XLOC_006327 (gene) - C. hemisphaerica

Overview
NameXLOC_006327
Unique NameXLOC_006327
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000124:556136..564404+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006327 ID=XLOC_006327|Name=XLOC_006327|organism=Clytia hemisphaerica|type=gene|length=8269bp|location=Sequence derived from alignment at sc0000124:556136..564404+ (Clytia hemisphaerica)
ctcttttagatgaacaaaaactaaaatacagataaaaaatatcaaagaaa
aaatgatAAAGTTGCTTTTGCTTCTGGCTTTCTGCAGTTCTATTAAAGGC
CAGGAAGGTGGAACAGGATCAAACAGTGATGGTaagattgcttaaaaatt
ctGAACTTATCATTCACCCTATTAGCGCACCGTATGAATCTATAAatatt
actctcgatgtgtttgtacgagttctaCTCCCATCAACTTTTGCATTAAT
TTCTTTTGCACattaattgcatcatttgaccaaagatatataacaacttg
catgtatatctttaattgagctacattgaattgtgggattgcaactcgta
caaatgtcaaaaaagttaaaagcaaTAATTATGACATATGCGCAAATTTC
CTTTATAATATGTTTATGCAATTTCTGACTCCTTAAGAAGTTGTTCTAAA
CTGGAAAAGTTCAATGAGTTTGCTTAAATACATGGTGAACTTATTgctta
ccttattggaactaattttcgcgggaactaattttcgcggtcgaaaaaaa
atatccaaaaaattgcatttcgcgggttttaattttcgcagtttttttca
ttctggaattttcgcgggttttaattttcgcggtttcgcccttttttgga
caaatatctttcattttcccagggatttttcaaatttttcgataaaattg
gaaaaaattatgttttgcaggaattaatttttgcggtttttaactctcaa
aattttttgcgggttcaaattttcgcaattttgacgaaaaaccgcgaaaa
acgcgaaaattagttcccgcgaaaattagttccaataaggtactttgatt
tcaaaagaggagtagtttcaattttctttaaattcaataaCGTTTTTATC
ACAATAATAGATTTATCCTATTCTCACTTCTATCATGTTCCATATTCAAT
TTTAGATGAGGTTCCACCCAAAGTGCATCAATTGCTACAATTGACGGTAC
CAATTGAACTTACGAGTCAAGCACAAGCTGTTGGCGAAGAAGCATTGGTG
TTAGAATGTATTGCATCTGGAAACCCTGCCCCAAACATAATCTGGCAATT
TAACAAGATAACATTGAATCCAAATGGCCCTGATTTTGATGCTGCAAAAT
ATAGAGTAGCAGGTAATAGTCAACATATTAAGCATAttaaagatttttgt
tttgtttttatgtttgttTTCTTCCCTTCTTTAGAGGTGCCACAAAAATA
TTTACATAGTACTAGTTAAAACAAACatgacaaaaattctaaaacatTAT
TAAGAATTAGACAGAATTTACACAAgcaatatattttaattttgatgatt
ttgttcTTGAAACCCTCTAGGAAGTCAATAGTTTTAAAGTATTAGGGTAT
TCAAGCTTGTCCAGCTCAGAAATTAAAGAAGttgatcagacccctttccc
cACTATGTTATTCATATGTATATTTCTGTTATTTTCTCTCATCATTTCAG
GAAACCGCCTTGAAGTCATCAAACCTCAGGGTCAACTAGGTAGCAACATG
CGTGACAGTGGGCCATATAGGTGTCTGGCAGAAAATAAATTTGGAACAGT
gtttcttgaaaaagaaatcaagattCGTGTGTTAGGTTCCTTTACGGCTC
AAAACCAAGAGACAAAAGCTGCATCAAAGTTAAAACCAACGGTTAACAAA
