TCONS_00011284-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011284-protein
Unique NameTCONS_00011284-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length532

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011284-protein ID=TCONS_00011284-protein|Name=TCONS_00011284-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MIKLLLLLAFCSSIKGQEGGTGSNSDDEVPPKVHQLLQLTVPIELTSQAQ
AVGEEALVLECIASGNPAPNIIWQFNKITLNPNGPDFDAAKYRVAGNRLE
VIKPQGQLGSNMRDSGPYRCLAENKFGTVFLEKEIKIRVLGSFTAQNQET
KAASKLKPTVNKNFRIDCPPHERKDGYGLSYQWGYIPKGQDTPQYWRPGN
PNPRVFINYETGSLHYSFVDKDDIKESRDIGGLRCILVNHRSRIMSNQQL
FWNAYETLVGYEEKPNFVVNMPAKMTAPVDSAFSMFCGAQGNPNPSFTWT
YQGIEIKSRTPGSDELNFEFFRFRGIMRQELYITRITEYSGGTFRCTAYN
SFGGGASFKEGQLTVYFPPKFLKSFPDVIDLPIGNPLEIKCQASGTPTPK
FYWYQNGAPLENDPTKPRKKITGSEDDATEGSLVITAAEAKEDDGIYICV
AKNDLNTITQSVYIRVKEEAPRFDVPLDDPIYLFKNTKMQIACKPSGGPI
PTKKWQKDGQDLDTSGSGRHKLLKVYFYILHF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006327XLOC_006327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011284TCONS_00011284Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 52..127
e-value: 3.7E-5
score: 33.1
coord: 278..353
e-value: 4.4E-4
score: 29.6
coord: 382..456
e-value: 9.8E-12
score: 55.0
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 272..366
e-value: 7.1E-5
score: 32.2
coord: 46..140
e-value: 11.0
score: 11.0
coord: 376..467
e-value: 8.7E-7
score: 38.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 362..467
e-value: 9.9E-20
score: 70.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 259..361
e-value: 4.3E-13
score: 48.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 468..526
e-value: 1.5E-5
score: 24.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 42..162
e-value: 5.6E-11
score: 41.9
NoneNo IPR availablePFAMPF13927Ig_3coord: 368..453
e-value: 1.5E-13
score: 51.0
coord: 50..124
e-value: 2.9E-7
score: 30.9
NoneNo IPR availableCDDcd00096Igcoord: 387..463
e-value: 5.52988E-13
score: 63.6623
NoneNo IPR availableCDDcd00096Igcoord: 287..353
e-value: 4.8754E-8
score: 49.4099
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 270..353
e-value: 1.9E-8
score: 34.1
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 31..136
score: 10.245
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 265..364
score: 10.517
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 369..465
score: 13.421
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 442..518
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 362..467
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 49..138
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 268..372

Blast
[Close]
BLAST of TCONS_00011284-protein vs. Swiss-Prot (Human)
Match: CNTN5 (Contactin-5 OS=Homo sapiens GN=CNTN5 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 8.969e-37
Identity = 128/458 (27.95%), Postives = 207/458 (45.20%), Query Frame = 0 
Query:   54 EEALVLECIASGNPAPNIIWQFNKITLNPNGPDFDAAKYRVAGNRLEVIKPQGQLGSNMRDSGPYRCLAENKFGTVF-LEKEIKIRVLGSFTAQNQETKAASKLKPTVNKNFRIDCPPHERKDGYGLSYQWGYIPKGQDTPQYWRPGNPNPRVFINYETGSLHYSFVDKDDIKESRDIGGLRCILVNH--RSRIMSNQQLFWNAYETLVGYEEKPNFVVNMPAKMTAPVDSAFSMFCGAQGNPNPSFTWTYQGIEIKSRTPGSDELNFEFFRFRGIMRQELYITRITEYSGGTFRCTAYNSFGGGASFKEGQLTVYFPPKFLKSFPDVIDLPIGNPLEIKCQASGTPTPKFYWYQNGAPLENDPTKPRKKITGSEDDATEGSLVITAAEAKEDDGIYICVAKNDLNTITQSVYIRVKEEAPRFDV-PLDDPIYLFKNTKMQIACKPSGGPIPTKKWQK 507
            E+ + L C   GNP P+  W  N   ++    D+   +Y +      +  P     S  +DSG Y+CLA N  G++   E  ++   LG+F+ +   T++A  ++           PPH  +    + Y W +     + P +      + R FI+ ETG+L+ S V      ++ D+G   C++ N    +R++S         + ++G E +P   V+ P  +TA   +   M C A GNP P+ TW      I S+            R R   +  L I  +     G + C A NS G   SF+ GQL VY  P +++   D   L  G+PL  +C+A+G P P + W +NG PL      P+ ++     +   G L+I     + D G+Y C+A+N    I  S  +++   AP F +  L   I + K+ ++ I CKP G P PT  W+K
Sbjct:  116 EKKVALNCEVRGNPVPSYRWLRNGTEIDLES-DY---RYSLIDGTFIISNP-----SEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGR---TRSAVSVREGQGVVLMCSPPPHSPE----IIYSWVF----NEFPSF---VAEDSRRFISQETGNLYISKV------QTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMG-EYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNGYIPSKA-----------RLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKN-SFR-GQLQVYTYPHWVEKLNDT-QLDSGSPLRWECKATGKPRPTYRWLKNGVPL-----SPQSRV-----EMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKK 517
The following BLAST results are available for this feature:
BLAST of TCONS_00011284-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTN58.969e-3727.95Contactin-5 OS=Homo sapiens GN=CNTN5 PE=1 SV=2[more]
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