XLOC_005316 (gene) - C. hemisphaerica

Overview
NameXLOC_005316
Unique NameXLOC_005316
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000095:425799..432916-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005316 ID=XLOC_005316|Name=XLOC_005316|organism=Clytia hemisphaerica|type=gene|length=7118bp|location=Sequence derived from alignment at sc0000095:425799..432916- (Clytia hemisphaerica)
ATTTGCTGGTTTGATTTCGGATAAAACAGTTCGTTGGTATGTTTCCAGAC AAATAATAACAGGGATGGGAAATTTCCCAATTATTTTATAATGGTATGTT AAAAAGGCTTCAAACACTTCCGCAATTAATATTTTACTTGCAGATTTGTC CGACGAAAAATTTAATATAAAAGAGACTAAAGTTTTAGCGATTCGATCAA AATTAAACTTTCAGTTGGAAAATTCAACAAAGTGTGGATTGGATCAAGAT GTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTGCAATGCTTTT CATTCAGTAAGTTTTGTATTTATTTTTCACTTAACATTGATATTTAGATT TCTTTTGCTTAAAAAATAGAACCTTGCATACTCTCATTAAGCCCCCACCC CCAGCGGCACCCTTAATCAAGTTATCACGCTAGATTTTTGCTTTCATCCC GAACACAAAAATTGGTTCTGAGAGAGCCTCAATCACGCATCACGCCGAAA TCTTGATCATGCAAAAAAAAGTCTCAATCACGCCATCACGAACACCACTG GGGGACTCCCGATAAAGTTATACTTTGATACTCTTATTTACTAAATCTCG AAAAAAGATATTCCATCAAGTCCCTTCATATGCTATAAACCTTTTCGTAT TACCCTTTTTTTCAAAACTTTCGAAAATGTTAAGCGTAGCGCCTGCTACA GACAGAAAAAGAGCACCTTCCTTGTTTTTTTTTCAAAGTTGAATTTTTTT TTTCATTTTGAAGTCGGTCAAAATCATTCCATTTACATTCAATTCACATT TACAAACTTGAATCTTTCTTAATCTTCCATCTAAATNATTTTGAAGTCGG TCAAAATAATTCCACTTACATTCAATGCATTACATTTACAAACTTAACTC TTTCTGTCCAAATTTAGTTCGGCGCCACGCATGCAATGGGAATTTTCCAA AGAGAGATCCAATCAAATGTTACGGCAACCGACGAATAAACATCATCAGT GCCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATTTGTTTCGTGAT TCCTCAACTTATCAAAATGAAGACATGCCAAGATGACGTGACCGAAAAAA TGCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGAATGCAATGAAA GATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAATAATTTACTTTT ATCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAAAGAAGACCGTA AGTTTCATTGAAAAATTAACCGTATAAAAATTCTAATCCAGAGGGTCAAT CCAATATTCTACTTTCAGAAATCCTCATTATGACTAGCCATAACTTTCAT TAAGGTGCCACCGCAGCAAAACGAACACATAGAGTTGAATTTGCGTTCAA AAGGAATGATCTTAGCCCTACAGTAATTTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGTTTTGGACA CGTGATTTTCATTGTTCTCTTTAATGACACGTGGTTCGCGCAGTGTTTAC ATTTTACTACTGTAATGTCCCTTTAAGATTGACCTCTCATCTAAGACAAA ATTCTTTCAAATGCTAACAAATGTGTCAAGGGAGTGATTTACAGTCTACT TAGAGTGACATCCGTGCCTTGTCTTACACGTTTTTTATAAGAACAGTTTC ATAAGAATACGAGGCTGAAATTTGGCCAAAACCTAAGAACAAATTTAGAA CAATCTGTAGAACCTCAGATTTCATAAATTACTGAGAAGTACTCACATGT TATTTTACTAGTGTACACGTTTAGCAACATAACTGTTCGATTACTTAGAG TAGAGTAATATTTTTAACCTATGAAGAGCGCTTAATAATTACTTGTGANT GATGGCGAGCGAAGCTAGCAAATTTTTTTTGGCTTTTTCGGATATTTCAC CATTAAAGAAGGGGAAGAAGAAAATTCTAGTGGGAGGATTTTTTGAAAGA AAATTCTACTGGGGTACGTTAAAATAAGGGCTTTTCGAGTGGGGTATGTG TAAACTTTTTATCATTTTCAATGGGGTGTTTTTTACTACAACATTCCAGC GGGGTGAGTGATTTGTCCAGTGGGGCTGAAAAATGAGCCATTTTTGGAAA AACAAGCTGGATGCTGATAGGACCTACCTGTTAATTATGAAATATATGAA