XLOC_005492 (gene) - C. hemisphaerica

Overview
NameXLOC_005492
Unique NameXLOC_005492
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:441431..448423+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005492 ID=XLOC_005492|Name=XLOC_005492|organism=Clytia hemisphaerica|type=gene|length=6993bp|location=Sequence derived from alignment at sc0000099:441431..448423+ (Clytia hemisphaerica)
TCAGACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAG ATTATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTCTGCTGCAC TGTTTCAAGCAAAGGTTAGTTAAATACAGCAGACTCTCTctgattcgatt ttcaaggggctaacaattttatatgaattaaatattcgaattacaaaaag tAATTTAACCTACTGTCCAGCAAAGTAGGTTCAACATttcagttcgaatt acagaaagattcgaataatgtaggttcgaattagagagagttgactgtaa ttAGGTTTATTATACCAATAGTGATGATGACGATTAACAGAAAATGTCCT AGGCTAGTGAACACACGAAATGTGATTGATCGAAACACACTAGCCTGTCC GCTCGTGTAGTGTAGTGAAAACTTGTTGAACGGAGGTTATACATCACGTC TGACACTCTGGCTACGTTGTTTACTGTttattgtataattttttataata aacTTAGGGGGGAAGGAGCCTTGTAATATGATTCTAGCGAACTCAGATCG AGGCTTCTCTCAGGGTTTCTAATGCTTTGATGGATGGgagtttttaaatg aaaatttttttgtgtcCTGGGACGGCAGGGGAGATCAGGCTACGGTATCT ACTGACTTCCCCTTCCTTCTCTATCCCCTTCTTATTTTCCTTTCGATTTT TCTCTGTATGTTTGAAAGTATAATTCGTATCTATAATCCATCCATAGGAA TCGAGATCTCAGTGATCACACCGTTTGAAGGACCGTTTTACGAGGTTGGG CAAGAAGTTATGATTATTTGGACAATCGAAAAGAATGggaaatcattttt ttatcGAAATGCCGTTAATTTCTCTATCAAAAAAGATGGTATCACAACAG ATTTGGATATGTTTTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGAT AATGTTTACATATGGTTTGGTCCTTCAACAATTAATGTGTTGATACCAAA CCTTCGGTACAACGATACATACGAATTTATTTGCCAGACAGTTCTCACAC TGGAGaacaaagaaataaagaaatccGTGGTCTCCCTTGCAAAAATTTAC GGTAATTCCAGGTTTATttacaagaacaattttataagagcacgaactta attttgttgaaacttaagaaaaaattgagaataatcTTCAGCCTCAGATT TCAAGAAAGAGGATTATTTTGATCCATTGTGATCTCATCTAGAAAAATTG GCCCCGATTCGTCTCTGGTCGGAAAGATACCCTAACATATAAATCCAATT GGATGAGGACACACGCTCATCTTCAATAGTGGAAATTAATCGGTAAAAAT AGAGTTTAAACTCCCCACCaaataaaataagaatttcCGATCCCCATTGG TATTTGGTTAAGACAGGGTTGTATCCTGACATGTGAAAGTCATCTTCTCT ATGCAGTTGATGTCTTTtaaactcgaacctctataactcgaataagTTAA CTCGTTCCTTCAGTCCAGTTAACAATGTCATATAAACATTACTCTgtaac tcgaaatttctttaactcgaacaaatttgtgctcCCTGGAGACTGCACTG TATTCAGTTTTAAGACAGATGTGTAACCAAGATTGTTAAGCCAACTCATT ATCTCTACAATGACACAGGTGGTGTTAAAAACTGTGGCATCATGCAATTT GAAGATAGATACATCTTTACAGAAAGTTCATCTCCAACAATATGGGTGAC TTTGTGTGGAAATCCACAACCTGATTTGAAATACACGTGGAACGGCGAAA CAAGGTAAATATTGAATTtagcggtttctttgttttcgagtggtatattt tttgaaatccagcgaaaaattttactttcaatccggaaTTTGTACAAAAA CCCCACCGGCCAATCAAGGCCGTTCAATTTAGATAGACTTTAGAgccttc aaatcctaccaaggagattcgtttctagcccttcgggcttatatttCATT GGGGTTGACCCTCTACTAACAATCACCAGTTAATTCTCTTCAAACAGGCT CGCATCTTTAGGCGAAACAATCGATTCAGAAACGAAGATGTACAAATATG CAATGGAGCTGGAAAACATCAGTAGAATGCATTGTGGTACACAAATCAAA TTCGTTGCCACTGGATATGAAAGATTGGAAAAGACAGCTAAAGTTTATGT