XLOC_006426 (gene) - C. hemisphaerica

Overview
NameXLOC_006426
Unique NameXLOC_006426
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000128:82074..85664-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006426 ID=XLOC_006426|Name=XLOC_006426|organism=Clytia hemisphaerica|type=gene|length=3591bp|location=Sequence derived from alignment at sc0000128:82074..85664- (Clytia hemisphaerica)
TTTTGAGATTGAACGTCATTTTCAGCCAATCAGAAGCGACCACGAACATC
AGAAGCAAAACATCTATAAAATTTTTTCTTGTCTCTTTAAATCAACATGG
AGAAATTTCGAATGAAGACGTTTTTTTGACTGAAAATTTTAAGGAAAGGG
AAAACATATTGAAATCATGGTAGAAGATAATATATTGAAAGGCAACATTT
TTTGCCTTGCCAATGTTGATGCGGAAAAGGTTTTAAATTCACTAGAAGAC
GATGAAAATCCATCACCAGAAATTATTGGTCGGAAGAGGAAAAGACTCGA
TGATTTCACACCACAAGAAAAAATGATAAGAAGGTAAGACTTTTGCCATC
AATTTCACCTTTTTTATCCAGTGTTTTCAGATAAGGATCATCCACTCACT
CACCAATTGAGTCAGTGCTTCAAATAATACCGTGAAAAAGGGTAACTTGC
ATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAATGACCTGGCTGGTC
ATTAAAATACAACTACGCAGCTCTGCTCGCAGCTCTACTCTACCATTTTT
GTTTTGATTTATTTTTGTATTTTAATGACCAGCTGGGTCTTTCATTTGAG
GGCTATGCATGTTAGCCTCCAATGATGCAAGTTAGCCTTTTTCACGGTAC
ATCACTTCAAGTCCCAACTTTCAAAGTTTATAAGTAAAAATTTCAATTTA
TACATGATACTTATGGTAAGATTTCCCAAAGAAATTTCTAAAAAATCCAG
ACTATTTTTTAAAGGCAAAGTTAATTAGCTAGGTCCTTTAGGAGTTGGCA
TTACAATTTTTGTTTGGATGTAAACGGGGGTAGGTAGGGTAGGTTGGAAT
AAATAGGGGGCTGGAAAAATTGAAATTGTACCTTTAAATACCTTTAAATA
CCTTCAAAATAAGGTAAATATAGACTAAAGCCTGGCTATTTAGAGGAAAA
TAAGGGGCTCCTCATTTGACGACTGACAACATTTTAACAAATTTATAAAC
AGGGGAGTCCTAATAAGGTCAGGGAAGGTTGGAAGAGAATTTTAAAACTA
ACAAGCGAGGGGGGTCATTTTTTAGACACAAGGGGTCACTTTTTAAACAC
AGGGGAGTACTGAACTTTTTCATTGTATTTCAGGAAACTAAAGAATCGAG
TTGCTGCCCAAAATGCTAGAGATCGAAAGAAGGAACGACTTGAACAATTG
GAACATATTGTTGATAGACTGGAGAAAGAGGTAGACATAACTAGCTGGGT
TATCTTTGATAAATTGATTCAATTGGAATTTTAAGTTGAGGGCTAGTTAT
AAATACAACTTATTTAGGTATCGTTCTTGATCTCTTCTTTGTAAATCTTA
TTATTAGGCTGGAATTGTTGGTTTGCCGTCACCTGACCAACCCTACCTCG
AAACCTGCCAACCCAAAAAAATTTATTGCCATTTTAAAGAAGATTTTTTT
TCCTTCAAAAACTTCAAACAATAAAAAATCAAAACTCGTATCTTGTTTGT
CTCAAGCACAAGAATCGTAAATTCCCTGCTAGCACTTCTGTTTTTTATTT
AAAATTATATAAATGTAAACAAACTGTTAACCCTTCCATGGACAAAAATT
TCGGTAACGGCAAACCAACAATTTTAAGCCCAGCCTTAGCCTTGAATTAA
CCTATTTACCAGGTCTTTTGCCTAATTGGTTCTTTAACCTAAACCCCAAA
TTATGGAGAGTAACTAAATATGTTTTGCAAATTATTGGAAGGTTGTATTT
ATTACTAGAATTGCTATTGGCGTTTGCTTTGAAAATGTTCATTAAAGGGA
