XLOC_006326 (gene) - C. hemisphaerica

Overview
NameXLOC_006326
Unique NameXLOC_006326
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000124:535840..539288+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006326 ID=XLOC_006326|Name=XLOC_006326|organism=Clytia hemisphaerica|type=gene|length=3449bp|location=Sequence derived from alignment at sc0000124:535840..539288+ (Clytia hemisphaerica)
ATGCTGGGTCGGTTACTACTGTATGTTGACTTACATTCATAAAATTATGT
GTCCCCTTACCAACAAGCACCTACtgtatattttcatatttttatatttt
tcagagATTACTAATAtacaaattatcaaaaaaaaaaatacaatacatat
TTGGAACTTATATATACGTAAATGGTTATCACCCTTACAATGGCGTAATC
AAACTTATTGATGACTTAACATTACGTAATTGGAACTACGTATGGAACAT
AACAGTCTAACGGGTATCGCGTGCGCCCGCCCGATCATTTATGCTGAGGG
GTTGTTCGCCCCTTGCACTCTTGAAGATGGGAAATTTATACCTGAAGAAG
GGCTGAGTCAGCAAGATCTATGTAGTATCTTAAATGGAGAGCTTTTCAAA
TCAGGATCTGACTTGGTTGATGATTTTGCTgtaagtttgatttttctttt
tttcgttcAATTACCACCGTTAGTCCTTTACTGATCTCTTaagtagtaag
tctgcgaccgcagtcggaggcgacccgaagtctcctctttcgatagctgt
ctacccgaatgtaggggagggcaccactTATTcgccctggatttctccac
ttacccttgatccttctcttaattgctaagcaccaagcagagaggcatca
agtaccattttgagaatctttggtatgacccggctgggggttgaaccgtA
GCctgatgctctaccactgcaccacGGCTCAATAATCTCGAAAATATCAT
CAGCAATCTGTATTTTGTTGAATAAAAGCTTTGACCCATTTTTAAGCTAC
GGTCTTTTGTAGAAATCAATTACTGtttgatttaattatttttgttgttt
aatGACAGGAAGGGAATTGAGGTTTTAGATCTGGGTAGACTTCCTTTAAA
GTGGTGTCGTAACTAAAGGCCATTCGCTTTAAGTATCCCACTCTTCATTG
CTACCATATGCTGAAATCACGATCAAAAGAAAATCAGGCTCATTACGCTT
ACATGTTTTAAGTTAAGAACAGTCTTTAACTCGCTTTATGTTTTGGGTTA
AAACATTCAGGGGTCCCTAAAGGCCGGTCTCCACTTGTGCGCGCTGTGAT
TGCACCTTTTGGCCTCAATCCTTTTTGCTTGGAAAAAAGATTACGTCATA
AAAATGTAGCGCGCGCTCGGTACGATCGAAGCGCGCGCAAGTTGAGACCG
GCCTTAAGATGTACGGATGTACTAAACTGCAGTTTTTCACATGGTAGCTA
AGAACAGTCTTTAACTCGCTTTATGTATGTGGTTAAAACATTCAGAGGTc
cctaaaggccggtctccacttgtgcGCGCTGTGATTGCACCTTTTGGcct
caatcctttttgcttggaaaaaagattacgtcataaaaatgtagcgcgcg
ctcggtacgatcgaagcgcgcgcaagttgagaccggccttaagatgTACG
GATGTACTAAACTGCAGTTTTTCACATGGTAGCTAAGAACAGTCTTTAAC
TCGCTTTATGTATGTGGTTAAAACATTCAGGGGTccctaaaggccggtct
ccacttgtgcGCGCTGTGATTGCACCTTTTGGCCTCAAtccttttagctt
ggaaaaaagattacgtcataaaaatgtagcgcgcgctcggtacgatcgaa
gcgcgcgcaagttgagaccggccttaagatgTATGGATGTACTAAACTGC
AAAAAATAAGCCGGCCAGTTGGAAACcactttcaaagaattcttcaGAAA
TCGGTCTGATAAGGCAATCTAACTCTTGTACGTTTTTATTGGAACGAGTT
