XLOC_005914 (gene) - C. hemisphaerica

Overview
NameXLOC_005914
Unique NameXLOC_005914
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000107:247579..253387-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005914 ID=XLOC_005914|Name=XLOC_005914|organism=Clytia hemisphaerica|type=gene|length=5809bp|location=Sequence derived from alignment at sc0000107:247579..253387- (Clytia hemisphaerica)
GATTGAATTAAACACCGACTTTAATATGCATCGGTTTATCTCAATGGATG ATCCTACACGAAAGCTGAATTTCATCCGTACTGGGTGTAAGTACAGTCTC TAAACTCGCACTCAGCCCCTTAGTTCGCGCTTTCATGATTCTGACAGTTT ATCATTATAACCAAATAGCGGTGCAAGTTACTCGTAGCACGAAATGGTGT AGGTGTAATCTTGAAACAACAAGATATTGACCCCTTGCAGATTGTGTGCA GGTTTAAATTATTTCTCTTGAATGTCCGCTGTAACTCGTTTTTTTCAAGC AAAAAGATACTTCATACAGTTCACGCTCTCTAAATCGACGTTATATTATT CGATAGGTTCTCCTAATCGATGAAATTTAGTCCCCGTCAACAACAAGAAA CTCTGTCAATTTTATTTCCATATTCAGCTGACGCTCTCTTATTTAGTTCT ACTTTTCGATGCTCTCCATTACTCGATAATATTGAAAAAGCCATCGTCAA CGAACAACTCTCATAAACAACGCTCTACCATCCGATACGCTCCCTCATTC GATGAAAATCCAATTCCCCTTGAAGATCGAATTAGAGAGCGCCAACTGAA CGTTTGAAATATTATCATCGAGAAATCAAAACATTAATTTTTCTCGTATA TGTAACACATACGGTGAAGTTAGCTATTATAACTTTAGATTTCTTTTTAT TAGAACAAAGACTTAGAGACTTTTTATATGATATAGAAAGAAGGACGTCT CTATGCTGACAAAGCAGAATAAACAAAAAAATTCTAAATAATTGAACTTG TACGGCACCGAAAGGGGAGAAAGTAATGGAGGCGCTCTCCACTGTAGAGC AATAGAAAAATTATGGGCTTTTCCAGAAAAAAATTGAACATGGGGGGGGG GTGGAGGATATAACAATTTTCAGTGATTTACCCCCCGGACAAAGTGACTT TTGGCCGCCCGGACAACGGGTTTTACTCCCTGGACAAACATAAGTTGACC CCCGGACAACCCAAATTACCCCCAGACATAGCAAATTTACCCCCGGACAA GGCAAATTTAAATGATTTTCGCTACCCCCGGACAATATATCCTCCACCCC CATGTGCGAACATTTTCTGGAAGAGCTTTTTTGACATTTTATTCTTTTTA TTTCAGTTGGAACTTTCGATGTTGGAAACGGATTTTATTTAGGGAAAAAA ATCGTTTTCCATAACGTGGGATATTTTGTCGGGCCGCAAACTCAACATTT ACCAATAGATGCTTACAACTACATAAACTTCACAAACATCCGTAAGTCGG TTGATGAGTATTGCGAGTTTATCACGAGGTGTCACGTAAAAAGTACTGTG TTAGACCACTTCCACTTCAAATGTATGCCGACTTTTCATATCCCTTTTCG GTCACAAGTCATAGCCCTTTGAAATAGGTCTATTTCGACCCATTTTATCA ATTTATCGCCTTTTTTTGGACATATTAAGAGGGCTGTGGAGATGAAAAGT CATCCAGAAAAATCTGAATACACTTGTAAAACCAGCTATTGTTCAAAGTT TCAAAAAAATGAAAAAACAAAATTTTTAGTCAATTATAAAAAATCTTCAT TTTAAATTTTCCAGTTTCGCGAGGCAGGAAAATTACGAATTCAATGTAAA AATCTTTTTCGCGAGCATATATTGGTAATTCTAGAATTGCTTTTTGTTTG GTAGAAAGTACACCAATCTAATATCGTTGGATCCGTGGTAATTCAGGTCG GATAGCGGGCCTCCAAAAAATAACGCATAGGATAGCTAAACTTTCTCATT