XLOC_006380 (gene) - C. hemisphaerica

Overview
NameXLOC_006380
Unique NameXLOC_006380
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:107762..113329-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006380 ID=XLOC_006380|Name=XLOC_006380|organism=Clytia hemisphaerica|type=gene|length=5568bp|location=Sequence derived from alignment at sc0000127:107762..113329- (Clytia hemisphaerica)
CTCACGCGAACGAAAAGAGATTGGTAATGAGTCTGGCTGTCATTCACGGA AAAAAGCCATCACATTGTAAATCGAATGTCTTCGATAAAAACACGGAGAA AATTTTTGAGGCGGATTGGGTAAAAAAAACAACAAAAATAATGGTCATTG AAGCTTCAAGGGCTGAAAATCTTCAACTCGGTGAAAAATGTCATGCCAGA GTACTAGGAGAACAAGATGATTTGGCAAGTTTTTACATTTTGGATCCAAT GCTTGGCTTTGAGACTCATAAAATGAAGCTTGTACCACTTCCAAAAAGAA AACCCGATTTGAAAGCCGTGAAGAATATCGTCTCGTTGTACCGAAAGTAT GGTGACGAACATTCAGTCCTCAATGAATTGATCATCTTACTTGGTGAATA TTGGAATGCTTATTGCAGGAATAACATCATATCTGATATGATGGGCTTAA AAGAACATGTAAGTGTTATATTCGTTTTCAATCGAGGTGAATCGATTCCT CTTGCGCAATGACGAGTTGTTTTGATCACGTGACCTTCGGTAGATAAGGA AAAAAGGCTCTTGTGTTGTGTAAAACTTTCCTCCCAGATGATGAAAGAAA CCTTGAAATCTGAACTTTGGCCCTCCCTTAATAGCAAAAAAGATTGCTCA GATGACTGATACAAAATCTCAAAATTTAAAATGCTATCTATGAGGCCAGA CCTACGTAATCAATTAAACTTTTCGAACTAATCCCAGAGCCAGACGGTAC TGTAAGTTCTAATGTCGACATTCCTCATCTAATTCCGACACCCTTTTCGG AGATAAGAATAGCAGGAAGGTTTTCCCTTCTGACCACTAAGTAAAGAAAA AAAGTTTCAATCAAGGATTCCGACCTTTCAATACACCTTTCCTGTAATTC GTAAAACAGAATGTGGATGCATTATTTTGATGCTCTCCCACATGCACCGT TTGGTCTCTACAAACCTAGACATAACTAATCGAACAATTCGAATTAATTG AATTTAGTCGAAGGTATTCGCAGTATTAGAATGCGATTAATCGAACTAAT AGAAATCAGAAAAATCTTGGAAAATTCAACTAGTTTGATGAATTTGATAA GTCTTCAATTAGTTCGATTAGTTCGATTATTGTTCGATAAGCGTTCGATT AAGGTTCGATTAATATTCTATCACTGTTTGATTATAGTTTGATGACTTTG AATAAAGTTTGATTATTTTGTTTTCTTAAATGCGCCACCATAGCGGCAAC TACAAGCGTGATTTCCATTTACTTTAAATCCCAGAGAGGTGAAACACTTG GATGGGAAATAAATCTACTTAATTTTCCATTCGGAACACCCGTGCGTGGC TTTTGCACAAATGCTGGAATCAAAGTATAATCGAATGTTAATCGAAGTAA ATCGATCAATAATCGAAGTAATTGAGAAAAAAAGTTGGAAAATTCAATAA CTTTGATTATCGTTCGATGGCTTCGTAGGGTGTCCACGGGACCTTGAAAA CCTTGAAAACCTTGAAAATGAACCACCTAACCTTGAAAACCTTGAAAACT ATCAATTTTCTGGGAAAAACCTTGAAAACCTTGAAAAATCGTTAAAAACC TTGAAAAGCACTTCTTCCTATTCATCCTTTTATCATACAATTTTTCAATA GGGCAGTGGCGAGTAACTCTTATAGGTTCAGATTAGTTTTGAGTTTGAGT GCTAGATTTTTTTCATTCATTATATACTGTATACTATATTACATGTTTTT