ACGACGCATGGTATATTTATGAAATGCTGATCTAGCATTGGCACAAACAT
CCATACGGAGGAGTATTTAGGAGTGCTGGATCATAACAAAAACCAAAAGT
GACTTTATTCCAAAAAATATATTCAAAAAAGTGAATATAATTTACTATAA
TGTTCAACAACAACAGAAAAAGACTTACATAAAACTGAAAGAAAAAAAGA
ATGTCTTTTTCTTTTGAATGAAATCGAGTGTTTCTATTTTTAAATGAAGA
CATTCTATTGTGAATTTAGTGAAAACTTCTTTGCAATCTTTTTGTTTACA
TTTTGTCTTCATTCACTTTCGTTTACTGTTGAAAACATAACAAAGTTTTA
GCTATACTCTTAAACCGCGTATAACTGTCTGTTAAGCCAATCAGCTTCCG
GGCTGACATCAGCATGTATTTCAGAGTATACCATGGAAGTGCCACCAAAT
CCGACCCCTACTATAAGTATAGCGCTATTGCCTTTAAGGTAAAAACTTAA
CAACTTATTTTTTTTCAATCACAGAACAAAGAACTGAAAAAGAGCAATGA
TGAATTACGGACAAATATGACCTTCCTCATGTCACAAAACAAAACTATGC
GATTAAAACTGGGCATGAGTGATGGAGATTTTGAACAACCAAAAACATTA
AATATAACACAATCACCAATTATTACACCAACTGTCGGAGACCATGATCA
TATTGTGATTAAGAAAGAAGAAGAAACTGACACCGAGTACGCATCACTTG
GGAGAATTTCTCTGCAGCAGAAGCTTCAGGTTCTTCTTGTTTCATTAGTC
ACGATGTGGTTAGCCAATCCCAGACTGGCCAACTGCTTGACATCCTTGAA
CGAATCGGAGCAAGAAGTAGTGGTCAAATATCTCTTACAGAAGAAATTGA
TTCTTCAAAAGAGCAACGTCTCCAACAAGAAAGTACAGTTGATACAACTG
TTACTTCAAATGAATCTTATACCGATAATCCAGAATTGTCTACCGAAGAC
ACCACTGAATTATTTTCCCTCTGCCAAGAAATCCAAGACCTTGTGGATGG
ACCCGGCAATACTATAGATGAAGCAGACCTTGATGTTGTATCGCTTATTT
CCGAATTACCAGCTGAAGTTTCAAAGACAGTTCAAAAATCTAACCAAACA
TTCAAACCATCTCATGAGTTATCAGAAATATTTAGTCTTTTGGATTCTGA
CTCTGGCTTTGGATCAGAGGATGAAAGGACAGATTTTTCACCTTCCAATA
CAATTGATGATGATTTTCTGGACTTATTTCCTATTCTTTCTTCTGTCTAA
ATGACAAATTCATTCCTTTAAAACTTTATATCCATATATTTCGTTATTGA
AATTTGTACATAAGATTTATATTTTTCTGTTACACTTATCCACCAACAAC
AAGTTGACCTTGTTGTTTTTGGTTTTGATAAATTCACAAACAATCAAAAT
TGCATATAACAAATCAGATCTATTTTTTGAATACTCGATAAGGCCATGAT
GTATGCTATGCTTGATTGTTTGGGTGTTTGTACATACTTATTTGAAAATT
CTTCTTGGTAAAAAGAAAATTAAAATGTAATTTATTATGAAACAATAAAA
CACTCTCTCTAATTCATTCAAACCCTAATATAACCTTTATCTAGACAAGT
AAAAACCTATGGTCCACTTTATCTCATTAAGCGGATAATTGACAAGATCA
TATCCAATTTTTTAATAATATCTTATAAGAGGAACTTGGTCCTTGTTCCT
TGGAAATGTTGAACATATCAGTAAGATCTTTAAATAAGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011468TCONS_00011468Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011468-proteinTCONS_00011468-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:82074..85664 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
119.86	122.78	33.12	21.89	26.4	23.6	203.2	213.79	150.43	274.75	196.43	112.38	287.85	185.39	153.43	152.32	133.97	169.95	284.52	372.95	198.2	218.89	239.97	255.67	160.86	187.71	447.07	425.56	406.29	340.83