TCCGGCAAAACTTACTTATTACCACTTTACAACGGTAAAAGACCAAGAGC TACGCATTTGTACGCAATAAAAAAAAATTTTGTCGTTTTTTTTGTCAAAA AGATCCAAAAATGCTTCAGGAATGTTTCCCGGGAATGAAGAAAGTTAAGA TATCCTATGGTATGCTTGGGTATTTGACCAAGTAAATTATCTCTTTCAGC TGGCGCTGTTAAAGCATCGGCTTGGACATTTAACCAAATAGATCTTGAAG CTGTTCGTACGTTAGGACCTCCACATTTCCAAGGAAGATATGATAATTTC CAAAGCTATAACTTTGATGGTAGATGGAATGATTATTCAATGATGTTGCA GTCGTTCTTTGTACCACCAACGAATGGATTATACCAATTTATCTTGGTAT CGGATGACAACGCCAAACTTTACATATCAAATGACCATCAAGAAAGTGGC AGATACGAGATCATTCATAATACTGAATGGGGCCCCATTGATGACTATAG GTACGTTTGTTAACTATGACGTCATATTGCTCACTTTCTGCATCAAGAAC TCTTTTTCACTTGGTTTTTACCCTATGAGATAAATCTTTTTTGAAATCTA CATCAGATTTCCGATCCAATAATGTATAATATGACCATATTTGTAAAGGT TGAAATTTCACCTGAGCTTGACCAGTCTGACGTCTGATGACGTCACAAAA TCTTAAAAAGGTCTGGAAACGAGTAAAGGAGGTGGATAGGGAATAGCCAG TAAAACTTTTCCGAATCGTTTCATGTCATAAAACAAGTTCCAAAAGATTT TAGATTCTTCACACTAAGATTTCAAGTGGTCCAGCAACCTGACTATAAGG TTAACGGTTTAATACTGGCTTATCTTATAAAGTTTTTTCGACTTTATAAA CCCGAGAGTGCCTTCAAACTCGTATACAGTTGATATAGCCGATTGGTAGT GTGAAGGTTTTGAACACAAACTTTCACCGCAATGGACTGTGTTCGAATCC CAAGCACTGTCAGGCAAGATGTTAAGGAAATATGGTCATAGACTCTCTAC CTTCACTCATATATCATTTTCTCTCAATCCGGCTGATAATCGAAGTATCG ATTGACGTCAAATGAGCTTAGTAAAGCTCAAATTGCGGATGTAGAGCGAT AAACTCGGTAAACATCGTAAACAGTCCTTAGCTTTCTTTTTTGAAGACTC TGGGTACGAGATATTAGAGTGCCGTGGCTATATACCTTCAAAATTACTAA CTTAAGGCTATAACTCCTGACCACTTGATTTAAAGGGACAAGTTTGAGCT CATCCCGATTTAAAAGGGCACAAACAAGATGCCTTAGGAAAATGGAGGTT TTGGCAGGAAAATTTCAAAAAGATGGGGGGGGGTCATTATAAAACGTTAT TGGAGTGATTTTTGCAAAGTAATCCCGATACAATTAAGCACAAAAGAGTA TCTTTCCAATAGTACCAGAACTATTGTCTAACTCTCAAGTTAAAAGCTTA AATGTCAGTTTGAAAATTTTCACATTTTCAAAAAAAGTTTTGCCATATGC TGTATGGAAGGAAACAGTGGATTTGGAATAGGAAATTTCAAACGTTTGAT TCCATTATGGCCGATTTTCTTTAAGTAATATAACCACTTAGGCAAAACCT TGAAATACCTCGATCAAAAGGACTGTGATATTCGTTCATCGATTTATTTC TGTATCGGGGAAAATTTGACTGACGATACTCTCGAAGACCTTGAACGCAC TTCCTTCCTCGACTGTATGTAATTTTGCGGCAAAACATATTTTTGTAGGG TTCATACGATAGATTTATAAAGCCCGAAGGGGCTAGATGTCGTACGTTTG CTGAAAAGTGTGCCGTGGTTAGGTAGGAAATCCTACCTTGGTCACGTGAC ATTACAATAGAATTTCAGCGCTTGACCAATCAGAAGCTTCGCGGATTTTC GAAAACAATCCCCCCCGCGGGGTGTAAGAACAGATCTTTAAAGCCCGAAG GGCTAGATTTGGGGCTTCTATCGAAAAGTGAAGCCTAGTTTTGGAAGGAT TTCCTACCAAAGTCACGTGACTAAAATATGCAATTTCACCGGTTTGAGAG ATGTGAAATAGCGTTTGCCGCCTANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTGAAATAGCGTTTGCCGCCTACTTTTTTTGATCTC GCGCTCCGAAAACAATTAAAATGCTAGATCCTATCCATCGGCACGAAATT