CTTTATAAGCAAGCGTATGTCCCTTGGTTAGGCTCGTGTATGCTTAAGTT CTCAAAGCATTCAGGCATAGCTTATGCTTATTATATGCTTATGAATCATG CTTATGATTCACCTCGAGCCAAGTTTTTAGTGAAATTTCAGAAATTTTGT AAAAATTTGTTCAGATTTTGGGAGCAGTGGAATGTAGGAAACCAGAGGAA ACCGTGGAAAGTCTTTTTTTTACTTGACCTCTACCAAACCTTTTTAAACA GATAAAACAACTGGAAAAATATTTCAGGCTGACATGCTTATGTTATGTTT AGGAATTCTGCAAATCTGAGCCTTCATATGCTTAAAAACGTTATGCTCAT AAAAAAAACAACATGTATGTTGGTTATTATCATGAACATATAAAGTACTG GACCTCTAATTCCTTTGTATTTTTGTAATAAGTACTGCTAGTTCGTTGCC CTCTCTTAGAAACATAAAATGAACAATAAATTTGGATGATATAGCTCTTG GGAATACCTTGCTAACGACCTCAAAACTTGGACTAAAGTCTCTGTTGTTC TACTCTTCTCAAGTCTTTTATCTATATCATCCGACTAATATTTCTAAATT TTGACTCAAAAGTATGGAATAATTTCACATCAGTTTGGGGTTCAAATTAT AATATTCGTAAGACACAAGGCTCTCAACTTTGGCTTACTATATCTTCAAG TCATAAAAAAGTGATTCAAAAGTATACACACAGTTGAAATTCTGAATTTA GCGTTGAAAAATGTTTATAAAACTATGTTTAGCAAACTTATGAAAAAATT TCGTCAAATTTCACCGGCTCAATACTCGTAAAAAAATAAATTTGCCGGTC TCGAAAATCTATTCGCCTAATCTAACTTATTTTTATCCAGACATTCAATA AGTGAAGGAAATTTCCAAAAAACTGTCTCCCGCGCTTAAAACATTTAGAG AATTCCATATTCACCTGTTTCTGTTGCAATTCTGTCGCAACGAATGCAAC ATATTCTTTTATCATTAGCTGAGTTTTTCTCACTAGTTTTCAGTTTGCAT GAGCCCTAAGAAATCGACTGTTCCCCAATTTTCAAATCGCTTCAGGGCCG TTCATCAATAAATAATTTCCTTAAAACAACTCTTTTGCCGACTGATTTTT GTAGAAAAAAAACAATCAAAAACAAGGCCTTTTTTATCAAAATCAAAATT TTCTCTCGTCGGCCACTGTAAACATTTGATTTTTGCTTCTTTCTTTATTT CTACAGTTGGAAGACTAGGGAACTGGAGTCAAAAATTCTTTTTGTGGTAT CGTTTTCGAGAGGGAGATAGGAATTTAACTGTGGAAATAATTCCCCGGCC ACCAAAAGCGAATAAATTTGCCGTCCTCTATTTTTCTTTCACCAACCACT CTGAAAAAAAAACAAAACCACTGTAGAGAGCCATGTCAACTGAGTATCAA AAAACCTTGAAAAGTGCCAAGATCTTTGCCAAAAAACCTTGAAAAACCAC TTAAAATGCGTTGTTACTAAAAGTGGTAACGGTAGGTAACGATAGGTAAT GACAGAGCTAATGGTTCCGGTGATTTTGGGAGAACCTAACGACTCTGGTT AATCTATTCAAGAATTTTGGAAATCTGATGATTGTACAGCAGGATCTGAT CGTTCTGGTGAATATGACTGCGGAGATAATAAATCCAATCGTTTTTATTG TAAATTGGTGTTTGTGAATCGCCATCATCGCCTCATCGCCGAAAGTCAAT ACCCCTTGAATCGAAAATTATCGATGGATTTCTTATAAAGATGATGCTTA CAAAAAATGCACAATCCCTAACTTGCATTCACCTGCACAACAGTACCATT GGTGAGTGCAGCATTGCATTCACCAGTACATCATCATCGATTCCACCATT GAATTCACCAGAACCATTGATTCCCCATCATTGCATTGACCAGCACCATT GATTCCATCATTGTATTGACCAGCACCATTGATTCTATCATTGCATTGAC CAGCACCATTAATTCCATCATTGCATTGACCAGCACCGTTTATTCCATCA TTTCATTGACCAGCACCATTGATTCCATCATTGTATTGACCAGCACCATT