AGATGACTCACCAGTATCACAGGATCTTGACCTTGTGTTGAATCAGAAGA TGTTCCAACAGGGAAGATATGTTGATGCAGCACACTGGTAGGTGATCCAC AATATATGCAAATGAACCAGCAGCAACAATCAATCAATAGAATAAAACAG TAAGATGAACCAATATCAACAGGAACAAATGTCAACAGTCTATATCAAAT AATAACAGAATCTGTCAGTTACAGCATTCCTGTTAATACAATATCAATAA CAGGATCTGTCTTCCACAGCATCCACACATTGCACTATAATCAGGATCTG TCTTCTACAGCATCTAAACAATTATGACCAAACAATCACCTCGACCATCA CACATCTACTGGATCAGCACCAACGGCGATTCTACAGATTGATGATGTAT TATTTATTTAATTAGTATTGTGTCTATAATGAAAGTAACATTACCTGATA ATGAAAGTTAGACAAATGAGAGCAAATATAGTAATTAATGGAAAAGATCA TGAAACGCAAACGAACAAACAAACGAACGAAAGAACTAATGAGGGAAGGA GTGAATGAAAGAGCGAGGAACGAATGGAGCAAAAAATCATGAATGAAATA TTGAGTAGAACTTGAGAAATTGAAGAAAAAATGTTTTTTTCTGGCACGAA AATCAGCTGTTTTGGAAATTTTTAGAAAATATTGGGAATTACTATCAGCA ATATTTCATGAAAAAAATATCACAATTAAGACCAAAGAAAATCTGGAAAA ACAGCTATTTTTGGCATTTTCGGCCGGAAAAAAAATTTTCTCGAAAATCA GACTCAACCATGTTTTGGGCATTTTTAATACACATCTTTTGGCATCAGTG TGCAAAATTTCATGAAAAAATATAAAGTACAGCTCGAGAAATTTCAAGAA ATACCATTTTTCTGGCGAAAATCGGCTGTTCTGGCGATTTTTAGAAAGTT TTAGTTACAAAATTCAGTTTTATTGATAATTGAACCATGCTTGATAATGG GCATTGTTACTAATAATGTTTTTGAGTGAAAAAATAAAGAAATATCTGTT TATGAAAGTCAGATAGAAATAAGGAGAAAAGTGACAACAATCAGTCAGAA AATATAGCGTTAGCGAAAGCGCAAAACGCATTAAATTTCATCATCGATTG TTGATGGGAGAGAGGGAAGGGTAGTAGAGAACAAAAAAATGAGGCTAATA AATGATAAATATCCACAAATCTACAAAATCTGCATTNTTCAGCCAGAATA GAATTTTTCTCAAAAATCGGACTAATCCATGTTTTAGGCATTGCTAATAC GCATCTTTGTGCAAAAAATCAGAAAAAATTAATGATGAAATCTCGAGAAA ATGCCAAAAAACCGGTTGAATGAATTTTTTTCTAAAATCGGGCTCCGTCG CATTTTGGGCATTACCATTTTGCATCTTTGTGCCAAAAATTAGGAAAAAC TAATGAGCCAATCCCGAGAAAAGCTAGTAACGAACGGACGAACGGACGAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCGAACGAACGAACGAACGAACGAACGAACGAACGAACGAAC GAACGAACGAACGAACGAACACGGGTTAATTTATAGGACCTCCAAAGGTA GGTCCAATAAAACAATAGAGAGACCGTAAGATAAGAATGCTACCGTANTC GAACTCCGACTGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGA ATGGTAAAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGAT TATGATCATGCGGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGG ATTTAAAATGAAGTATTGTTGTCAAAGTAAGTCATAGTTTCTCTGAATAA ACAAAAACCCTTCCCGTCATACTCTTCGAGATCCTTTTCCCTTCCTCCAT CTCTTTGAGTTCTCTATTCATTCACTTTCTACCATGACTCAATACATTCC CTAAGNAACTAAAATACTGAAAAACGCGCGCAAAATTATGAGATGTTTGC CCAACTTCCTTATGCGTGAAGCTATGAATGCCATCCTCAGAAGCTTTATG CTTCCTCCGGTGGCAATGACTCGATTGTAATTAGAATATTTTCCTAGTGT CTAATTATTGCGTGACCAGATAAAACTTCTCGTTTTGAAGATAATTTCTT CTCAAAAGATTAAAGTCAGCGAGATTTGAAACGATATTTCGGTTCAACCG TCCCCACGAATATAAAATTCTTGGAAAGGTTATGTTATTCACGGAATTAA TTTTAAATTTAAAAGTGAAGTTCGGATATGTTTTCTACGGAAACTTCCCG GTTTTTACCAGTAGTTGCAAATTAAAACAATTTTTCTCTAGCTTATATTG TCAACTACTGGTAAAACCCGGGGGTGTTTCCCGGAGAAAATGTTACGTCA TAAACATCATGAAAATCTTTGATAATATTATTTCTATATCGCTTTTAGTC CAAATATGCAATGGTTGCAAAGACGGTCTCAAGAAGGATGTTTCATGTAC AAACGGTCGTAAAATTCACGTCAAATCTGCCAACATCATTATGGTCAGAG