TAAAAAGTCAAAATTTTGCTTCACTTTTTTTTGCTGGAGAAAGCTTAAAG TTGCCTATCTAGCCCTTCGAGCTTTACAGATATCTGTGGGTGTAAGTAGG TGGTTTTTGAATTTCTTTATCCNTTTTGCTTCACTTTTTTTTGCTGGAGA AAGCTTAAAGTTGCCTATCTAGCCCTTCGAGCTTTACAGATATCTGTGGG TGTAAGTAGGTGGTTTCTGAATTTCTTTATCCATTCTAGCCATCGATCAA GTCAAATCGAACTGGTGGCTGGTAAAGAATACTATTTGGAAATCATCGGT CACGACAATAGTAACGATGAATATTTTATTGCTGGTGTTATTCTACCAAG TGGTGAAGTGATCGTACCTATAACATATAAATATCTAAAGCCATATTGGT GAAGTAATGTAGACCCGTCTATCTGAGTCACCGACTTATGCCGACTTTTC CGACACAAAACGTTGTGTCAACGTTCATCTAACATTTATGAACCTTAGCT CTAGACCTTTAGACGGTCGACTTTATGTCCTGTCTATCAAAATTGTTAGA GTAGTCAAAAAGTGGGCAGAAAGTTGACAGCTAAAGATTTTAATTGATGA AAAAGATTAAAATGATCACTGCGAAGAAAGATAATGGTCAAAAGAACAAT AATGTGGAAAAGCCCACACATACTTTCTAACCATCTTATTTGAGAATAAA AGTATGTCCGGAAAGGTGGAAAGCGGAACAGATCCGAATCCGAAAAAAGT ATTTCAAAACTTCCGGGTTGGAAAGATTATTAACGACTTTAGCAAGACTT TCTGGTTCAGAGTAAACTGTGGTTGCTGTGGTTTCTACGATATCCCTTTT CGTACAAACACGCACAAAAGCTTCATTAATACTGATCAGGCTATTGGAAT TAAACACCCCTGTCTCACAGCCCCGGTGGAACTTTTTTCCTCAGTGGGGA TAACAATTTCTAGTGAAATTCCAATGGAGATAGAAATTCCATTTATATAA GGTTAAAAATTTCAGTGGGGATGGTTTTGGAGTGACACTTTTAAACATTG AATTTCGAATGGGGATGAAATCAAAGTCTATTTCCCACTGGGGCTAAAAT TCAAGGTATTTTTCAACCGGGAACGAAATTTTAGCCAAATTTTGGGGCTG GGATCTCAGCGGGTCTGTGACACAGGGGTGTAATTGACATGGAACGTTAA GAACAAAGAACAAAATAACAATCGGATTAGCATTAAAACGATTAAATAAT TTTACGAGTAAAAGTACATAATGAATATTTAGTGGTGATGAGAACCAACG TCAAAATTTTACCGAGAACTTTTTTTATAAAATATCACATCATCCAGTAT CCAACCAGGATTACTACCGGTAGGATAAAGTTGATTTGATATTTCGGGAC ATTTGCGATCGTTATCCTAAAACAACTATAAATTTGTAATATCGATGGAC GAAATTGATGGACCCCTCAAAGTATTCGAAATTATGTTAAAGGTTGTTTT TTTATGTTGTGTTGTTTTGAAGTTTGTTTATAATATGTTTCAGAGTTACA TTAAGGAGGATATTTCGTTGTAAATAAAGTATTTTATAAAATATGTAAAA CATTTCATTTTAGTCGGCTTTTGGAAGAATCCCTAGTTTGATTCGCAAAC CTCTATAGATATATCTCCTATAAGAAACTTTTTTCGCTAGAGGATGAGCA GAAGCCTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010549TCONS_00010549Clytia hemisphaericatranscript
TCONS_00010548TCONS_00010548Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010549-proteinTCONS_00010549-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107supercontigsc0000107:247579..253387 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.18 0.38 0.39 0.46 0.45 0.58 0.78 0.34 0.65 0.64 0.4 4.45 3.33 3.12 2.57 1.55 1.94 8.63 7.88 3.07 2.86 1.24 1.62 2.22 2.9 1.13 0.64 0.28 0.35