AATTTTAGAATTGATTGTCCACCGCACGAGCGCAAAGACGGGTATGGTCT
CTCATATCAATGGGGTTATATCCCAAAGGGTCAAGACACACCTCAATACT
GGCGACCTGGAAACCCAAATCCGCGTGTCTTTATCAACTACGAAACTGGT
AGCTTGCATTACAGTTTTGTTGACAAAGATGACATCAAAGAATCACGGGA
TATTGGAGGTTTACGTTGTATCTTGGTAAATCATCGATCAAGAATTATGT
CCAACCAGCAACTGTTCTGGAACGCATATGAAAGTAAGCTTTACTCTTCA
TTCGTACTGAAAGTGAATTTGAGAAGTTTCAAGGAGCACTCTCAAGGGTC
tctaaattaaatattttttgtgccTTCAAATTTtgtaattcaaataaaaa
aagattaatttAACTTAATTGATCTGTCACATTCAATTTGCTCTAGTATT
TCTTGCGACTGCAGTTGGAATGGAGATGACCAAAAGGTTCCATCTTAGAT
AACCATCTTCCCATATTCCTCAATTGCTCCAATTACACTTGGTCCTTCTC
TTTAAATTATAATACAAAGCATCAAATATAAGCATCGATTTGATATCTTT
GGTACGACCCAGTCATGGATTGAACCCAAGACTGAATGGTTAACCAGTTC
ACTGAGGTTGCCATAGTTACTCTGCAGAACCgtggtgcagtggtagagca
tccggctatggttggcaaggttgtgggttcaacccctaGCCGGGtctacc
aaagattctcaaaatggtacttgatgcctctctgcttgatgcttgGCAAT
TAAGAGATGGATCAAGGGTTGTGAGTTGAGAAATACAGGAGGAAAGAGTG
GCGCCttcccctacctttgggtagatagtTATTAAAAGAAGAGCCTTTGA
ATCACCTCCAACTTCGGTCccatacttacttacttatagtTACACTACTT
ATATGTTGGCCCCTGTTAATTAATTTAAAGTATTATCCCTACTTTTTCAG
CGTTAGTAGGATACGAAGAAAAACCAAATTTTGTGGTTAACATGCCAGCC
AAAATGACGGCCCCTGTTGATTCTGCTTTCTCCATGTTTTGTGGTGCTCA
AGGAAAGTAAGTAAATTATAAAGTTTCTCCAAATTATAATCCCATACTTT
TTAGAGAGTAAGAATCATGCCAACTTTATTAGGAGTTTTAACTATGCCAT
CTTCAGTATAGTTCccttcttctttgtttttagtTGGCtggtaaaagaaa
aataattaggtTCTTAGGCCGGCAAATTCTTAGCAGGCCCAGTGTGCATT
GATTAAAATTATTATATGCACTTGGTGTGGAGTACCGAATATATAGACCG
taatgtaatttttttgttttttgaaccAGCAAAATTCGTCTTTCGCCAGG
GCAAAATAAGATAAGATATCNTTTTTTGTTCTTTGAACCAGCAAAATTTG
TCGTTCGCTAGGGCAAAATAAGATAAGATGTTTGTTTCAATATATTGTAT
TTGTGACTATCATAATGAAATTCTTATGCTTTCACTAACAACAGCCCAAA
CCCTTCATTCACTTGGACGTACCAGGGTATtgaaatcaaatcaagaacCC
CTGGATCAGatgaattgaattttgaattcttCCGGTTCCGTGGTATTATG
AGACAAGAGCTGTACATCACAAGAATCACAGAGTATTCTGGTGGTACGTT
CCGGTGCACAGCTTACAATTCTTTCGGTGGCGGTGCTTCCTTCAAGGAAG
GTCAATTGACTGTATATTGTAAGTATATGATCATGTCTCCCCATTTTTTT
AAGGACCTGTAACTATTTGTCTGTTTCTTGGTGAGCTATAAACTACTTAC
AGTTttagaaaatttagattttgtcaaaagttatcaTGCCAAACCTTtgt
tatttttggacctaccttggaggtcctataaattaaccgatgtccgttcg
tctgttcgttcgttcgtccgtccgtctgttaccagcttttctcaagattg
gctcattagttttttctgatttttggcacaatgatgcaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaaaaaccgtttttttggcattttctcgagatttc
