XLOC_006370 (gene) - C. hemisphaerica

Overview
NameXLOC_006370
Unique NameXLOC_006370
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:452238..454390+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006370 ID=XLOC_006370|Name=XLOC_006370|organism=Clytia hemisphaerica|type=gene|length=2153bp|location=Sequence derived from alignment at sc0000127:452238..454390+ (Clytia hemisphaerica)
TTTCAATTACGGTTTAAAGTAGCTTGGTTCGTTTAAACTTATACACTTTT
CAGATTTAATCAGATGCAAAAACTAGATTTCATTGCGATATAAAGAATTG
AAATACACAATGTCACTTGTAAAGGTATGTATGTGAATGATACTTAATTT
CCATATTCTCCCTTTTTTCTGacagatatttttcaaaaccttCAGGTCTT
TATCCACTGGAAAGATTCGTTTTCATTCTGATTGAGAAAACTCCGAAAGT
TTAACCCATTGTAATACTGTACTTAGCTGTCACACTCATCAGGAGAGGCT
GTGTGGTTGTAACTCgggaggggggtactaggtttgcgagttGACgggta
tgtccgagcaaaaaatcgaaaatcgataCCCTTAGAGAGGGGAAAAACTG
GCGTTTTTGGGACTCTTAGAGTTTCTCAAAATCTTTGCCGTTTTGTACTc
gatttttatccaatttttttaaaataacgACCCTTTCAGAGAGGAAATTt
agattttcgtgaattttggacCNCCCCCGGGATTGTAAGAAGAATCCCTA
CTTGACTTTTGAGATAAACATATACAGTGATCTCGCTAATTGGAACTAGA
ACGGAGAATTTTATAtgttcaaattacagagagatttgaattatGGAAAG
GAAtaagttcaaattatagaagaATTCGAGTGATAGGCAGCTCTAACCAG
GTCACAGAGGCAGGGGAGCTCTATGGAATGAATAAAGGAGATGTGAACTT
TGGTTGTGTTACTGCCAATGTCGAGTATTCAAATATGAATAtgtaaaaga
ttaataaaagtTAGTCTAATATACCCCTAGTTTTCAATCTGaatcataaa
atttcaaattattatcCTCAATATatgttttaattgcattttaaCTTTAT
AGCATCCATTACAACGACGCAGCTCTTCCAAACTCAGTGTTGCTAAAATC
GAGAGTGTATCATTATCACATGGTCATAAGAAAGATGATTCGAGTCTTTT
TCACGTCACCAACAGTTTATTACCGACGACGACCAAAATTAAGAAAATCC
GACGTCGTACGACAGAAGAGGATCTCGAAAATCACAGACACGAACATTTA
AAGAAAGGTTTATTAATGGTTCACAGTAATGAAAGTATCTTTTCTTCATC
TTCCTTACCTGATACAGATCCTCATGACTTGATGCGCGATTATCTTGGCC
GCCGACGTCGCTCGAACACCTTACCTGAACCAGTAGGTCCTGTTCTATTA
GCGCCCGTTTCGCTGTTGACCGCTCACCAAAAAACAAGAAGTCATGAATT
TTCGACCACGTCATCAGCAGCAGTTGACGTAATATCACGTAAAGAATTTT
CATCTTCgacagaaaaaatcaaacccATAAGTTTAAACATCGAACGTAAA
TCTAAGAGTGTGAAAAAACTACGCGAGTTAGTTGGAAAAGTGTTACGTAA
AAATTTAGAACATTGTCGATATGATGCTAAAAAGTCGCGCAAAAGGTGTA
CACATTTGAGTCAGATATTAGAAACGACACTGAAATCAAGTTTAAATTCT
GGTGAGTTTGAATATAAAGTCGTGGCTTTGGTTTATATCGGGGAATTTCG
GGATGACGGTATGAAGCAGTcgtgtcaatatttttgtaatcCGGTATCCG
ATTTATGTGTGATGGAGCACTATCGGGGTGAAGATATGTTTGCGACAGGG
ATTGTCTTCGCGACGTTAGTGGAAAGTCAAAAACAATACTTGGTACCTTC
TTATAATAACCTGCAATCGTCGAGACGAGACCCTGTAATGGTTTAGCTTG
GTGATTGGATATCAAAAGAGGCAAACTTCAAACAGGTCATATATCAGGAA
TTTGTTCAGACGTGTTTAAGTAAAAGGAGGGAGGACACAATTTTGCAAAA
GACGTTGTATAAAAACCTTACTTAAGGGAGCTAATTTTGAGGAGAACCAT
TTTTTGACGAAATTTGCCAAAACTTTTGGCAAATCTATTGTGaatgtttt
tagatttcgaaATTTCCTAATACATGTTTCTGctcctatatcaggctcgc
attatgcttagcattctattgcaTTTTAAATTATGACCAATAGActaatt
cttttcaaattttggaggtattttcttgtttttattatagtttctaaact
ttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011361TCONS_00011361Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011361-proteinTCONS_00011361-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:452238..454390 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3	0.15	0.28	0.07	0.95	0.84	0.55	0.4	0.13	0.25	0.03	0.16	4.21	3.17	0.43	0.57	0.18	0.33	7.96	6.16	0.74	0.56	0.24	0.22	0.26	0.12	0.38	0.18	0.2	0.38