ATGACAAAGTTTTGACTGAAATCTTCATTGATGTGTATCCAGTCTATTTA
AATCAAGGTCTTTTTTATTGTCCCATGCTGACCCTCTGATGCAAAAACTG
AATTATTATAtgaagttcttttttttttttatctacagCTCAAAATGAAG
TTGGAGAAACTCGCCAAAAAGGACGAAACGAATTTCGAATTGGATTACTT
CCCCGAAGATAACATCAAATTACCCAACTACACTTCTAATATTACGGACA
GCATAACAAAAAGCACGGAAAAAGAACGTGAAGAAATACTGAAAGACGGT
ATCCCGTTAGTACGGATACGACAGAACAGTAGCGGGAACGCCCCGGGCGG
CTCGACGAGTTCAGTAGATATTTTAAGGACGCCCTCGTTCGATTCTGAAG
AATTgagagatttttttgaaaagcaaATCACGTGGTTattggaagaagaa
gaaggagaagactTTGTTGTCATGGAAACTTGCTCCCGTTTCCGAGACGC
CCTTGTGTTACTGGACATATTAAAGCAACATAATTTACCATGTGTGCTTA
GTTTCTTGGCTAGGCGAGACGAACCAGTCGCCATATCATTTAGTAAGATA
CAAATTGGTCTCGATAGCCTGATGTTTTGCTTGTTTCAAGCCTGAGTAAA
GATTTGATTGAATGAGGCATGGAGATGAATAATGTTTGACAGTTTTAATG
TCAAAGTTTTGGCCAAGGATATCATAAATAATTCAGTAGTGAGACTAGTA
CGGGCGAATATCTCAACTTTTGTTCTGATTTTTAATTCAGACCATCGATA
GATTGAGATAAATATTCGAACAATAAGCGAGAATAAGGCAGCATGGTTCT
ACTTCGCtgttgacaaatcaaaaggtCCAACCTCAAGATTATTGCCTGAG
AAAActaagaatttttctgtttgtctaaacacaaattttgagattgaccc
tGTTTCATGTAGAAAGGACCCTCCTCACTATTCAAAATAGGCCAATCTCA
AATTTTAGGCTAGCTAGACAGAAAAACTCCTAGCTTTCCCAGACACTAAT
TTTGTGATTGacccttttgattggtcaacAGCAATTTGAGACCTGAAATC
TTTCTCTCAGGCATCCTAAAGGTTTTCCGCTTCAAAACCTTCTGCTGGGT
TGGTTGGTATATACTTAGATTTCACGTTGGAAATCGATCTTTACTAGACC
TCTCTTATATCGATATTGAATTATATATCTCAGTAATCTACAAAAATGAA
ATAAGATATAACTCTGTCGAGGTGATAAGATGGATGTTTTTTGAATATGA
AACAGTTGAAATTGTATGTCCTGGCACATCTGTAAATCAAGTTTGCCTCA
TTTTAAcgatatcactcaaaaaaattgaatattcgTATTTTGTTacgaaa
atgataaaattttgagttaCACATTTAAGGCGAAAAATAAAACCAACAGC
AAACGCCTGATGTTTTCTATATGCTTTCTTATAAACTTGGTATGAAAGAG
TAGACTAAAAAAATGACCGTACGTGTGACCCCAAATAACCCTTACGGTGC
TTTTTCTTGAGAATTTTTGAGGGCAAAGTATGGTCaccttttccaaattt
taccacccttagagtgcaatttttctcatctttgctcattttgaCCCNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011282TCONS_00011282Clytia hemisphaericatranscript
TCONS_00011283TCONS_00011283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011283-proteinTCONS_00011283-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000124supercontigsc0000124:535840..539288 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.46	7.46	4.18	3.63	185.54	123.35	94.97	104.77	44.86	66.77	33.7	25.59	18.39	16.97	18.18	16.7	33.39	27.1	24.02	22.05	59.66	52.24	37.64	37.63	38.21	37.61	19.42	14.02	21.31	20.37