XLOC_005911 (gene) - C. hemisphaerica

Overview
NameXLOC_005911
Unique NameXLOC_005911
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000107:128964..131138-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005911 ID=XLOC_005911|Name=XLOC_005911|organism=Clytia hemisphaerica|type=gene|length=2175bp|location=Sequence derived from alignment at sc0000107:128964..131138- (Clytia hemisphaerica)
GTTAAAGATTAAAAATTGAAATCAAATATATATCAACGGAAAAATATGTC
CGCAACTCGAAGCTTACAATCCGCAAAGCAAGCACTTCGGAAAGATCTTA
AAGCTCGATTACGAAAAATGACTAAAGAGGAGCGCATCAACCAATCAAAA
ACGATCTTCGAAAAACTCACTTCGACAGAGGTGTTCAAGAAAAGTCGAAC
ACTTTCATTATACCTTAGTATGTCATCAGAAGTCCATACAAACGATATAC
TTATGCATTGTTTCGATACCGGTAAAAAATGTTATATTCCCCATTACACA
GAAGATTATATGAAAATGGTTTTCATCAAAGACAAGGCTGATTATGATAG
TTTGCCTTTAACAGCCTGGAACATCAAACAACCAGCCGACNTCACACGAA
ATACGACTTAGAAGTGATAAATGCTTTCTGAATTTGATTAAAACTGGGTA
TTTTATCACTTTATTGAGGCTTTTGAATGCTACAATTACTAGTTTTTATT
TTGATTTCGAAGCTTTACAGATTTACCGCCTAAAGTAGATCTCTCTTTCC
TTTATCCTCTTCCTATGTAGGTATTTCTTTCATCTACTCATGTATTTTAT
AGGCACGCTTTTTTTGTTCGTCGTTTTTCAAAAAAGTTCCTTGGGTAAAC
TCATGACAGAAATTTTCTCTAAAAATATTGTATACAGTACACGAAATATA
ATCTTTACTTCTTTATTGTAGTTAAAGATTAAAAATTGAAATCAAATATA
TATCAACGGAAAAATATGTCAGCAACTCGAAGCTTACAATCCGCAAAGCA
AGCACTTCGGAAAGATCTTAAAGCTAGATTACGAAAAATGACTAAAGAGG
AGCGCATCAACCAATCAAAAACGATCTTCGAAAAACTCACTTCGACAGAG
GTGTTCAAGAAAAGTCGAACACTTTCATTATACCTTAGTATGTCATCAGA
AGTCCATACAAACGATATACTTATGCATTGTTTCGATACCGGTAAAAAAT
GTTATATTCCCCATTACACAGAAGATTATATGAAAATGGTTTTCATCAAA
GACAAGGCTGATTATGATAGTTTGCCTTTAACAGCCTGGAACATCAAACA
ACCAGCCGACGATGATGATCAAAGACTAGATATTATGGATAAAGGCAATT
TAGATTTAATTATAGTTCCTGGTCTGGGTTTTACACGCTCTGGTTTGAGA
CTTGGGCGTGGCAAGGGATATTATGATAATTATTTTCGAAAATATGAAGA
GAAATTTGGACAGAAACCTTATCTTATTGGTTTAGCGTATTCATGTCAAA
TGGTTGAAGATTTGCCGGCAGACCAATTTGATATCCCGCTGGATCAAGTT
TTATTTCCGTAATATTTCGCCTAAAACTCTAACCCGAAAGATGTAAAGAC
GAATCAAGGGAATAAATTTTTGTTGACCTAGAAAAATCTACCCTAGCAGT
TGGGTTGGTCAAAATCAAAATTTACATTCATTTTAGATATTAAAAAGTCA
TCAACCACTAGGCCGCTAGCATCCTCTCGGCCTTCGGCCTCTGAAAATTT
TGAAATTTTGAAATTTATGTATCTCTGAAAACCAGATGAATTCATTATGT
CGTGCGGATGCAGTCTAGAGTGAGACGTTACTGGAGAATTCAGGCTGAGT
ACTTGTTTAAAGCTTATCCCTCAAAGAGTAAAGTTTGGTATCTTTCTGCA
ATGTTTTTGTTGTTTTTTGTGAAAGAGGCCAGTAGCGTAGACTTAAGGGG
AGCGCAAAATATATGTAGGAGAGCACATTTTTATAACATAGTACTCTTAG
GTTCCAAATAAAAAAATTTTCAAAGAATTAACAAGCGGGGGGGGCCGTTT
ATTTGGAACCTAAGAGTAATTATATTTTTATGTTATAAATAGATAATTAC
AGTGTCATAAAAATCTGCTCTCATACACAAATTTTGCGCCCCTCCTGTCT
ACGCCATAGCGTCAGCCCCCACCCTAAATTTTTCCCAAAAGAGGAGGGGG
CTGGAAGTACACCACTTTTTTTGGGGGACCTATGTACTTGGGGGGAGCTA
AAATCTTATCACTTAAAGTGGTGGCTAAAATAATTCAGCTTGATAGTTGG
CTACAATTACTCAAATTGAAACTCATGAATCTGAAAAATTTTCCCCTGCG
GCGCAATATTTTTGTAAAAAGTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010542TCONS_00010542Clytia hemisphaericatranscript
TCONS_00010541TCONS_00010541Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010542-proteinTCONS_00010542-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107supercontigsc0000107:128964..131138 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ST20-MTHFSST20-MTHFS protein Homo Sapiens
MTHFS5-formyltetrahydrofolate cyclo-ligase isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.16	20.64	9.98	8.97	8.48	6.53	12.45	13.7	10.1	8.55	5.25	5.76	3.23	2.67	5.33	7.43	6.09	7.6	1.7	1.98	3.63	2.47	25.97	22.82	6.63	7.23	2.58	1.57	10.6	12.47