XLOC_006367 (gene) - C. hemisphaerica

Overview
NameXLOC_006367
Unique NameXLOC_006367
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:380379..383750+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006367 ID=XLOC_006367|Name=XLOC_006367|organism=Clytia hemisphaerica|type=gene|length=3372bp|location=Sequence derived from alignment at sc0000127:380379..383750+ (Clytia hemisphaerica)
CAGGCGTTTCTACAACCTGCATGGAAACTAACTTTCAAACTACAAAGATG AAATACTGATCAGAGTGGTAGCTGATTTGTGCAATGCATATCGTAGGTAG TCTATACACTGCACTAACAGTCTAACAGTCAAACAGTCTTTAGCCCTTTA CTATCATACCATGTTCATTAAAAAGTGCTTTTCataaaatacttttttgt ggtCATGGTAATATAATGGAGATTGTCTTTTGTGATTTATGATAATGACA TAGAGAGGAAGTTAAAATGAGCTAGAGAACTGTAATTTGATGTGAAACtg cagagagagagagagagagctgTGTATATCTGTATGGAGAATGTTTTTGA TGAAACATGATGGTTTTCTCTATAAAAATAGCGTTGTAATATGTTCTGTC GTTTTATAAGATAATTACAAGAGCAGTTTGCAGTTTGTTACTacattttt caagcttttttaTTGGAGAAATTTCACCATACCAGTTATGATTTTGTGTA ATAAGACAATAATGGGAAGAAGGGGGTTGAACTGAGTCTTCTAAATGTTT TTATCCAAAGAAAGTCCGCCATATTACATAGGGTCACTTATTAGCGCCAT CCACTCTGTCAAAAAGCCATAAATGGCCACTGGGCTTCCCTCATGCTCGA ATTATTAAAGTTTGACGTTTTACTAAGGACTGGACTACTATGGACGGAGC CTTTGGGTTGAACTTCATGAACTAAAGACAAGTTCATGAGATAATTTAAT AACTTCTTAAGGACTTAAAATCTTTCAGAAACCATTAAACCATCCTACAC ATTATACAATTCTCTTTATTAACAGTGTAAATACAATCACAAGATGCTAG CAGCACCAGCACGCTGTATCCCATCCGTCACATTGAGATCGTTCATTCTC CATTCCATCATCTTTGCATGGTGCTCGTTCGGTATTTACAAAGACCAAAC TGTTTACATTATACCAAAATTCAAAGAATATGGTGGTCGTGCCCAGTTTT TGACCATGATTACTGCCTACGTATGTCTGGTTGCCTATGGTATTGCTTTC GTGGTTGATTTGATTCAAATGGTGACCGGATTGCTGGAGGATAAAAAAAT TACCACAAATGGTTATGAAGAGCATCGATCCATTCTCATATCTTTACGAG ACGATTTGGTATCATTTTGGGCGTTCACTTTATCTGTTTTTGTCGTTCTT ATGTATTGGTCACTATGCTATATTGATCTGGATGGCGTCCACCCACTTGA GAGCCGTAAAATCACGCCCTTGTTTGGGTGGTATAACCAGTATCTACATA CCGTCCCAATTTTCAACGCCTTTTTATTGATTACCAACGTCAATTATGGT TATGGTGGaatcaaaaaagtcattttcaatATTATTCTTCTCGGTTCCGG CTATTTCTTTTGGATCTCACATTTAGCGCAAGTGAAAGGTTACTGGGTGT ATGGTTTCATGGATAAATTGAATAAAGTTCAATTTGGGGCGTTCGTTGTG GCGTGTCATTTGATCTTTTTTCTTGTGTATGCTATCGGACGAAAAGTGTC TACTTCGTGTTGGAGTCAAGAATATAAAGAAAGAGTTATCATCGAAAATG AACGCAAAGGATTGTAggaatttttaaagttttttttcaaatatcgaaTT TAAATTTTCACGGATCATAGTATTTgcttcaaatttaatttatgaCGAGT GGACTCTTTCATAAACCTCTGTGACAAATTAAAGATGAGATTTAAAATGG AAGAGTACATTGCATATGCAAATAAGTATACTTTAAAGTTTTAtattctt aaaggttttgttttcacataagtgtttccgtttcatatcagacacatgtt tcatatcaggacagtgtctcctTATTgttttgttatattgtgctgacata agcaaaaaatgtctttcttttcctctttctgaccaatcttgctccacatc cgtacaagttcaatatcaaaaagcttgtaaattaaaattgatgagtaagc aaacggtatcactcttatttaaaaacaaaacctttaaaggggGGTAGATA GCCATCTAAACTGTGAATTTGAAAGTATAAAATTAAAGTAGATTtacttt aaaaatttctttaataaaaCCCTAATAACAACATAATTCCATACAAGTca tctaaagtctgtctcaaaataatctgCAGGGgagacaaaatagataaaat ccgAATTAAATAGCGCTTTCGTGCTTGTTGAAACGATAttcaggagtgga atattatcaaaaaattaagatgaaacaaagatgaaaaaaaaacgaagtaa aaacttctttaaaaaattcttaattaaAACCATCTCAAATGATAGAATTT AGAACGTCGTCACtgcgaagaaaaatatattcaacCGAAATCGActttaa aaatcataaaaaaaaaacaagaaacagAGCCCATTTTATAGTCAACTGGA CAAAAGTTTTAAGCTGcatttttgactgaataaatatttttcgaaattct tttcacagtgatgacattctaagattgaaaattttttcatgagAATGGTC ATCATTTTTACAATTCcccaaaaaactgatttttttattcatttctttTC GTCtttattttaagtatttttttcaaatccttcccatttgataatatttc actcctttaaaggtttatttttacataagtgctcccatttcatatcagac acatatttcatatcagggcagtgtcttgctattgttatagtatgctgata taagcaaaataaatgtttttctttccctctttctgtccaatcttgctcca catccgtgtgtcaatccaatgttaaaaagcttgtaaattaaaaatgatga gtaagcaaacgatatcactcttatttaaaaacaaatcctTTAATTCAACA AGCACGAAAGCAATTCGAATTATCAAACGTTACAACATCTTTATCCTTCA CGCAGATAATAGTGTTTTCCTATGTTACATATTAAAACTGATGGTTTTCG TCGTAGAGTCATCCATCACAATCTTTTGaaatgtattttttaaattgtac tctatacagcacctgaccccgagaatgtagtaaaccccgagaatgtaggt ttctcattttttagcattgtagccctaacgatagttcaacttcataaaaa tttgtttcagaGCACACTGTTACATGTTACTGATTATTTCTGgacagaaa attttaacttgaattaattttttccaacgaaaatctgaatggaagttgat tggatattaCCCGAactgagacattttttaaataaatcctctctaaatcg aaatctattggaataaagttatgatgatagggtattttcttagtcctaat gaactaaggaaatggggaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011357TCONS_00011357Clytia hemisphaericatranscript
TCONS_00011358TCONS_00011358Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011358-proteinTCONS_00011358-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:380379..383750 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AIG1PREDICTED: androgen-induced gene 1 protein isoform X2 Homo Sapiens
ADTRPPREDICTED: androgen-dependent TFPI-regulating protein isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.25 5.46 2.57 2.38 4.24 3.28 16.25 15.34 11.53 12.86 8.23 9.99 11.69 16.16 12.2 10.81 7.48 10.75 10.19 7.44 11.93 10.19 6.51 6.95 15.53 9.76 7.19 6.81 11.39 10.65