XLOC_005410 (gene) - C. hemisphaerica

Overview
NameXLOC_005410
Unique NameXLOC_005410
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000097:544996..546061-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005410 ID=XLOC_005410|Name=XLOC_005410|organism=Clytia hemisphaerica|type=gene|length=1066bp|location=Sequence derived from alignment at sc0000097:544996..546061- (Clytia hemisphaerica)
GAGAGACAAGCAGAACAAATTTTTTGTTCAGCATGATGTGTGGGTTAATA
AAAGTATTATTGCTGTTGGTTTGTGTATCTGTTGTGTTAACAGCACCAGT
GAAAGTTTCTCAATGTCCGAAGAAATGTACTTGCCAGCTTAGTGGAACTT
TTGTCCAATGTCCTGGCAAAGTCACAAGGAAAGATTGGGAAAGAATTGGT
GCAGAAATAAGTGAGAATGCAATTCAATTGGAAGTTGACTTTCTGGATTT
TGAATACGTGCAAGTACATTGTTTTAAAAAGTTGAAGTCTCTGACGAATT
TGAGGATACTTGGTGGACGAGTTGTTTTGTTTCCGACAGGTTTATCAGAC
AAGTTCCCAGCACTGAAGATTATTACATTTATCAATAACAAGATTAGACA
TTTAACACCCTCTATTTTTGAAGGACTGGAAGAAATTCTGAACTTAGATT
TAGCTGGAAATACCCTGAAAAGGATTTCAAAGAATGTCTTCAAAGGTTTA
TCCAAATTGAAACTATTGAATTTGGAGAGAAACCAAATTGAATGTCTTGA
CAATGACGCTTTTGATGGTTTATCAGGTTTAGGATTATTGTCATTGAACA
ATAACCGATTGACAATGCTACCAGATGGACTTTTCAAATCGTTCAAAGAA
GCACCTCTATTTCTATTGTTCGCAAATAATAGAATCACCAGATTACAGAA
AAACTTGTTTCAACCTTTCTTGAAAATCTCAGCATTCAATGTCAGTAATA
ACAATATATCTGAGATTGAAACTGGAGCTTTTGATAACTTGTTACCTTTC
CCTGGTTTTGGGATTGATTTATCACATAATCCCATATTATGCAATGCTCA
ATCCAATCCAACAGACTTCAGCATGGGAAGTATTCGGGTTACCGGAACTT
GTGGTTCAACACCGGTACTCCCGTTCCAGATCAGGCGTATTGTGGAATAA
GCTATCAAACAACAATTTTCTTAAAAAGTCTTTCTGTCGCTTCTTTGCTA
TGGGCTTCAAATATCTTACCCTGAAGTTAAAGATTTTGCGTCGCTTCATT
GCTATGGACTTCAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009674TCONS_00009674Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009674-proteinTCONS_00009674-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:544996..546061 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BGNbiglycan preproprotein Homo Sapiens
DCNdecorin isoform a preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (9.98 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.05	0.05	0	0	0	0	0.42	8.47	0.92	9.98	6.77	3	2.91	1.89	0.75	0.29	0	0.46	0.08	0.18	0.33	0.82	0.13	0.32	0.06	0.06	0.05	0.23