atcattagttttttcagattttttgcacaaagatgcgtattagcaatgcc
caaaacatggaagagtccaatttttgagaaaaattcttttccggcctaaa
atgccggaaatatgccggaaatcgccgtttttgcagattttcatcggact
ttttccttataattggttgttttttcattcaaaaacattNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTTCtttaaacgc
tatattttttgactgatttttttctcctcgcattgctatccaactttcat
catcaggtaggtccattcagcatctagcttgttctagttattgttatttt
tttggctCTGGAATTGGAGAGCGGGTTTTGAGCTGCCCAATATTAAAAGA
AACACTAAGGTTTGGGAGTTGTTTTCTGCCCTAAATTTaggggggggtct
tcaaattctCAGACAACCCTGCAAGGGGGGGGTGAAAAAGCCTCAATTAA
TAGATGATTGGCCTTTAGGGGGGATTGATTGTATAGGAGGGGGTTTGAAC
CACCCAGGAAACTATTGGCCNCCAATATTAAAAGAAGCACTTAGGTTTAG
GAGTTGTTTTCTGCCCTAAATTtaggggggtcttcaaattctCAGACAAC
CCTGCaagggggggggttgaaaaaaGCCTCAATTAATAGGTGATTGGCCT
TTAGGGGGGATTGATTATATAGGAGGGGGTTTGAACCACCCAGGAAATTA
TTGGCCTGATCTGAGATAAcacatttcttttcatttttttctatttgaac
TCTTCTTTTCTTCTCAGTCCCACCGAAATTTTTGAAGAGTTTCCCAGATG
TGATCGACTTGCCCATTGGAAATCCGTTGGAAATCAAATGCCAAGCTTCT
GGAACACCCACACCCAAATTCTATTGGTATCAAAACGGAGCACCTCTTGA
GAATGAGTATGttgagtttaatattttttatttgaatctgtACTACCAGT
AAATACACAAATAAATTGAATTCATCATTATTCAATAAAGGGAGAAAATT
ATTCGAGTCCCATTTTGAAGATTGATTATACAAATCGTTTTTGAAGCTTA
ATAAAATGGAAGATCAGTTCCCTGTCATATTTTGCATGAGAACCAAAGGG
CCAGCTTTTAATTTTTACCAAATTCGCTTACTGACTTTATCCAAAATAGC
TGCATTTTAAGGTGAACCCACTTCTCccgttattttcaaaaaaggaaaaa
actctCCCTGATTCTTACTTGTGTCTTTTTTCCTtgcttattcatgatat
gcaccattgcaatgtcttctaacattacatcgCGGACCtgccaacagctg
attggttacaagtgacgtattgacttattttacgtcacttaaactaatca
gctgttgggtcaaTGGTGTAACGTTGAAGACattccagtggtgcatatca
tgaattgatttTGGGATATAACATGACGATGGCTATTATAATTTTCAGTC
CAACCAAGCCCAGAAAGAAGATCACAGGAAGTGAGGATGATGCCACGGAA
GGTTCTCTCGTCATTACGGCCGCCGAAGCCAAAGAAGACGATGGAATCTA
CATCTGTGTTGCCAAGAATGACCTCAACACCATCACGCAATCCGTCTACA
TCAGAGTTAAAGGTATATAAACGAACGAATGGCGTGGCGGTCATTTTTGT
AGCCTCTGTCAGATTGATACGGACTTTCATCAATACTCTGTCTCTGTATA
TCTGTGTATCTCTGTCTCTACCCTGCCTCGTATAAAGTACACGAAGTACT
GTTCCGTCACTTCAAACATATATGTCTATATGTCGTGCTTTGACTGAAAA
TTGTgtcgtggttaggtaggaaatcctgcCTAGGTCTCGCgacattacaa
taaaatttcagcgcttgaccaatcagaagcttcgcgggttttcgaaaaca
atagcaacaatattttttccgatattcatttttttcgcctgcgatgactt
aaagcacgacatcaaGCCCTTCAAGCTTTTGTCTCTTACTTGTTACATAA
TATTCCCCTAGAGATCATGGGCGATATGGATATCACTTTTTATATTGAAG