AAGGACAAGAATTTGAGGTTTCGAACTCCGACTGCACGTACTCAGTGACC AAAAATTTGAGACATTTGAAGAATGGTAAAAGTGAGACAACGTTTCATCA GCTTGAGCATATGTGGGGCGATTATGATCATGCGGCGTATAGTGAACGTC AAACATGTGATATTTTCCATGGATTTAAAATGAAGTATTGTTGTCAAAGT AAGTCATAGTTTCTCTGAATAAACAAAAACCCTACCCGTCATACTCTTCG AGATCCTTTCTCCTTCCTCCATCTCTTTGAGTTCTCTATTCATTCACTTT CTACCATGACTCAATACATTCCCTAGACTATGTTATAGTCTAAGACGAAT CACGACTATCTAAGAAAAAAGCCCGAAGCCGAAGAAAATTCGCAAACAGA TTTTTTTTACCGAAAAGAGTTTACAGTCGGTAGAGTTGCCAGACTTTCTT CGAAACTCTCCCGCCGATTTTTTCCCCTATACCGCCATAACGCCATACCA CCATATTTTCCCGCCTTTACTATCATTGTAACGGACGATAACATCGTCTA TACGTTCCATCACCTCACATTTCTCCGTATTATGAAAATGATTTATGGGT TATCCAACTTCATTATTATATTCCATCAATTTTTTGACGTGAGAGCCAAC TTTTATAAACCAATCTTATTCTGTATAACATTAAATTTAATTGATTTCAA TCGTCCATTTAACGTTAGATTGACGTTTAAAACAACGTTGTGTGCCAGCT GGGATAACACTAGTAAGAACATTTTAAGCTCAAAACTGGCAAAAAAAATA GCGCAACCGAGCCTAGATGACGCTATCGTCCATTTAGAGGGTCAGTAAAC GGGAGAAAGTATATGCGCAGAGTCAGGGCGTCAGGGTGGTTTACGGAAAA AATAGTGGCGGTAGAGTTTTGGAACACTGAAAACACCTCCGCCACTGTTT ACTACGCCCCGAACTGAACTCCGTTTTCAAATTTATCCCGCCTCCTGAAT TATTCCCTACAGAGCCCAGCCAGGAGTAAGACTTTAAAAAAAGTGTGTAG TACGTTATTCAGATTTGATCTGGTTTGGAATACTTCACCTTGAAAAACTT TTTTATTTATAGCATCAAGTGGAAGCTTAATTTCAGGAACATGCAAAACA AGTAAGTCAGTTTTTTCAAAAAGATTTTTCTACCGAATGTTTCAAAAAAA CCGTGTACAAAATTGAATGGTTTTTGAGTGGTTTACCCCTCGTGCCAAGT TAGGGATATTGGGGCCTAAAGTTTTGTAATTTTACGAGGCTACCTGTTCT TTGTGGGTAGTTAGCTGTTTTGATTGAGGCTCAACTGTATTTTCAAAGTT GATGAATATTTTGCATTGTTAATAAATTTTTAACCTACTGTAAGAGCTCA ATTTCTCGATTTCGTTTCTTTCATATTGGGATACCAAACTCAAAGCAATT GCTCAAGAGGGCCTAAATCTCTGGGGGCACTTTACTTCAATGGGTGCACG GAATGTGAGCTAAAACCATGAAGTGTAATTTTCATCTCACTGTATTTTTT AGTTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTATATGCC GACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTTACGGTA GAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAATGGTTTG CAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAGCAACCACTCT TGTTGGAATATACTTGTGAAGAACATTAAAAAATTTACGGAAAACTTCCG CCATTGTGGAAGAAAAAGTTCAATTTGCAGATATCGCCACTTTGTCTTTC TCAAGCCACGTTTTGCTTGAGTAAGAGACAGAGTAGTTCTATCTTGTGTT TTGTATATAAGACATATGTGAAGGATTCGCCTTCAACAACACCAGAACAT CTACTTCCGAAATGGCGGATTTTCTCTTAGTTACGTAACTTTGGTAAAAG CTGATAAAACATCCATATTATTTCAAATATTTTTTTGTTAAGCATGCGCT GACTTTAGTTTTTTTGTTATGACACAGTAAACATTTTGTAATTATCACCC AAAATTAATTTGAAAAAAAATGATATCATTGCTAAACAAAAAAGAATGTC TCAAAATGAAAACTTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009526TCONS_00009526Clytia hemisphaericatranscript
TCONS_00009525TCONS_00009525Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009526-proteinTCONS_00009526-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:425799..432916 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.27 0.22 0.31 0.04 0.06 0.22 0.28 0.32 0.03 0.26 0.08 3.66 3.28 0.08 0.26 2.49 0.8 10.89 14.17 6.72 6.63 1.98 2.94 6.74 8.91 0 0.08 0.06 0.16