCATTTACAAGGGGGGGGGGCGGAGGTCATTGGACATTTTTGATA
TGGAAAGTATGATATTGTTTAGGCACACAGCTAACTGTTTGTTTATAAAT
GAATTTAGAATATAAATTAATAGAGGatttaaaataattattttaaagat
tttaatttgGCGTTATTCAAGTCAAGAAAATTACTCGATTGATACATTTT
AAATTAGTGAATCTATATTTTCATACCAATCAGCTGATTGATTCGAGgct
tgtaaaatcgctcgaaaAGTAAGAAGGGTGTCCATAAAAAAAGGATATAg
gatttttataaagaaagatTCTCG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00011658	TCONS_00011658	Clytia hemisphaerica	transcript
TCONS_00011659	TCONS_00011659	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00011659-protein	TCONS_00011659-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000131	supercontig	sc0000131:346041..353264 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.54	38.82	21.29	19.76	12.67	10.31	18.27	19.45	15.03	15.01	17.69	10.88	9.08	7.59	8.22	8.83	14.59	12.56	6.41	11.53	12.67	12.13	18.17	19.01	15.44	18.07	27.32	24.47	18.96	18.85

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XLOC_006541 (gene) - C. hemisphaerica