TCAAGACATTACAAAGTCAGCAAGACCTATAAAACTTAACAGAGCAACAA
TGACAAAGTTTAGCTAGCATAGGCAAAATTTCGGCGGTATCGTCCTTTAA
ATTTTCGTAAGATGAATTTCTCTACAGTCTGTACACTAGTAGCTTTTAAT
CCTGGCCAACCAAAACctatttttttggaaagtgaCACCCGAATGGTTCG
TCCACTCGATGTAGGTCAAGACATTTCAAACGGAAAATAACATTAACATA
ACAATTTTATTAAATGGTAATGTgttgttccattaaatttccatacaggg
ggtggccgaacctttttaaggcaaataaaGATTCTTAGAAATGCATGAAA
AAAACCCCTGGAAAGacgcaaaatttgcaaaagaaccctcggaaaaattc
ttttcataccttgaGACAAACTAAAATCAGCCttctaccccctggaaatt
ttagaataactttttaccccctgtaAAAATGAAAACCAACTCCTTTATAC
CctctggaaattcttctcctaTAACCCCTTGGAAATGTTCTTCCACCCcc
tataaaatggaatggcccaatgtagCATTAGAAAACAAGGAAAAAGTTTA
CAAACCTTAAAACTGCATGACATTATACATCACATCTTTTCTCCAACACA
GTGAATGTTACCAACTGATTGCATATATTTTTACTTCGCCCAGTTTTTGT
AAGAGTGAAGACAATACAGGGTTATCTAAGCCTATGGATCTAAATGTGGT
TTATAAAAATTGACGAATTTATCTGACGATCTTATAGAATCCCTTTGCAT
GTTTTATTGTTTCTTAAGATTCCTTTAAAACCACTAATTCAAAGAAGGTT
CGATCACTCATacctagtctacacaatagacagctcaaGGCTTTCAGGCC
TTACTCTTACGAAGAGTAAGGAGTTTtgcgctcgaaacgaaggaagatat
gacgtagccttcTCAGACCATATTCGCAAGTAACCTTTCCATTTTGCTCC
GAAACGAATATTGAAGCCATTCTTTTGGTTATCAGTGCAATATTCCAACA
TTATTTGGAGATTGCttacagaaaaaaaactttctttttataatagtacc
tgttatttacttcgtacattacggtccgaaaacgatattgtcaaatattg
ttcgtcaagatattgtgtagtctaagtagcccttagaACTTAACtgttga
aaaaattcaaattttttacaagtcGTGGGTCGTAAAATGTCGTAAAATTA
TAACAAagaattgaaacaaaagaaacaagaaaatgTTATTCTCAATGGTC
CGTTAGTCTTTTgacttgtaattttttaacatgaattttttaacaaatta
atTTTCATATATATAGAGGAAGCGCCACGTTTCGACGTTCCCTTGGACGA
CCCCATCTACTTGTTCAAGAACACGAAAATGCAGATCGCCTGTAAACCGT
CCGGAGGTCCGATCCCCACCAAGAAGTGGCAGAAAGACGGACAAGATCTC
GATACGTCCGGATCTGGTCGACACAAATtactcaaggtttatttttacaT
TCTTCATTTTTAGGGCGATTCTTAATTTCTTTGCCAGCATCCTCATACAA
GCCTTGACATATGGTAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011284TCONS_00011284Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011284-proteinTCONS_00011284-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000124supercontigsc0000124:556136..564404 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.42	22.47	80.71	85.89	399.33	306.67	167.71	191.93	103	156.14	96.53	86.96	95.39	91.42	64.34	78.44	82.81	81.55	65.08	89.63	81.11	84.67	29.06	43.75	75.65	77.88	81.97	68.14	60.25	60.96