ATTGTGTAAGTTTTTGTTGCTACTTTTCGAGAAAACAGCTAAGATGGATG TGACCTTCTTTCTTATTAGTCGaaggaaaaataaagattttcatttattc CGCTCAGATACGTAACGGTTGACGAAGGTTGACATAAAGTCAATATTCAT CTCTTCCCCAAGCAAAATTAATGAACAATATCGAAAACAATTAAAgacaa aaatgagaacaatGCATGTGTATGGGGACCACCCCTTAGCAAGATTGTAC CTTTAGAATTAACCTCAATAAGAAAGCgcacaaatttaaaaattcagcTT GGCCAACCCAAACCAAACccaaaaagttgagaatatacgaaggcttcaaa aattttggatgttcttataaaaagaacgtgTAAAGCGAAGTTCGCTGAAG TTTGAATATGTTTTTCATTTAGATAAACCTGATGCAGGCGATTTTGAAGT TGTTAAAGAAACAAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACA ACTTCCCTAACTTTAACACAGGATGTCGAGAGCGTTACAATATCTATTTT TTTGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGG TTTTTATGAATATGAAGACTGCAATCACCATACATCTAGGTATGTCGAAT TTTGAAGAGCTTTTTGTGTATTTGTTAATTTCAGTAGAAACCTTTAGAGG CAGAGAAATACTAAATGTTAGATCTTTTTGAATGTCAACAAAGCCAATCT GGTTGTGTTGccagttttttatcaattctGTTTTGCTTCTTTATACCCCG GGGTGTTTGGGCAAAATAAGGTACGGGATgtaccgctggtcagggtacct ttttcacctccatgagtcccaggtagggtcgcaaaaaaacactgaaatag aaaaatcagtccctcgtggGGTACCGTTTTGAGGAAATTTGATgggaaaa aattgagaaacttttggcatttcagtcccattcagtcctattcattaaaa aaaacgagtcccGCGTAGGGTTTATTTTTTGAACTTCAGCGGCACACCCC CATCGGACGGCAAGGATAGCACACCCCGGGTTTTATAATACTAATTCTTC ATATTCTTTCAATTTATCAACCACTCCCACAATGTTTAAACTTAAAAGCA AAGTaaataccgttgaaaagataacatTTCAGAGCATCATAACATGCGCT TAAAAATGACAGACAATGACCCCCCGGGGGGGGAGGTACTTGGGCAAAAT GAGTGTGTCTCTCTAACGGTggacaaaatttttgataatttgccTCGGAC ATAACCGTCATTTCGCAAATCTAGTACCCTCCTGGGAAACGGAAAAATgt agaataatagtttttataCTCTTTTGTGCTGGAAAGTTTTATGCTGTGAA GGGGTTAAGTCTTATTTTGTTTCACGTTGCTTGATTTAGATACTCCTTCG ACGACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACG GGAGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAAAATAGGTAAGAA AATGCTTTGAAGTTTATTAGAGTGATACTTTATTAAGTATTACAAGAAca tactatataagaacaaaaggcttcgatggccaaaatattgagaacaagtt aaggacatgggatttcaaggcttttgtggcctctaaaacacccgatttct tagggaaaTTGGCAAAAACACTCATAAAATAGTGAAgttaagaacacgtt aagaacatttttaggcttgaaactctaaaatttaagaacatccgaaagcg tCAAAAAttatggatgttcttataaaaaagtgtactaAAATTCTTCTCAG ATATTCATAGCATGTctttaaatgtacatacttaCCTATACAGTTTCAAT AACAGAGGCCACACAAATTTCGGTTTGAGCCCTAACTAATTattgaataa tttgaatttattaAATTTAACCATCTTTTAGGATACCTTAGGGAAATATC AAAAGTGTTAGAATTCTACCCTGTGCTTAACCCTCCCATACGATAAATGA TGGcgtaaattttacttttttttagttttagagaACGGACAAAGTGTTGT TAGTCGAAAAAGCATCATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTG TGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTGGACACATTGTTCAAAA AATATCGAAGGTTAGTCAATTTACAAAAGCAGCCCTTCGTAAAAGCGAAT CTTtgacctttctcaggcaagaaaaagtgaagccttaggAATACACGCAC TTTTTTGACGACGTGAAATATTTACTTTCAATCTAGAATTGGTATAAAAA CTAAGTGGACCGCTCAAGGCCTTAGGTATGATTTAGTGGCTTCAAATTCT ACGTAGGAGATTCacttctagcctttcgggcttttaCTTCCTTGTACAGC ACCCCAAATGTATACAGCGTTTCATTGTTTCCACTTTTTATGCAGAAAAT CATGCCAAGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACACAGAAGA AGAACgagaagatgaaaagaaaactgaTTCCAAAGAAGTCTTCTTCTATC AAACAAAACCGACAGCCGTCAAAATAGACGATTTATTGTGAAAGcgaatt ttcaaaatgtggAAGATATCTCTGTAGAaggatatttcaaaaatttacaa tttgtaaAACGATTTTTAACTTCATCATAAGTGATCCTAATTTCTTCAAC CTATGAAAAGGGACCtgttcccggggggggggggNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCGTAGGGTTTATTTTTTGAACTTCAGCGGCACACCCCCATCGGACGG CAAGGATAGCACACCCCGGGTTTTATAATACTAATTCTTCATATTCTTTC AATTTATCAACCACTCCCACAATGTTTAAACTTAAAAGCAAAGTaaatac cgttgaaaagataacatTTCAGAGCATCATAACATGCGCTTAAAAATGAC AGACAATGACCCCCCGGGGGGGGAGGTACTTGGGCAAAATGAGTGTGTCT CTCTAACGGTggacaaaatttttgataatttgccTCGGACATAACCGTCA TTTCGCAAATCTAGTACCCTCCTGGGAAAcggaaaaatgaagaataatag tttttataCTCTTTTGTGCTGGAAAGTTTTATGCTGTGAAGGGGTTAAGT CTTATTTTGTTTCATGTTGCTTGATTTAGATACTCCTTCGACGACGTCGC GTTTACAAGAGTTCAAGTCATCAGATGGGATGGTCTAACGGGAGAAATGT CAGACTTTAAAAGAGTCAAAGAGAAAATAATAGGTAGGAAAATGCTTTGA AGTCTGTTAGAGTGATACTTTATTAAGTattacaagaacaaactatataa gaacaaaaggcttcgatggccaaaatattgagaacaagttaaggacattt caaggctttgtggcctctaaaacacccgatttcttagggaaaTTGGCAAA AACACTCATAAGATAGTGAAgttaagaacacgttaagaacatttttaggc ttgaaactctaaaatttaagaacatccgaaagcgtCAAAAAttatggatg ttcttataaaaaagtgtactaAAATTCTTCTCAGATATTCATAGCATGTc tttaaatgtacatacttaCCTATACAGTTTCAATAACAGAGGCCACACAA ATTTCGGTTTGAGCCCTAACTAATTattgaataatttgaatttattaAAT TTAACCATCTTTTAGGATACCTTAGGGAAATATCAAAAGTGTTAGAATTC TACCCTGTGCTTAACCCTCCTATACGATAAATGATGGcgtaaattttact tttttttagttttagagaACGGACAAAGTGTTGTTAGTCGAAAAAGCATC ATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATCGTTGTCGT TGTGCTCAGCTGTCGGTGGACACATTGTTCAAAAAATATCGAAGGTTAGT CAATTTACAAAAGCAGCCCTTCGTAAAAGCGAATCTTtgacctttctcag gcaagaaaaagtgaagccttaggAATACACGCACTTTTTTGACGACGTGA AATATTTACTTTCAATCTAGAATTGGTATAAAAACTAAGTGGACCGCTCA AGGCCTTAGGTATGATTTAGTGGCTTCAAATTCTACGTAGGAGATTCact tctagcctttcgggcttttaCTTCCTTGTACAGCACCCCAAATGTATACA GCGTTTCATTGTTTCCACTTTTTATGCAGAAAATCATGCCAAGAAACTGA AGGAAAGTCAAATGAATGAAGAAGACACAGAAGAAGAACgagaagatgaa aagaaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGC CGTCAAAATAGACGATTTATTGTGAAAGcgaattttcaaaatgtggAAGA TATCTCTGTAGAaggatatttcaaaaatttacaatttgtaaAACGATTTT TAACTTCATCATAAGTGATCCTAATTTCTTCAACCTATGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009820TCONS_00009820Clytia hemisphaericatranscript
TCONS_00009821TCONS_00009821Clytia hemisphaericatranscript
TCONS_00009822TCONS_00009822Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009821-proteinTCONS_00009821-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:441431..448423 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64 0.84 0.55 0.77 0.49 0.26 0.27 0.22 1.19 0.61 1.58 1 45.17 68.38 0.48 0.22 0.09 0.05 233.96 143.8 0.22 0.17 0.55 0.35 0.19 0.14 0.04 0.04 0.34 0.41