GATTCCATCATTACATTGAACAGCACCATTTATTTCATCATTGCATTGAC CAACACCATTGATTCACCAAAGCCGTCAAATCTTTCAGTTTATTCACAAA CACCAATTTACAATAAAAACGATTGGATTTATTATCTCCAGAGTCATATT CACCAGAACGATCAGATCCTGCTGTACAATCATCAGATTTCCAAAATTCT TGAATAGATTAACCAGAGTCTTTAGGTTTTCCCAAAATCACCGGAACCAT TAGCTCTGGCGCAGAAACTTACAAATTTTGATAGTTCGACACCTCAGGGC CACCATTTTCAGCTTTTTCCCCATCGTTACTTCGTTACTTTTTCGTTACC CCTCGTTACTTGTGTTACTTCATCGTTACCAACTGTTACTTCATCGTTAC CTGTCATTACCTACCGTTACTTGTCGTTACCTATCGTTACCTACCGTTAC CACTTTTAGTAACAACGCTTAAATTGACTAAAAAAATCCGTAGACACCCT GCTTCGATTTATTGAGAATCAATCGAAGGATAAAATTTGGGGGAAACCAA TTTTCCAATTTTGAATAGGTGAGGGGGAAAGTGAAAATTTGAATAGTAAA GGGGGGAAAAAAAGAGGGGGGAAAACATCGATAGTTGGCAAATTTGGTGG GGGGAAGTGTGAAGTCACTTCGACTTTATCTCAGCAACCAAGGTCAGTCC ACATGATATCATGTGATTAGATCATGATTGAAACATTAACCAATTTTCGT TCTATTTTGTCTAGTATTCCTTTTGCAGCAAAATTTTACGTTTGTGTCAG GTTGAAATTTGAGAAATTTATATCGGTATATGGGGGGAACTGATATTTTC AGAATTTTCTGGGGGTGAGCAAAAAACCCTGGAGGACACTATGGTACTAA ATTTGGTCTTATTTGTTTGGATATTCGTAGTCTAAACTTAACTAATGAAC TCTTCAGATGACTGCAAAGTTGAAAATTGTTAGAAAAAAAAATATTTTTC AGAAATTTTGGTTGCTAGGCAACCTAGGCTGGTTGCTAGGAGCAAATATC ATTAACTTTCGATTATGTATTCTTCAGACTCTACATTTCATATGCTTTCA GAAAATATATAGTTTTACAGGTGTATATAAAACCATCAAAAAGTCATTCT TCATCGCATTCGTGTAGGTGTCAAAAAACCCTAAAATACCAAAATAATGT GCGGATCCAAAGGGTTAACAAGCAGTTCTTAAATCTACATAATAGGCTAG TACACTTCTTTTGACGTATAAATGGCCATGCCAAAGGCCCCCAGTTTTTA ACGCCAAACTTATGTCCTTTTTGGAGTTGGACATGCCATAAGTTACACGA GAACCATGGAGGTTTGGCCTAATAAAGGGGATTTTGAAAAATTTAGTGCA AGATGGCTGGAAAATGTACGTAAAGAAAATGAAGATTTTTTTGCAGAAAT ATAATGAAAATCTATATTATATCTGAAATTAATTATTAGTAGCTCTCGCC TTGCATGATGAGTACAATATATTCAAAGTACATATCTTTTTTCAATTTCA GCTTTTAAGGTATATGCGTATATTCGATCCAAATGCTGGATTTGTAATTG TTGGATGTCATAGATATTCATCTGAAAGCAACGGTGGAAAAGTTCTAAGC ACAAGAAAGTGGTATGGTTTTTAAATTTATCTATAAAATTGTAAACCTTT TCAATTTATGAAGCTATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011378TCONS_00011378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011378-proteinTCONS_00011378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:107762..113329 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.15 32.6 7.44 2.55 19.78 16.9 23.24 21.25 11.43 12.55 10.37 8.97 13.1 11.84 11.72 15.07 11.4 16.08 13.69 12.33 15.42 12.67 54.27 46.67 16.66 21.49 13.33 10.23 40.8 48.22